Cp4.1LG06g03400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g03400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ER membrane protein complex subunit 7 homolog
Location	Cp4.1LG06: 1786588 .. 1790102 (-)
RNA-Seq Expression	Cp4.1LG06g03400
Synteny	Cp4.1LG06g03400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTAAAATCAGGTATCCGTTCTTTCTTTCTACAACACTCGGCAAAGAACAAGAAGAACCGCGAGATCTTCCCTGTTCCGAAGCTCCCGCCATTGCAGAATCTTCAATAATGCGATCTCAAGTTTTCATTCTCTTGCTTTCACTCCAATTATTCTTCTCTCTGTTATCTCCGTCGCATGCGATTTCCCCTGGGTAGGTCTCAGTCCTTGTCTTTAATTCACCGTGACTTTGTGCTCGGCTCGTCAGGAACATGAATTGGTGAAGATTGAAACTAATGATCGACGATTCCGTGGAACTAGAATGCGTCATTATTACTTTCTATTGTCTTCTAATCTCGTTGTTGCATTTCGCAGGTCCGGCGATGGATACACTATCTATGGTCGGGTGAAAATTTCAAGTACGTTGCTTCTTTTTCTTATTCTACAAGTTGTGAATGTATTTTGATATTCAGCTTCGAGGTAGTTGTAGATTTGTTACTTCTTTTTGTAACTTAAAGAAAGTTATTCGTTGGAAAACGAGAATTACAGAAGCGAAGTGAAGTGAAGATATCTGAACCTAATATGGAGGAGATTAAAAAGATTCTTCCGTTGGTATTGATAATTACCAGAAGTACTTCTTAGTTTGGCAATGGAAGAAATATTATCTTACGACTGACCAAAATTCTACAAGTTTTGAATAATTACCAGAATCTTTTTCCTAATGAGCTAAATTTAAATTACTCTGAATCTTTCCTGCTATAGATTAAAAAAGTCCTTACTGCTAGGGTCTCCTGGAAGGTTAAGGTATAAGTTGTGAGCCAAGAATTGCAGCATGACCATAGGACTAAGCAATGTGGATCCTTTATCCTTAATATAAATTATTTCCCTCCACCATGTACTCGAGGTCTCCACATGAAAATAGTGATGCTGCTTTGATAATTCTGGAATATATTATCTGCATCTGGGTGTCGTGTTAGCATAGATTTGAAACGAGGAAAAAAGATTTGCAGACCCCTACCTTACTATTGTAGGTCCTCATAAAGCTCTCCTTTTGGAGGAGAGGCAACACAACTATGTTTCTTCACCCCTTCACATGAGGCATGTACGCACCTACTTTTTACTTAGCATTCCTCTTACTTTTGTCCATATTGAATCCCTAGGGGTGACTAGTATGTTAGAAAAATCTATCCGCTTTACAGTTCTGCATTGCGAAGATGAAAATGTTCAAAATGAATGTTATATTTGCTTGAGATTCTATGTTTAGATGATTGTCGTTGTACTATGAACTAACGCATACTGTTGAATTTTTGGCAGGGAACGCACTTAAAGAATATGGACTTCCTGGAAAAATATCAAACATTAAAGTCATACTTAATGGTGGACAAAGAGTTACCTTCCTGAGGCCCGATGGATACTTTTCATTGTATCCTCTTTATGTTTTAGTTAATTTAAAATGCTTAAAGTTAATGAGTTTTATTACTTTTAGGCTTGTTTCCGCACAGGATTTCATTTTCTGCTTTGCTCTTTTTGGGACTCGAATGATCTGCTCGGATCATTTATACAATCCTCAACTGGATGTAGCATTTGATTTTATTTTGTTCTTTGCTTCCTAGTGGTTAGTGTTATTATTATTTTGGATAGTTAAGCTAAAAAATTTGGCCTTCCAATTTTCTGAGGTTTCTGTAATTCCTTAACTTCAATTCTTACAGCTATAATGTGCCAGCAGGAACCCATCTGCTTGAAGTGGCTGCATTGGGCTATTTATTTTCTCCCGTGGGTTTTCTTTATCATCCATCGGGTATCAGTTTTTCTACAAATCTGGTTTCATGTGACTCTTTTTTTTTTTCCTTTTCTATTTATTCCTTAGGTTCGAGTTGATGTGAGTGCCAGAAACCCAGGTAAGGTTCAGGCAGCCCTAACAGAGAACAGGCGGGCATTGAGTGAGCTTGTTTTAGAGCCTTTAAGGGATGAAGAGTATTATGAGGTTGGTTCAACCTAAGCTCCTCTTTTTTTTTCTTTTTTTTTTTCCCTCTTTTTAAGGACTATAAGTTATTGAATTTTATCTTTGATCTCACATTATTACTCAATCTCTTTGTATTATAGATTCGGGAACCGTTCTCCATAATGTCTGTTGTGAAAAGTCCTATGGGTCTGATGGTGGGATTCATGCTAATTGTTGTATTCCTGATGCCCAAGTTAATGGAGAACATAGGTACGCACTCATTTGCTCATCCTATTTATGCCTCTAAACCTTTTACTGGCTGTTGAATGGCAAATTCTTGTGCTGCTAATAGTTCTTTCTTCCTTTATATTATTATGAACTTTTTTGGTGTTCATTTGGTCCCTAAATTTTCAAAAGTGTTTAATAGTCAAAACTTTCATTTAATGTCGGTAGGAACCTAAGTTATCAATTTTGTATCGAGTAGATTCATGGATTTCAAAAAATATTAAATAGGTCAATTACCTATTAAGCCCACAATTTTAAATTTAAGGATCAATTGGACACAAAATTGAAGTTCAAGGATATTATTAAATATTTTTTAAAGTTCGAGATCTTGGTGGACACAAAGTTGAAATTTCATGAATTTATTAAATACTTTTGAAAATTTAGAGACCAATAGATACAGACTTGAAAGTTTCGGGACTAATCTCGTCATTTAACCTATTATCGTGTTCTTATTCCATCTTGAGAATATATAGGGTAAGCTGTATTATATTTATATACAAAGGGTTCTATGTTAATTCTCTCTTTGAAATTTCTTTGGCAATGTGTTGATGAAAAATTCTTCCAACGTTTCCACTTTGCACGAGACTTGGCAATGCCATTTCAATTTTATTACTTTAATGGATGAGATTTTCTCATGCCAAATCTGTTGGTGGAAGTTATGTTGCTCTAATTGCTTGCCCTCTCGATGAAATTGCAACTTCATTCGATTCATCATAAGAAATCAAATGGGGAAAGTTCATATTATTGGTTCCACTCCCCAATCAATTAAACTTCCAAATAGAAATGTCTTGATCGAATTCAATTCTTTCATAAATGAATGATTGTCTTTCTACCCCCCAAACCCCCGAAATAAAGGATGATTCTGTCTCTAACTGCGAGATTTTGCAATATTCTGATGATCAGATCCTGAAGAAATGAGGAGAGCACAAGAAGAAATGAGGAACCAAGGCGTCCCAACCTTATCAAGCTTGCTACCTGGGGCTGGCCAGAGCAGCTAAAAGGATCGATTTTGATATCGATATCGATATCTCGACTACATCCCCAGCTCAAACGCGTCTAACTCCTGCAGGAAGGACTCGGGATTTCTAACAGTTGAAGCAAATGAGCGTAATGTTCTAGTTTCTCTGATGTTGCCATTCTGAGAAATCATTTCTATTAGGTATTACTTTGATCTGGATTTCATTATTATTCTTAACGAGTCTCTTATCAGAGTTATGTAAACGACCATCATATTTGTTACCCAATTGGGACTAAACATTATTTTGATAGTTCAGTTGTAATATTTCTTCATATTTCACCTTATCCAA

