Cp4.1LG06g03210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g03210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Serine-rich protein
Location	Cp4.1LG06: 1769948 .. 1770595 (-)
RNA-Seq Expression	Cp4.1LG06g03210
Synteny	Cp4.1LG06g03210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACTTCTTCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACACTCGCCGGGCGGCCGGTTCTGCAACTCTTCTTCCTTGTCTTCTTCTATGTCCGCGTTTGCTTCATCTACTAGTTCAAACTTTTACTCGTCTACTTCTACTTTTCGTGATGATGACCATCGTGGTTTTCGTAGCCATCATCATCAACCTCGATCCACCTCTCCTAGCCGTGTCAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTCATTGATAACCGTTCGAGTTCACCAAATCGATCGGCTATCGTTTCCAGGAAGAATCGACCGGTGTCTAATGTCAAGAGGACTTGTATGTGCTCTCCGACGACGCATCCAGGCTCGTTCCGGTGCAGTCTTCATAAGAACGTCTCGAGCAGCGGCAGCCATAGCCAGTCGGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCCATGGCGAACTCGATCGTACGAATCGGCGGCGTGGAAGGAGAATTGGTGAAACGAGCATTGACAACTCTGATTCGACCTTCTTCACACCAGCAGAGGAGGAGAGCATCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGTCCAAAGCGGACGATGCTTGA

mRNA sequence

ATGGTGACTTCTTCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACACTCGCCGGGCGGCCGGTTCTGCAACTCTTCTTCCTTGTCTTCTTCTATGTCCGCGTTTGCTTCATCTACTAGTTCAAACTTTTACTCGTCTACTTCTACTTTTCGTGATGATGACCATCGTGGTTTTCGTAGCCATCATCATCAACCTCGATCCACCTCTCCTAGCCGTGTCAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTCATTGATAACCGTTCGAGTTCACCAAATCGATCGGCTATCGTTTCCAGGAAGAATCGACCGGTGTCTAATGTCAAGAGGACTTGTATGTGCTCTCCGACGACGCATCCAGGCTCGTTCCGGTGCAGTCTTCATAAGAACGTCTCGAGCAGCGGCAGCCATAGCCAGTCGGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCCATGGCGAACTCGATCGTACGAATCGGCGGCGTGGAAGGAGAATTGGTGAAACGAGCATTGACAACTCTGATTCGACCTTCTTCACACCAGCAGAGGAGGAGAGCATCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGTCCAAAGCGGACGATGCTTGA

Coding sequence (CDS)

ATGGTGACTTCTTCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTCCGATCACACTCGCCGGGCGGCCGGTTCTGCAACTCTTCTTCCTTGTCTTCTTCTATGTCCGCGTTTGCTTCATCTACTAGTTCAAACTTTTACTCGTCTACTTCTACTTTTCGTGATGATGACCATCGTGGTTTTCGTAGCCATCATCATCAACCTCGATCCACCTCTCCTAGCCGTGTCAATGTTTATTCATCTCCTTCTCTTACTCCTTCTGTCCGTTTCTTCATTGATAACCGTTCGAGTTCACCAAATCGATCGGCTATCGTTTCCAGGAAGAATCGACCGGTGTCTAATGTCAAGAGGACTTGTATGTGCTCTCCGACGACGCATCCAGGCTCGTTCCGGTGCAGTCTTCATAAGAACGTCTCGAGCAGCGGCAGCCATAGCCAGTCGGCGTCGTTTCCTTCAACCAGGTTGAATATGTGGAGATCGGCCATGGCGAACTCGATCGTACGAATCGGCGGCGTGGAAGGAGAATTGGTGAAACGAGCATTGACAACTCTGATTCGACCTTCTTCACACCAGCAGAGGAGGAGAGCATCATTTCAACCTAGATCTAGTCGGCTCTCGGTCATGTCCAAAGCGGACGATGCTTGA

Protein sequence

MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHRGFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA

Homology

[Close]

BLAST of Cp4.1LG06g03210 vs. NCBI nr
Match: XP_023536440.1 (uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1036), Expect = 2.46e-141
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
           GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of Cp4.1LG06g03210 vs. NCBI nr
Match: XP_022937125.1 (uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothetical protein SDJN02_13257, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1029), Expect = 2.87e-140
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
           GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSGSHSQ+ASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of Cp4.1LG06g03210 vs. NCBI nr
Match: XP_022976197.1 (uncharacterized protein LOC111476660 [Cucurbita maxima])

HSP 1 Score: 393 bits (1010), Expect = 2.18e-137
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSS KTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR
Sbjct: 1   MVTSSSS-KTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
           GFRSHHHQPRSTSPSRVNVYSSPSL+PSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLSPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSGSHSQ+ASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 214

