Cp4.1LG06g03140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTACACGGGAGCTGAGAGACTAAACCCTGTTCCGTCGATTGGTTCCAACTCTGACCGAAGCTCAGAAACTGAATATTTTTACCGCCAGAATCTCTATTCATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCATCAGGTCAGTTGTTTCCGCTGCCAATCCCAAATCTCCCTTCGATGCCATCACTCTCAGAATACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGGTTCGCCGACTCGTTTTCTTCTTTATTTTGATCCATTTCCTCGTACTACTTTTTGCAATTTGTTTCACCTAATTTGAGATTTGGATTATCGTTTAGAATGTTTGCTTTAATTTTTCTGCTGCGGAATTTTACAGCCTGCAATGAGGTTCAATTCATTTTCTGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGGCACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGTGACGATAGCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATCTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATACGTTCTTAAACGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGTATCGCTCATCTCAAATTCAAAGTTACTTGTCATTTTGGTCTGGATTTGGATGGTTAATTACAGATTACTGCCCATTTTGGTCTGGATTTGGATGCCATAATATGTTGCCTTTAATAAGTGATCCATGCTAAGTGCAAGTTCAAAATCTATCTGCTCTTTTCATCTACTCCATATAGGCTTCAAATATAGTTTTAAAAGTTTTCTAACTTACATTCACCGGTATTGAATTGTCAGACACATTGTTGTAATCCCTCAAATGATTTATCCAATATCGGTAAGTGCTTCAAAACACTTTTTCTTACAGTTATAAACACTTTTCAGGACTTAGAAAGTCATTCCAAACCAATAATTTGAGGTGACCAAGGTGCGCGCCTCCTGCAAGGCGATGCTGCCTAGGGTCACCTCGCCTCTGTCTAAGTCAGGGCAAGCGTCTTCAAGAAGGCACTCGCCCTACTGTGCCTTCACGTGCCTGTTGGCGCCTTTGTCACACACCGGATTACATTGAATGTTTCTGATATTTTAATGTTTTTCTATTTAGTATCAATCTTCAAAGCTTTGAAATTTGGATGTTTTTACAATGTATGGTCTCAATATATAATTTTACGCCTCGCCGTTTTGTCACCTCTCCCCTTGAGGCGATCGAGGGGTTTGTTGCCTTGAGGTTCACCTTGCACTTTGAAAACAGTTCCAAACAGGCCATAAGTTAACTAAAGTTAAGGATTAAGCTTGTTGTGCTTTAACTCCTGTTGTCTACAAATGGTCTTTTTGGGTTTTTGTTGATTTCAGGAAATTGAGTGGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAAATCATACGCTTCTTTGGCACCATCAAACATGGTTGTTACCATTTTAAGGTATTCAAGGATTATGTTTTTCTTCCTTTTTATAATCAATTGCTATCCATAGTTCATCAATCATGATTAGTTTTAACATATGTACAGTTGTTTTCTCTTTATGGGGTCATCAGTGAGATTGTGTTAATGGAAAAAAGAGGTGACAAAAAGGTAAAAGGAAAATTAGACAGTCGAGTGATTACAAACAGGTAGAACTTAGTGTCTATGGTAAATTTCAAATGCTTTCTACCAGTTGGCCAAGAACACCCCGAAAAGGGAAAAGCATGGTTACAACTTAAAAAAAAAAGTCTTGAAAATTGGTCCTAGTATAATCATTGCAAGAAATTACTACACTATTGTTTGTTTCCTCAGATTACTACTGATTATATGGTGCAAACTATGTGGTTTTCTGCCTGTGATGTTTGTTATCAATGTTGTTTGACTACTATTGCTTTGCTGCAATTATTATATGTTTGAAACAAAAATCATATTAAGGATTTAGGGTCAAGATTTTTTAGGCTCATCTGAAAACCTGTAACGTTTATGGTTTTTGAAAATTAAGCTGTTGAACACTACTGTCATTCATGAGCTTTGTTGATTTGTTATCCACTTTTGACAAATGATTTCAAAGTTCGAACTAAAAAATAGTTTTTTACGAACTTGTTCCTGTTTTTTCAGAATTTGACTAAGAATTCAAATGTTTCTTTTAGAGACGTTTAGAATTTTCAGAATGTCAGTCACTTTGAAAACGAAAACTAAAACAGTTCACATTTTGGGAATGGCAACCGTTAAAGGGTGTGGCCAAGTTTCTCTAGCTAGTGCTACTCATAATAATGTCGAGTTAGAAAGAAAACCCTTTTTGAAAAAAGGTGAGACTTGTAGAAATCAGTTCTCAAATAACAATTAGAGACAAAAACTGATGTCCTGTTTCCTTTTCTTTTGATTCACACGGCTTTCCTCATCCCATGTCCTTCTATGTATGCGAAGGGGTGTTATTTTCACTGCTTCAGCATGCTTTTCAAAAGCTAAATGTCTATAATAATTATGTGAAACTAAGTAATATCATGATTTTGATTTTGATTTTGATCCTGTTCACATCTGTAGCTTTTGGCTTCTGTTCTTCCTCGCATGTGGCATCATAATTGAATAACCATCCCAATGTTTATTTTCTTGCTTTTATGATTTCTCCCTCATCTTCAACATCAGTTCTCAAACTTGAATGTAAAATGCGCTTTATTGTTCTTTCTTTCTTACATTTAAAGCCTGAGTTTCTTCCTGCTTTCAAATTGGCAGAGATTTGAAAGGTGGCTTTGTTAGTTCTGTTGCTTTCACATCTGGGCTTATGATTTAGGATTGTCTAGTGCTGACTTTGATGTCTGCATGAATGTTAACGTGTTTTTGAAGTCATGACATGGTCTGGATCTGACTGTTCTTCCAAGATTTACCGCCCATATGCTAGTGTTTCTGCTATGGAATTATGCTCATAATCAAACCCTTTTCTTTCTTTTTTTTTATTGAAAGTAACTTGCATTGTTAATTATGCAGGAGGCAGCAACAGCATAATGAATTTCAATATATTTTAAACTAATTCTAATTTATACGTATTTGTAAATCATTACGTGTGAAACTTGTGCTCTTCGGTAAGGTATCTTTTTCGGGAGTATTTAACTTCATTGTTAATTTATAGGATATGGGGCATAAAGTTGAGTGAAGTTGTGCAACGAGGTATTTTTATATCCTCTTTGTCAACTAGACATGTTCGTATTGATGTCAATAGAGAGTTTATGAGATTGTTGAAATTGAGATGAATGCATGGTAGAATGCACAAACCATTTATGAATTACGTGTAAATTCTCGAGCCTTATGATAGATACGAAGGTGGACTATAAGTATGCATGAACTCAATTTTACATATTT