mRNA sequence

ATGGAGTCCGGCGATGGATACACTATCTATGGTCGGGTGAAAATTTCAAGGAACGCACTTAAAGAATATGGACTTCCTGGAAAAATATCAAACATTAAAGTCATACTTAATGGTGGACAAAGAGTTACCTTCCTGAGGCCCGATGGATACTTTTCATTCTATAATGTGCCAGCAGGAACCCATCTGCTTGAAGTGGCTGCATTGGGCTATTTATTTTCTCCCGTTCGAGTTGATGTGAGTGCCAGAAACCCAGGTAAGGTTCAGGCAGCCCTAACAGAGAACAGGCGGGCATTGAGTGAGCTTGTTTTAGAGCCTTTAAGGGATGAAGAGTATTATGAGATTCGGGAACCGTTCTCCATAATGTCTGTTGTGAAAAGTCCTATGGGTCTGATGGTGGGATTCATGCTAATTGTTGTATTCCTGATGCCCAAGTTAATGGAGAACATAGATCCTGAAGAAATGAGGAGAGCACAAGAAGAAATGAGGAACCAAGGCGTCCCAACCTTATCAAGCTTGCTACCTGGGGCTGGCCAGAGCAGCTAAAAGGATCGATTTTGATATCGATATCGATATCTCGACTACATCCCCAGCTCAAACGCGTCTAACTCCTGCAGGAAGGACTCGGGATTTCTAACAGTTGAAGCAAATGAGCGTAATGTTCTAGTTTCTCTGATGTTGCCATTCTGAGAAATCATTTCTATTAGGTATTACTTTGATCTGGATTTCATTATTATTCTTAACGAGTCTCTTATCAGAGTTATGTAAACGACCATCATATTTGTTACCCAATTGGGACTAAACATTATTTTGATAGTTCAGTTGTAATATTTCTTCATATTTCACCTTATCCAA

Coding sequence (CDS)

ATGGAGTCCGGCGATGGATACACTATCTATGGTCGGGTGAAAATTTCAAGGAACGCACTTAAAGAATATGGACTTCCTGGAAAAATATCAAACATTAAAGTCATACTTAATGGTGGACAAAGAGTTACCTTCCTGAGGCCCGATGGATACTTTTCATTCTATAATGTGCCAGCAGGAACCCATCTGCTTGAAGTGGCTGCATTGGGCTATTTATTTTCTCCCGTTCGAGTTGATGTGAGTGCCAGAAACCCAGGTAAGGTTCAGGCAGCCCTAACAGAGAACAGGCGGGCATTGAGTGAGCTTGTTTTAGAGCCTTTAAGGGATGAAGAGTATTATGAGATTCGGGAACCGTTCTCCATAATGTCTGTTGTGAAAAGTCCTATGGGTCTGATGGTGGGATTCATGCTAATTGTTGTATTCCTGATGCCCAAGTTAATGGAGAACATAGATCCTGAAGAAATGAGGAGAGCACAAGAAGAAATGAGGAACCAAGGCGTCCCAACCTTATCAAGCTTGCTACCTGGGGCTGGCCAGAGCAGCTAA

Protein sequence

MESGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHLLEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS

Homology

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BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot
Match: Q8VY97 (ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g32130 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 7.5e-68
Identity = 129/174 (74.14%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           S D YTI GRV++  + +   G   K SNIKVILNGGQ VTFLRPDGYF+F+ VPAGTHL
Sbjct: 30  SEDSYTITGRVRVPASTV--IGHAAKFSNIKVILNGGQHVTFLRPDGYFTFHKVPAGTHL 89

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EV ALGY FSPVRVDVSAR+ GKVQA LTE RR+L+ELVLEPLR E+YYE+REPFS+MS
Sbjct: 90  IEVYALGYFFSPVRVDVSARHRGKVQATLTETRRSLTELVLEPLRAEQYYEMREPFSVMS 149

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGA 177
           +VKSPMGLMVGFM++VVFLMPKLMENIDPEEM+ AQE+MR+QGVP+L+SLLP +
Sbjct: 150 IVKSPMGLMVGFMVVVVFLMPKLMENIDPEEMKSAQEQMRSQGVPSLTSLLPAS 201

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BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot
Match: Q5TYV0 (ER membrane protein complex subunit 7 OS=Danio rerio OX=7955 GN=emc7 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 50/168 (29.76%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           +GD + I GR  +     +++     IS  +V++ G + V FL+ DG F+  +VP+G+++
Sbjct: 38  NGDRFKIEGRAIVPGVKTQDW-----ISTARVLVEGEEYVGFLKTDGSFAVNDVPSGSYV 97

