Cp4.1LG06g03160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g03160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Beta-1,3-N-Acetylglucosaminyltransferase family protein
Location	Cp4.1LG06: 1776301 .. 1777708 (-)
RNA-Seq Expression	Cp4.1LG06g03160
Synteny	Cp4.1LG06g03160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGATTGGATGTGACATATTCTCTAACTAAACAAGGGGTTAGTTTTCGTTATGGATTTGAACGGTTTCAATCTTTTAACAAGACTCACCTACTTCTTGTAACCATACCCCTCAAAGTTACAAAATTGTAGCAATTAACTCGAACTATTTAGTGAACTATAACTTAAATTTTGATGGCTCGGGGATAATTACGGGAAGTTTACGGATGCAATTACAACAAATTAGAAGATTTTACTAAGAAACTAAATGCCCAAAGAGAACTTAAATGCAGAATCAATTAGATGCAAAAAAAAGAAAAGAATAAGTAACAAAAAAATCCCATCACGATTTGCATCTTCCTATTTTTGTTCTCAACTACATAGTGTTCAAAAACAGTCAACCCAAATGAAACATTATGTTGACAGCACATCACACTTAAGACTTGCGTGAGAGTCTTGAATTAATTTTCTTTTTCTTCTAGACCATTATTAATTTAATAATTATTGCCATAATAAACCAATGAGCAAAGCCGTTCAAAATACAGATATGAAGACAGACACTAGCAAACCATAATTTCCAAGAACAAGAAATCATAAAAACAGAGAATTTGGTTTCTAAACTCACTTACCTCAAAAGCACTCCCTTCTGCTATGATCAACCTCTCCGCCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGTAACAGTATTTGATTAAAAAACGAAGTCAAAATCAAGAGATCTCTACCTTTAGAGCTTTCTTTCTCTCCCCTTTCTGGGTTTGAGTTGGTGGATTTTGTTGCAGGGTTTGGTGCTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAGAGAAGTGGAAGGGTGATTGGGGGCCAACCTGAATGGAACGTGCAAGTGATTAACAACTGCGATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGACTGTTGAACCTGTTGATCCATCGATTGTGTCAAAGCAAGGGGACGCTTGCCTGCTCATAAATGGAGGAATTGTTCAGCCTGGTTCTTCAGTTCAATTTTCCTATGCTTGGGATCCCCCTTTCATCTTGTTCCCTCGTTTCTCTGTTTCTCAGTGTCATACCTGAAGCAACAACAAACAATATTACAAAGTTGTCAATTTAGTCTGAGTTAATCGTAAAGTTGAGGAAAAATTTGAAGATAATCGTTCTTTTTTGAGTTTGTTTGCTTCGCCTGATTGATATGTTAAAGATGGGATGAAACAGCTTCTAATTATTTGGTCCAAGGCAGAAATTTTGCATATATTGCTAACCCTGCTTGAATTTGACAATAGAATCTTCCTTTTGAAAGATTGATAGATATGAGCAGCTTGTATAGCTTGCACAGTTTGATTTCCCATTCAGGGTCTGTGCCTG