[Close]

BLAST of Cp4.1LG06g03210 vs. NCBI nr
Match: XP_038899899.1 (uncharacterized protein LOC120087091 [Benincasa hispida])

HSP 1 Score: 364 bits (934), Expect = 8.05e-126
Identity = 197/215 (91.63%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFASS+S  FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSS--FYSSSSTFRHDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            FRSH+HQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRK+RPVSNVKRTC
Sbjct: 61  DFRSHNHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKSRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNV+SSG HSQ+ SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVTSSGDHSQAVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKAD+A
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADEA 213

[Close]

BLAST of Cp4.1LG06g03210 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo])

HSP 1 Score: 359 bits (921), Expect = 7.70e-124
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFASS+S  FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSS--FYSSSSTFRHDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            F +H+HQ RSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSS G HSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL
Match: A0A6J1FFN3 (uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC111443517 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 1.39e-140
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
           GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSGSHSQ+ASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215

[Close]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL
Match: A0A6J1IF54 (uncharacterized protein LOC111476660 OS=Cucurbita maxima OX=3661 GN=LOC111476660 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 1.05e-137
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSS KTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR
Sbjct: 1   MVTSSSS-KTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
           GFRSHHHQPRSTSPSRVNVYSSPSL+PSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLSPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSGSHSQ+ASFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 214

[Close]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL
Match: E5GCC5 (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 3.73e-124
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFASS+S  FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSS--FYSSSSTFRHDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            F +H+HQ RSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSS G HSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL
Match: A0A1S3BUD9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 3.73e-124
Identity = 196/215 (91.16%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFASS+S  FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSS--FYSSSSTFRHDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            F +H+HQ RSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRS IVSRKNRPVSNVKRTC
Sbjct: 61  DFPTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSS G HSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 213

[Close]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL
Match: A0A6J1CMK2 (uncharacterized protein DDB_G0271670 OS=Momordica charantia OX=3673 GN=LOC111012506 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 5.25e-122
Identity = 193/215 (89.77%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60
           MVTSSSSSKTRSSGPV+RS SPGGRFCNS SLSSS SAFASSTSS+FYSS+S FR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVIRSLSPGGRFCNSPSLSSSTSAFASSTSSSFYSSSSAFRHDDHR 60

Query: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSNVKRTC 120
            FRSHH QPRSTSPSRVNVYSSPSL PSVRFFIDNRS SPNRS IVSRKNRPVSNVK+TC
Sbjct: 61  DFRSHH-QPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQSASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSSSG H QS SFPSTRLNM RSAMANS+VRIGGVEGE +KR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADDA 215
           ALTTLIRPSSHQQRRRA+FQPRSSRLSVMSKADDA
Sbjct: 181 ALTTLIRPSSHQQRRRAAFQPRSSRLSVMSKADDA 214

[Close]

BLAST of Cp4.1LG06g03210 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 208.4 bits (529), Expect = 5.8e-54
Identity = 127/217 (58.53%), Postives = 162/217 (74.65%), Query Frame = 0


Query: 5   SSSSKTRSSGPVLRSHSPGGRFCNSSSL---SSSMSAFASSTSSNFYSSTSTFRDDDHRG 64
           ++SS+T+S+GPVLRS SP GRFC   S    SSS SAFASSTSS+F S +S F   +HR 
Sbjct: 3   TTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAF-FSNHRH 62

Query: 65  FRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRPVSN---VKR 124
             S+H   RS SP+RVN+Y++  ++ S R+ +D+RS SP   +I   KN+P S+   + R
Sbjct: 63  HESNHSHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISR 122

Query: 125 TCMCSPTTHPGSFRCSLHKNVSSSGSHSQ-SASFPSTRLNMWRSAMANSIVRIGGVEGEL 184
            CMCSPTTHPGSFRCSLHKNV++   H Q +AS+ +  LNM RSAM NS+VRIGGVEGE 
Sbjct: 123 RCMCSPTTHPGSFRCSLHKNVAN--PHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182

Query: 185 VKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADD 215
           V+RALTTLIRPSSH  +RRA++QPR SRLS+M+KAD+
Sbjct: 183 VRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Cp4.1LG06g03210 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 126/222 (56.76%), Postives = 159/222 (71.62%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSHSPGGRFC-----NSSSLSSSMSAFASSTSSNFYSSTSTFRDDD 64
           +SS  TRS+G   LRS SP GRFC        S S S S FASSTSS+F S ++ F    
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  HRGFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRP-----V 124
           +   +++HHQ RS SP+RVN+++S  +T S R+ IDNRS SPNRS  VS  N+P     +
Sbjct: 64  N---QNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKI 123