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPL-------RDEEYYEIR 122
           +E+ +  + F PVRVD++++  GK++A L  N    SE++ +P            Y+  R
Sbjct: 98  VEIVSPSFRFEPVRVDITSK--GKMRARLV-NYIKTSEVIRQPYPLQIRAGGPHTYFMKR 157

Query: 123 EPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRN 164
           E +     + +PM +M+   L+++ L+PK++   DP EMR+  E+  N
Sbjct: 158 ETWGWTDFLMNPMVMMMVLPLLIIVLLPKVVNTNDP-EMRKEMEQSMN 196

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BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot
Match: Q4R5V2 (ER membrane protein complex subunit 7 OS=Macaca fascicularis OX=9541 GN=EMC7 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-13
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 4   GDGYTIYGRVKISRNALKEYGLPGK-ISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 63
           G G  I  R KI   A+     P   IS  +V+++G + V FL+ DG F  +++P+G+++
Sbjct: 36  GSGVGIGDRFKIEGRAVVPGVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYV 95

Query: 64  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPL-------RDEEYYEIR 123
           +EV +  Y F PVRVD++++  GK++A    N    SE+V  P            Y+  R
Sbjct: 96  VEVVSPAYRFDPVRVDITSK--GKMRARYV-NHIKTSEVVRLPYPLQMKSSGPPSYFIKR 155

Query: 124 EPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRN 164
           E +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct: 156 ESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 199

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BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot
Match: Q9NPA0 (ER membrane protein complex subunit 7 OS=Homo sapiens OX=9606 GN=EMC7 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 4   GDGYTIYGRVKISRNALKEYGLPGK-ISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 63
           G G  I  R KI   A+     P   IS  +V+++G + V FL+ DG F  +++P+G+++
Sbjct: 36  GSGVGIGDRFKIEGRAVVPGVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYV 95

Query: 64  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPL-------RDEEYYEIR 123
           +EV +  Y F PVRVD++++  GK++A    N    SE+V  P            Y+  R
Sbjct: 96  VEVVSPAYRFDPVRVDITSK--GKMRARYV-NYIKTSEVVRLPYPLQMKSSGPPSYFIKR 155

Query: 124 EPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRN 164
           E +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct: 156 ESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 199

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot
Match: A5PJA8 (ER membrane protein complex subunit 7 OS=Bos taurus OX=9913 GN=EMC7 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 51/168 (30.36%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           +GD + I GR  +     +++     IS  +V+++G + V FL+ DG F  +++P+G+++
Sbjct: 40  TGDRFKIEGRAVVPGVKPQDW-----ISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYV 99

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPL-------RDEEYYEIR 122
           +EV +  Y F PVRVD++++  GK++A    N    SE+V  P            Y+  R
Sbjct: 100 VEVISPAYRFDPVRVDITSK--GKMRARYV-NYIKTSEVVRLPYPLQMKSSGPPSYFIKR 159

Query: 123 EPFSIMSVVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRN 164
           E +     + +PM +M+   L++  L+PK++   DP +MRR  E+  N
Sbjct: 160 ESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDP-DMRREMEQSMN 198

[Close]

BLAST of Cp4.1LG06g03400 vs. NCBI nr
Match: XP_023535034.1 (ER membrane protein complex subunit 7 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348 bits (894), Expect = 1.91e-120
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. NCBI nr
Match: XP_022935856.1 (ER membrane protein complex subunit 7 homolog [Cucurbita moschata])

HSP 1 Score: 345 bits (885), Expect = 4.49e-119
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFY+VPAGTHL
Sbjct: 29  SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYDVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           LEVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  LEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. NCBI nr
Match: XP_022976199.1 (ER membrane protein complex subunit 7 homolog [Cucurbita maxima])