mRNA sequence

AGAGAGATTGGATGTGACATATTCTCTAACTAAACAAGGGGTTAGTTTTCGTTATGGATTTGAACGGTTTCAATCTTTTAACAAGACTCACCTACTTCTTGTAACCATACCCCTCAAAGTTACAAAATTGTAGCAATTAACTCGAACTATTTAGTGAACTATAACTTAAATTTTGATGGCTCGGGGATAATTACGGGAAGTTTACGGATGCAATTACAACAAATTAGAAGATTTTACTAAGAAACTAAATGCCCAAAGAGAACTTAAATGCAGAATCAATTAGATGCAAAAAAAAGAAAAGAATAAGTAACAAAAAAATCCCATCACGATTTGCATCTTCCTATTTTTGTTCTCAACTACATAGTGTTCAAAAACAGTCAACCCAAATGAAACATTATGTTGACAGCACATCACACTTAAGACTTGCGTGAGAGTCTTGAATTAATTTTCTTTTTCTTCTAGACCATTATTAATTTAATAATTATTGCCATAATAAACCAATGAGCAAAGCCGTTCAAAATACAGATATGAAGACAGACACTAGCAAACCATAATTTCCAAGAACAAGAAATCATAAAAACAGAGAATTTGGTTTCTAAACTCACTTACCTCAAAAGCACTCCCTTCTGCTATGATCAACCTCTCCGCCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTTTGGTGCTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAGAGAAGTGGAAGGGTGATTGGGGGCCAACCTGAATGGAACGTGCAAGTGATTAACAACTGCGATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGACTGTTGAACCTGTTGATCCATCGATTGTGTCAAAGCAAGGGGACGCTTGCCTGCTCATAAATGGAGGAATTGTTCAGCCTGGTTCTTCAGTTCAATTTTCCTATGCTTGGGATCCCCCTTTCATCTTGTTCCCTCGTTTCTCTGTTTCTCAGTGTCATACCTGAAGCAACAACAAACAATATTACAAAGTTGTCAATTTAGTCTGAGTTAATCGTAAAGTTGAGGAAAAATTTGAAGATAATCGTTCTTTTTTGAGTTTGTTTGCTTCGCCTGATTGATATGTTAAAGATGGGATGAAACAGCTTCTAATTATTTGGTCCAAGGCAGAAATTTTGCATATATTGCTAACCCTGCTTGAATTTGACAATAGAATCTTCCTTTTGAAAGATTGATAGATATGAGCAGCTTGTATAGCTTGCACAGTTTGATTTCCCATTCAGGGTCTGTGCCTG

Coding sequence (CDS)

ATGATCAACCTCTCCGCCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTTTGGTGCTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAGAGAAGTGGAAGGGTGATTGGGGGCCAACCTGAATGGAACGTGCAAGTGATTAACAACTGCGATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGACTGTTGAACCTGTTGATCCATCGATTGTGTCAAAGCAAGGGGACGCTTGCCTGCTCATAAATGGAGGAATTGTTCAGCCTGGTTCTTCAGTTCAATTTTCCTATGCTTGGGATCCCCCTTTCATCTTGTTCCCTCGTTTCTCTGTTTCTCAGTGTCATACCTGA

Protein sequence

MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRFSVSQCHT

Homology

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.6e-06
Identity = 28/85 (32.94%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 28  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK 87
           CS D I +    +  +  G P + V++ N+C  DC   +I +SC  F +V  V+P +  +
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 88  -QGDACLLINGGIVQPGSSVQFSYA 110
              D CL+ +G  + PG S+ F YA
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYA 164

[Close]

BLAST of Cp4.1LG06g03160 vs. NCBI nr
Match: XP_022976215.1 (uncharacterized protein LOC111476671 [Cucurbita maxima] >XP_023534933.1 uncharacterized protein LOC111796512 [Cucurbita pepo subsp. pepo] >KAG6591555.1 hypothetical protein SDJN03_13901, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024443.1 hypothetical protein SDJN02_13258 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261 bits (668), Expect = 4.11e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC
Sbjct: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF
Sbjct: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120

Query: 121 SVSQCHT 127
           SVSQCHT
Sbjct: 121 SVSQCHT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. NCBI nr
Match: XP_022937408.1 (uncharacterized protein LOC111443708 [Cucurbita moschata])

HSP 1 Score: 257 bits (656), Expect = 2.79e-86
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLSAMIAAILILFLSFINEGFGA SCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC
Sbjct: 1   MINLSAMIAAILILFLSFINEGFGAASCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQTVEPVDPSIVSKQGDAC LINGGIVQPGSSVQFSYAWDPPFILFPRF
Sbjct: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACRLINGGIVQPGSSVQFSYAWDPPFILFPRF 120

Query: 121 SVSQCHT 127
           SVSQCHT
Sbjct: 121 SVSQCHT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. NCBI nr
Match: XP_038899927.1 (uncharacterized protein LOC120087115 [Benincasa hispida])

HSP 1 Score: 226 bits (577), Expect = 3.12e-74
Identity = 110/127 (86.61%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINL  MIAAI ILFLSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQVINNC+C
Sbjct: 1   MINLYTMIAAIFILFLSFINEGSAAGSCSLDTINIGTQRSGREIGGQPEWNVQVINNCNC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQT+EPVDPSI+SKQ D CLLINGG VQPGSSV FSYAWDPP I+FPR 
Sbjct: 61  PQKQIVLSCPGFQTIEPVDPSILSKQRDTCLLINGGTVQPGSSVSFSYAWDPPIIMFPRS 120