CGTACACGGGAGCTGAGAGACTAAACCCTGTTCCGTCGATTGGTTCCAACTCTGACCGAAGCTCAGAAACTGAATATTTTTACCGCCAGAATCTCTATTCATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCATCAGGTCAGTTGTTTCCGCTGCCAATCCCAAATCTCCCTTCGATGCCATCACTCTCAGAATACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGCCTGCAATGAGGTTCAATTCATTTTCTGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGGCACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGTGACGATAGCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATCTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATACGTTCTTAAACGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGAAATTGAGTGGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAAATCATACGCTTCTTTGGCACCATCAAACATGGTTGTTACCATTTTAAGAGATTTGAAAGGTGGCTTTGTTAGTTCTGTTGCTTTCACATCTGGGCTTATGATTTAGGATTGTCTAGTGCTGACTTTGATGTCTGCATGAATGTTAACGTGTTTTTGAAGTCATGACATGGTCTGGATCTGACTGTTCTTCCAAGATTTACCGCCCATATGCTAGTGTTTCTGCTATGGAATTATGCTCATAATCAAACCCTTTTCTTTCTTTTTTTTTATTGAAAGTAACTTGCATTGTTAATTATGCAGGAGGCAGCAACAGCATAATGAATTTCAATATATTTTAAACTAATTCTAATTTATACGTATTTGTAAATCATTACGTGTGAAACTTGTGCTCTTCGGTAAGGTATCTTTTTCGGGAGTATTTAACTTCATTGTTAATTTATAGGATATGGGGCATAAAGTTGAGTGAAGTTGTGCAACGAGGTATTTTTATATCCTCTTTGTCAACTAGACATGTTCGTATTGATGTCAATAGAGAGTTTATGAGATTGTTGAAATTGAGATGAATGCATGGTAGAATGCACAAACCATTTATGAATTACGTGTAAATTCTCGAGCCTTATGATAGATACGAAGGTGGACTATAAGTATGCATGAACTCAATTTTACATATTT ATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCATCAGGTCAGTTGTTTCCGCTGCCAATCCCAAATCTCCCTTCGATGCCATCACTCTCAGAATACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGCCTGCAATGAGGTTCAATTCATTTTCTGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGGCACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGTGACGATAGCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATCTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATACGTTCTTAAACGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGAAATTGAGTGGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAA MAGVFRSAHRRIRSSYSKILTRRLWRRHCSPSQSTIISTSLFIRSVVSAANPKSPFDAITLRILRNEIEYQSDYAPPHLPAMRFNSFSVEDRPGMQWITLKGKFGGTEDIKIEATMFDGCKSVPKLGDDSDGEEDLRLHSSVLVDISKRDGSDYLEFVCSAWPDSLEIQKLYVLKRDRMLSRPYMGPDFRKLSGEIQTEFREFLAERRIDKELAVFLHEYMMNKDRCELIRWLATVKTFVER Homology
BLAST of Cp4.1LG06g03140 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.8e-15 Identity = 75/271 (27.68%), Postives = 124/271 (45.76%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy Swiss-Prot
Match: Q8W487 (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39795 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.5e-14 Identity = 78/257 (30.35%), Postives = 113/257 (43.97%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy Swiss-Prot
Match: O22288 (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39790 PE=3 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09 Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. NCBI nr
Match: XP_023534978.1 (mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534979.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534980.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534981.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534982.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488 bits (1255), Expect = 7.98e-174 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. NCBI nr
Match: KAG7024431.1 (hypothetical protein SDJN02_13246 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 471 bits (1213), Expect = 2.02e-167 Identity = 233/242 (96.28%), Postives = 237/242 (97.93%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. NCBI nr
Match: XP_022936658.1 (mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936659.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936660.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936661.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 470 bits (1210), Expect = 5.79e-167 Identity = 233/242 (96.28%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. NCBI nr
Match: KAG6591546.1 (hypothetical protein SDJN03_13892, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 465 bits (1196), Expect = 7.89e-165 Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. NCBI nr
Match: XP_038896995.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida] >XP_038896996.1 uncharacterized protein At2g39795, mitochondrial [Benincasa hispida]) HSP 1 Score: 439 bits (1130), Expect = 9.07e-155 Identity = 213/242 (88.02%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy TrEMBL
Match: A0A6J1FEC0 (mitochondrial acidic protein mam33-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443189 PE=4 SV=1) HSP 1 Score: 470 bits (1210), Expect = 2.80e-167 Identity = 233/242 (96.28%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy TrEMBL
Match: A0A6J1D8I6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018319 PE=4 SV=1) HSP 1 Score: 409 bits (1051), Expect = 4.80e-143 Identity = 198/242 (81.82%), Postives = 219/242 (90.50%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy TrEMBL
Match: A0A1S3BUU9 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493767 PE=4 SV=1) HSP 1 Score: 402 bits (1033), Expect = 2.65e-140 Identity = 198/242 (81.82%), Postives = 216/242 (89.26%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy TrEMBL
Match: A0A6J1IUX2 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111480818 PE=4 SV=1) HSP 1 Score: 400 bits (1028), Expect = 1.48e-139 Identity = 199/242 (82.23%), Postives = 217/242 (89.67%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. ExPASy TrEMBL
Match: A0A0A0L152 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652120 PE=4 SV=1) HSP 1 Score: 400 bits (1027), Expect = 2.18e-139 Identity = 196/242 (80.99%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. TAIR 10
Match: AT4G31930.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 242.7 bits (618), Expect = 3.1e-64 Identity = 130/233 (55.79%), Postives = 162/233 (69.53%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45 Identity = 105/245 (42.86%), Postives = 149/245 (60.82%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 180.3 bits (456), Expect = 1.9e-45 Identity = 90/190 (47.37%), Postives = 124/190 (65.26%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 92.4 bits (228), Expect = 5.2e-19 Identity = 75/236 (31.78%), Postives = 112/236 (47.46%), Query Frame = 0
BLAST of Cp4.1LG06g03140 vs. TAIR 10
Match: AT5G02050.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 72.0 bits (175), Expect = 7.3e-13 Identity = 70/254 (27.56%), Postives = 110/254 (43.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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