HSP 1 Score: 345 bits (885), Expect = 4.49e-119
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           LEVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYE REPFSIMS
Sbjct: 89  LEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYETREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. NCBI nr
Match: XP_022941433.1 (ER membrane protein complex subunit 7 homolog [Cucurbita moschata] >KAG6608169.1 ER membrane protein complex subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031809.1 ER membrane protein complex subunit 7-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335 bits (859), Expect = 4.12e-115
Identity = 168/178 (94.38%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKI+ NALK YGLPGKISNIKVILNGGQR+TFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKIAGNALKGYGLPGKISNIKVILNGGQRITFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  IEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLM+GFM++VVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAG+SS
Sbjct: 149 VVKSPMGLMMGFMILVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGRSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. NCBI nr
Match: XP_023524384.1 (ER membrane protein complex subunit 7 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334 bits (856), Expect = 1.18e-114
Identity = 167/178 (93.82%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKI+ N+LK YGLPGKISNIKVILNGGQR+TFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKIAGNSLKGYGLPGKISNIKVILNGGQRITFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  IEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLM+GFM++VVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAG+SS
Sbjct: 149 VVKSPMGLMMGFMILVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGRSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL
Match: A0A6J1IMV4 (ER membrane protein complex subunit 7 homolog OS=Cucurbita maxima OX=3661 GN=LOC111476661 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 2.17e-119
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           LEVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYE REPFSIMS
Sbjct: 89  LEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYETREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL
Match: A0A6J1F5W6 (ER membrane protein complex subunit 7 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442638 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 2.17e-119
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFY+VPAGTHL
Sbjct: 29  SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYDVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           LEVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  LEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL
Match: A0A6J1FS36 (ER membrane protein complex subunit 7 homolog OS=Cucurbita moschata OX=3662 GN=LOC111446728 PE=4 SV=1)

HSP 1 Score: 335 bits (859), Expect = 1.99e-115
Identity = 168/178 (94.38%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKI+ NALK YGLPGKISNIKVILNGGQR+TFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKIAGNALKGYGLPGKISNIKVILNGGQRITFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  IEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLM+GFM++VVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAG+SS
Sbjct: 149 VVKSPMGLMMGFMILVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGRSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL
Match: A0A6J1CCD4 (ER membrane protein complex subunit 7 homolog OS=Momordica charantia OX=3673 GN=LOC111009919 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 3.08e-114
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKI  N +K YGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKIPSNGIKGYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYE+REPFSIMS
Sbjct: 89  IEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEVREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQ 178
           VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAG+
Sbjct: 149 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGR 204

[Close]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL
Match: A0A6J1J2W1 (ER membrane protein complex subunit 7 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480849 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 3.31e-114
Identity = 166/178 (93.26%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           SGDGYTIYGRVKI+ NALK YGLPGKISNIKVIL+GGQR+T+LRPDGYFSFYNVPAGTHL
Sbjct: 29  SGDGYTIYGRVKIAGNALKGYGLPGKISNIKVILDGGQRITYLRPDGYFSFYNVPAGTHL 88

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EVAALGY FSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS
Sbjct: 89  IEVAALGYFFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 148

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQSS 180
           VVKSPMGLM+GFM++VVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAG+SS
Sbjct: 149 VVKSPMGLMMGFMILVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGRSS 206

[Close]

BLAST of Cp4.1LG06g03400 vs. TAIR 10
Match: AT2G25310.1 (Protein of unknown function (DUF2012) )

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-71
Identity = 133/177 (75.14%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           S D YTI GRVKI  + +   G   K SN+KVILNGGQ++TFLRPDGYF+F+ VPAGTHL
Sbjct: 35  SEDSYTITGRVKIPPSNV--IGHIAKFSNVKVILNGGQKITFLRPDGYFTFHEVPAGTHL 94

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EV+A+GY FSPVRVDVSAR+ GKVQA LTE RR+L+ELVLEPL++E+YYEIREPF+IMS
Sbjct: 95  IEVSAMGYFFSPVRVDVSARHRGKVQATLTETRRSLTELVLEPLKEEQYYEIREPFNIMS 154

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGAGQS 180
           +VKSPMGLMVGFM++VVFLMPKLMENIDPEEM++AQEEMR QGVP+L+SLLPGAG S
Sbjct: 155 IVKSPMGLMVGFMVVVVFLMPKLMENIDPEEMKQAQEEMRRQGVPSLTSLLPGAGAS 209

[Close]