Query: 121 SVSQCHT 127
           SVSQC T
Sbjct: 121 SVSQCPT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. NCBI nr
Match: KAA0063321.1 (TPD1 protein-like protein 1A-like [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 5.18e-73
Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLS MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQ+INNCDC
Sbjct: 1   MINLSTMIAAIIILLLSFINEGCAAGSCSLDTINIGTQRSGREIGGQPEWNVQMINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQI+LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQPGSSV FSYAWDPP I+ PRF
Sbjct: 61  PQKQIILSCQGFQTIEPVDPSILSKQRDNCLLINGGIVQPGSSVSFSYAWDPPVIMLPRF 120

Query: 121 SVSQCHT 127
           SVS C T
Sbjct: 121 SVSLCPT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. NCBI nr
Match: XP_022141679.1 (uncharacterized protein LOC111011980 [Momordica charantia])

HSP 1 Score: 219 bits (559), Expect = 1.74e-71
Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLS MIAAILIL LSFIN+G   G+CSLDTINIGT+RSGR IGGQPEWNVQVINNCDC
Sbjct: 1   MINLSTMIAAILILILSFINKGSAGGNCSLDTINIGTERSGREIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQT EPV PSI+SKQGD CLLING  VQP +SV FSYAWDPPFI+FPRF
Sbjct: 61  PQKQIVLSCPGFQTTEPVVPSILSKQGDTCLLINGSTVQPRASVSFSYAWDPPFIMFPRF 120

Query: 121 SVSQC 125
           SV+QC
Sbjct: 121 SVAQC 125

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL
Match: A0A6J1IIV5 (uncharacterized protein LOC111476671 OS=Cucurbita maxima OX=3661 GN=LOC111476671 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 1.99e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC
Sbjct: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF
Sbjct: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120

Query: 121 SVSQCHT 127
           SVSQCHT
Sbjct: 121 SVSQCHT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL
Match: A0A6J1FFZ8 (uncharacterized protein LOC111443708 OS=Cucurbita moschata OX=3662 GN=LOC111443708 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 1.35e-86
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLSAMIAAILILFLSFINEGFGA SCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC
Sbjct: 1   MINLSAMIAAILILFLSFINEGFGAASCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQTVEPVDPSIVSKQGDAC LINGGIVQPGSSVQFSYAWDPPFILFPRF
Sbjct: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACRLINGGIVQPGSSVQFSYAWDPPFILFPRF 120

Query: 121 SVSQCHT 127
           SVSQCHT
Sbjct: 121 SVSQCHT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL
Match: A0A5A7VC88 (TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001470 PE=4 SV=1)

HSP 1 Score: 223 bits (569), Expect = 2.51e-73
Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLS MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQ+INNCDC
Sbjct: 1   MINLSTMIAAIIILLLSFINEGCAAGSCSLDTINIGTQRSGREIGGQPEWNVQMINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQI+LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQPGSSV FSYAWDPP I+ PRF
Sbjct: 61  PQKQIILSCQGFQTIEPVDPSILSKQRDNCLLINGGIVQPGSSVSFSYAWDPPVIMLPRF 120

Query: 121 SVSQCHT 127
           SVS C T
Sbjct: 121 SVSLCPT 127

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL
Match: A0A6J1CJF7 (uncharacterized protein LOC111011980 OS=Momordica charantia OX=3673 GN=LOC111011980 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 8.40e-72
Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDC 60
           MINLS MIAAILIL LSFIN+G   G+CSLDTINIGT+RSGR IGGQPEWNVQVINNCDC
Sbjct: 1   MINLSTMIAAILILILSFINKGSAGGNCSLDTINIGTERSGREIGGQPEWNVQVINNCDC 60

Query: 61  PQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRF 120
           PQKQIVLSCPGFQT EPV PSI+SKQGD CLLING  VQP +SV FSYAWDPPFI+FPRF
Sbjct: 61  PQKQIVLSCPGFQTTEPVVPSILSKQGDTCLLINGSTVQPRASVSFSYAWDPPFIMFPRF 120

Query: 121 SVSQC 125
           SV+QC
Sbjct: 121 SVAQC 125

[Close]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL
Match: A0A5D3E811 (TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007690 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 1.15e-70
Identity = 104/121 (85.95%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 7   MIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIV 66
           MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQVINNCDCPQKQI+
Sbjct: 1   MIAAIIILLLSFINEGCAAGSCSLDTINIGTQRSGREIGGQPEWNVQVINNCDCPQKQII 60