Query: 125 SNVKRTCMCSPTTHPGSFRCSLHKNVSSSGSHSQ-SASFPSTRLNMWRSAMANSIVRIGG 184
            + +R CMCSPTTHPGSFRCSLHKNV++   H Q +AS+ +  LNM RSAM NS+VRIGG
Sbjct: 124 PDSRRRCMCSPTTHPGSFRCSLHKNVAN--PHGQGTASYTTNGLNMRRSAMTNSLVRIGG 183

Query: 185 VEGELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADD 215
           VEGE V+RALTTLIRPSSHQ +RR++++PR SRL+ MSKA+D
Sbjct: 184 VEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Cp4.1LG06g03210 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 126/222 (56.76%), Postives = 159/222 (71.62%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSHSPGGRFC-----NSSSLSSSMSAFASSTSSNFYSSTSTFRDDD 64
           +SS  TRS+G   LRS SP GRFC        S S S S FASSTSS+F S ++ F    
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  HRGFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIVSRKNRP-----V 124
           +   +++HHQ RS SP+RVN+++S  +T S R+ IDNRS SPNRS  VS  N+P     +
Sbjct: 64  N---QNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKI 123

Query: 125 SNVKRTCMCSPTTHPGSFRCSLHKNVSSSGSHSQ-SASFPSTRLNMWRSAMANSIVRIGG 184
            + +R CMCSPTTHPGSFRCSLHKNV++   H Q +AS+ +  LNM RSAM NS+VRIGG
Sbjct: 124 PDSRRRCMCSPTTHPGSFRCSLHKNVAN--PHGQGTASYTTNGLNMRRSAMTNSLVRIGG 183

Query: 185 VEGELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADD 215
           VEGE V+RALTTLIRPSSHQ +RR++++PR SRL+ MSKA+D
Sbjct: 184 VEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Cp4.1LG06g03210 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 75.1 bits (183), Expect = 7.7e-14
Identity = 61/172 (35.47%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 49  SSTSTFR--DDDHRGFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSAIV 108
           SS S  R      R   +HHH  R  SPS  N     +L   ++F+  +  S P  S + 
Sbjct: 7   SSRSVLRPLSSSQRLHNNHHHHHRQRSPSPCN----KNLNLRLKFY--SPGSIPKPSVVT 66

Query: 109 SRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSSSGSHSQSASF------------PST 168
              N      KR C+CSPTTHPGSFRCS H+ +    S + ++S              + 
Sbjct: 67  VSSNH---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNV 126

Query: 169 RLNMWRSAMANSIVRIGGVEGELVKRAL-TTLIRPSSHQQRRRASFQPRSSR 206
            LN+ + A+ NS+ +IG VE E  +R+L   L +PSS    RR  F+PR SR
Sbjct: 127 GLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Cp4.1LG06g03210 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 110 NRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSSSGSHSQSAS 151
           +R  S  K  C+CSPTTHPGSFRC +H+++S   + S  A+
Sbjct: 34  SRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSIEAA 74

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g03210 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG06g03210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536440.1	2.46e-141	100.00	uncharacterized serine-rich protein C215.13 [Cucurbita pepo subsp. pepo]	[more]
XP_022937125.1	2.87e-140	99.07	uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothet...	[more]
XP_022976197.1	2.18e-137	98.14	uncharacterized protein LOC111476660 [Cucurbita maxima]	[more]
XP_038899899.1	8.05e-126	91.63	uncharacterized protein LOC120087091 [Benincasa hispida]	[more]
XP_008452898.1	7.70e-124	91.16	PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein...	[more]

BLAST of Cp4.1LG06g03210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFN3	1.39e-140	99.07	uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]
A0A6J1IF54	1.05e-137	98.14	uncharacterized protein LOC111476660 OS=Cucurbita maxima OX=3661 GN=LOC111476660...	[more]
E5GCC5	3.73e-124	91.16	Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BUD9	3.73e-124	91.16	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1	[more]
A0A6J1CMK2	5.25e-122	89.77	uncharacterized protein DDB_G0271670 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Cp4.1LG06g03210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	5.8e-54	58.53	serine-rich protein-related	[more]
AT5G25280.1	1.5e-49	56.76	serine-rich protein-related	[more]
AT5G25280.2	1.5e-49	56.76	serine-rich protein-related	[more]
AT5G20370.1	7.7e-14	35.47	serine-rich protein-related	[more]
AT1G67910.1	1.1e-04	48.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..207
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 5..213
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 5..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g03210.1	Cp4.1LG06g03210.1	mRNA