BLAST of Cp4.1LG06g03400 vs. TAIR 10
Match: AT4G32130.1 (Protein of unknown function (DUF2012) )

HSP 1 Score: 258.1 bits (658), Expect = 5.4e-69
Identity = 129/174 (74.14%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 3   SGDGYTIYGRVKISRNALKEYGLPGKISNIKVILNGGQRVTFLRPDGYFSFYNVPAGTHL 62
           S D YTI GRV++  + +   G   K SNIKVILNGGQ VTFLRPDGYF+F+ VPAGTHL
Sbjct: 30  SEDSYTITGRVRVPASTV--IGHAAKFSNIKVILNGGQHVTFLRPDGYFTFHKVPAGTHL 89

Query: 63  LEVAALGYLFSPVRVDVSARNPGKVQAALTENRRALSELVLEPLRDEEYYEIREPFSIMS 122
           +EV ALGY FSPVRVDVSAR+ GKVQA LTE RR+L+ELVLEPLR E+YYE+REPFS+MS
Sbjct: 90  IEVYALGYFFSPVRVDVSARHRGKVQATLTETRRSLTELVLEPLRAEQYYEMREPFSVMS 149

Query: 123 VVKSPMGLMVGFMLIVVFLMPKLMENIDPEEMRRAQEEMRNQGVPTLSSLLPGA 177
           +VKSPMGLMVGFM++VVFLMPKLMENIDPEEM+ AQE+MR+QGVP+L+SLLP +
Sbjct: 150 IVKSPMGLMVGFMVVVVFLMPKLMENIDPEEMKSAQEQMRSQGVPSLTSLLPAS 201

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g03400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY97	7.5e-68	74.14	ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5TYV0	1.1e-13	29.76	ER membrane protein complex subunit 7 OS=Danio rerio OX=7955 GN=emc7 PE=2 SV=1	[more]
Q4R5V2	5.3e-13	32.14	ER membrane protein complex subunit 7 OS=Macaca fascicularis OX=9541 GN=EMC7 PE=...	[more]
Q9NPA0	9.1e-13	32.14	ER membrane protein complex subunit 7 OS=Homo sapiens OX=9606 GN=EMC7 PE=1 SV=1	[more]
A5PJA8	1.2e-12	30.36	ER membrane protein complex subunit 7 OS=Bos taurus OX=9913 GN=EMC7 PE=2 SV=1	[more]

BLAST of Cp4.1LG06g03400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535034.1	1.91e-120	100.00	ER membrane protein complex subunit 7 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022935856.1	4.49e-119	98.88	ER membrane protein complex subunit 7 homolog [Cucurbita moschata]	[more]
XP_022976199.1	4.49e-119	98.88	ER membrane protein complex subunit 7 homolog [Cucurbita maxima]	[more]
XP_022941433.1	4.12e-115	94.38	ER membrane protein complex subunit 7 homolog [Cucurbita moschata] >KAG6608169.1...	[more]
XP_023524384.1	1.18e-114	93.82	ER membrane protein complex subunit 7 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG06g03400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IMV4	2.17e-119	98.88	ER membrane protein complex subunit 7 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1F5W6	2.17e-119	98.88	ER membrane protein complex subunit 7 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FS36	1.99e-115	94.38	ER membrane protein complex subunit 7 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CCD4	3.08e-114	94.89	ER membrane protein complex subunit 7 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1J2W1	3.31e-114	93.26	ER membrane protein complex subunit 7 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Cp4.1LG06g03400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25310.1	1.5e-71	75.14	Protein of unknown function (DUF2012)	[more]
AT4G32130.1	5.4e-69	74.14	Protein of unknown function (DUF2012)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019008	Domain of unknown function DUF2012	PFAM	PF09430	DUF2012	coord: 29..131 e-value: 4.0E-22 score: 78.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..180
None	No IPR available	PANTHER	PTHR13605:SF7	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 7 HOMOLOG	coord: 4..178
IPR039163	ER membrane protein complex subunit 7	PANTHER	PTHR13605	UNCHARACTERIZED	coord: 4..178
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 4..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g03400.1	Cp4.1LG06g03400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0072546	EMC complex
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004180	carboxypeptidase activity