Query: 67  LSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRFSVSQCH 126
           LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQPGSSV FSYAWDPP I+ PRFSVS C 
Sbjct: 61  LSCQGFQTIEPVDPSILSKQRDNCLLINGGIVQPGSSVSFSYAWDPPVIMLPRFSVSLCP 120

[Close]

BLAST of Cp4.1LG06g03160 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 101.7 bits (252), Expect = 4.5e-22
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 6   AMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQI 65
           A+   +++L LS ++ G     C+   I IG  R+GR IGGQPEW V VIN C+C QK +
Sbjct: 4   ALKCFVVVLLLSMVSHGLCL--CTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKHV 63

Query: 66  VLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDP 113
            LSC GF   +PV P ++  QG+ CL+I G  +  G++ QF+YA  P
Sbjct: 64  TLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYAGQP 108

[Close]

BLAST of Cp4.1LG06g03160 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 44/116 (37.93%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 12  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCP 71
           L+LFL+F+N+G+  G CSL+++++   ++G+++  +PEW V+V N C +C  +   L C 
Sbjct: 11  LVLFLAFVNQGY--GDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELLCV 70

Query: 72  GFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFILFPRFSVSQCH 127
           GF +V P+D S++ K GDACL+  G  + P   + F Y WD  F L     V  C+
Sbjct: 71  GFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVCY 124

[Close]

BLAST of Cp4.1LG06g03160 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 12  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCP 71
           L+LFL+F+N+G+  G C L+ +++   ++G+++  +PEW V+V N C +C  +   LSC 
Sbjct: 11  LVLFLAFVNQGY--GDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLSCV 70

Query: 72  GFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFIL 117
           GFQ+V PV  S++SK GD CLL  G  + P     F+Y WD  F L
Sbjct: 71  GFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDL 114

[Close]

BLAST of Cp4.1LG06g03160 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 12  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPG 71
           L+L  +F+ +G+G  S SL+++++   ++G ++  +PEW V+V+N+  C      LSC  
Sbjct: 11  LVLLFAFVTQGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHTTLSCVR 70

Query: 72  FQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWDPPFIL 117
           F++V P+D  ++SK GD CLL NG  +     + F Y WD  F L
Sbjct: 71  FKSVTPIDSKVLSKSGDTCLLGNGDSIH---DISFKYVWDTSFDL 112

[Close]

BLAST of Cp4.1LG06g03160 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-07
Identity = 28/85 (32.94%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 28  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK 87
           CS D I +    +  +  G P + V++ N+C  DC   +I +SC  F +V  V+P +  +
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 88  -QGDACLLINGGIVQPGSSVQFSYA 110
              D CL+ +G  + PG S+ F YA
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYA 164

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g03160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3T1	7.6e-06	32.94	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]

BLAST of Cp4.1LG06g03160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976215.1	4.11e-88	100.00	uncharacterized protein LOC111476671 [Cucurbita maxima] >XP_023534933.1 uncharac...	[more]
XP_022937408.1	2.79e-86	98.43	uncharacterized protein LOC111443708 [Cucurbita moschata]	[more]
XP_038899927.1	3.12e-74	86.61	uncharacterized protein LOC120087115 [Benincasa hispida]	[more]
KAA0063321.1	5.18e-73	85.04	TPD1 protein-like protein 1A-like [Cucumis melo var. makuwa]	[more]
XP_022141679.1	1.74e-71	84.00	uncharacterized protein LOC111011980 [Momordica charantia]	[more]

BLAST of Cp4.1LG06g03160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIV5	1.99e-88	100.00	uncharacterized protein LOC111476671 OS=Cucurbita maxima OX=3661 GN=LOC111476671...	[more]
A0A6J1FFZ8	1.35e-86	98.43	uncharacterized protein LOC111443708 OS=Cucurbita moschata OX=3662 GN=LOC1114437...	[more]
A0A5A7VC88	2.51e-73	85.04	TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1CJF7	8.40e-72	84.00	uncharacterized protein LOC111011980 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5D3E811	1.15e-70	85.95	TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cp4.1LG06g03160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32090.1	4.5e-22	43.93	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32110.1	1.9e-20	37.93	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	7.2e-20	41.51	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32100.1	4.0e-18	36.19	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G32583.1	5.4e-07	32.94	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF48	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 9..125
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 9..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g03160.1	Cp4.1LG06g03160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination