Cp4.1LG06g03040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g03040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein 1-like
Location	Cp4.1LG06: 1696593 .. 1697201 (+)
RNA-Seq Expression	Cp4.1LG06g03040
Synteny	Cp4.1LG06g03040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCCTTACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCACCCTTCTGGATCTTCAACTCTCATCCAACTCCTCTGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGAGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTTCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCGTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTTGGCGGCCGGAATTTTGGAAGATTTGATGATGTGACTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGTAGTAATAATGTTAGTATTGTTCATTCTCAGACCAAACCGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

mRNA sequence

ATGGAACCCCTTACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCACCCTTCTGGATCTTCAACTCTCATCCAACTCCTCTGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGAGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTTCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCGTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTTGGCGGCCGGAATTTTGGAAGATTTGATGATGTGACTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGTAGTAATAATGTTAGTATTGTTCATTCTCAGACCAAACCGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

Coding sequence (CDS)

ATGGAACCCCTTACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCACCCTTCTGGATCTTCAACTCTCATCCAACTCCTCTGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGAGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTTCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCGTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTTGGCGGCCGGAATTTTGGAAGATTTGATGATGTGACTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGTAGTAATAATGTTAGTATTGTTCATTCTCAGACCAAACCGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

Protein sequence

MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVSIVHSQTKPDQDQTNFLDLSLKL

Homology

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-21
Identity = 76/183 (41.53%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 48  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 107
           PRVFSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 108 FDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRL 167
           F   A++PLHG   +R +LGI AHS  I KP   F G   TS        + Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKP--SFLGRQTTSLSHVFKQSIHQKPTIGKM 184

Query: 168 TPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS-----IVH-SQTKPDQDQTNFLDLS 203
            PE                      AGN  SN V+     I H    + D +Q   +DL+
Sbjct: 185 LPE----------------KFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLT 228

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-19
Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 16  EDDEREPAELSDDRS---TLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNA 75
           ED+ER+    S + +    + D     N S  +T+ ++FSCNYCQR F+SSQALGGHQNA
Sbjct: 23  EDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNA 82

Query: 76  HKRERTLAKRVQRFDWGAA----------IPLHGGAFDRRSLGIHAHSQQIQKPVGFFSG 135
           HKRERTLAKR QR    A+          +P HG   + RSLGI AHS  I   +  ++G
Sbjct: 83  HKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS--ISHKLSSYNG 142

Query: 136 -PGPTSQL-WPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNV 180
             G   Q+ W R L   QQPA+G+  P     +      +   P++      N RSNN+
Sbjct: 143 FGGHYGQINWSR-LPFDQQPAIGKF-PSMDNFHHHHHQMMMMAPSV------NSRSNNI 191

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 44/82 (53.66%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 27  DDRSTLLDLQLSSNSSDA----------TTKPRVFSCNYCQRKFFSSQALGGHQNAHKRE 86
           D  S+ L L LSS S  +          +   RVFSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 87  RTLAKRVQRFDWGAAIPLHGGA 99
           RTLAKR  R       P  G +
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSS 132

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 9   PLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDAT------TKPRVFSCNYCQRKFFS 68
           P S  GE    ++ ++  +     LDL+L+   +D T        PRVFSCNYC+RKF+S
Sbjct: 12  PASRGGEASSNQDLSK-PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYS 71

Query: 69  SQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHS 111
           SQALGGHQNAHKRERT+AKR                +   SLG+ AHS
Sbjct: 72  SQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.0e-14
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 21 EPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLA 80
          EP+ +S   S+      S+NSS    +PRVFSCNYCQRKF+SSQALGGHQNAHK ERTLA
Sbjct: 28 EPSSMSSSSSS------STNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLA 83

Query: 81 KR 83
          K+
Sbjct: 88 KK 83

[Close]

BLAST of Cp4.1LG06g03040 vs. NCBI nr
Match: XP_023536424.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414 bits (1064), Expect = 4.88e-146
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTKPDQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKPDQDQTNFLDLSLKL 202

[Close]

BLAST of Cp4.1LG06g03040 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 405 bits (1041), Expect = 6.83e-142
Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 101

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 102 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 161

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 162 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 221

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 222 IVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of Cp4.1LG06g03040 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402 bits (1033), Expect = 2.60e-141
Identity = 197/202 (97.52%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDERE AELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEDDERETAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 180

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of Cp4.1LG06g03040 vs. NCBI nr
Match: KAG6591545.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1029), Expect = 1.06e-140
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEE+DERE AELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEEDERETAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 180

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of Cp4.1LG06g03040 vs. NCBI nr
Match: XP_022976191.1 (zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 401 bits (1030), Expect = 3.13e-140
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDD+REPAELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 100

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 101 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 160

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPR LFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 161 SGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 220

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 221 IVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 3.30e-142
Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 101

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 102 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 161

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 162 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 221

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 222 IVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 401 bits (1030), Expect = 1.51e-140
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDD+REPAELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 100

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 101 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 160

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180
           SGPGPTSQLWPR LFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNNVS
Sbjct: 161 SGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 220

Query: 181 IVHSQTKPDQDQTNFLDLSLKL 202
           IVHSQTK DQDQTNFLDLSLKL
Sbjct: 221 IVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 5.16e-104
Identity = 163/213 (76.53%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60
           ME  TD NP SG+GEEDDE+E    S++RS+LL+LQLSSN SSD+T KPR+FSCNYCQRK
Sbjct: 1   MESHTDGNPFSGEGEEDDEKE---FSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRS-LGIHAHSQQIQKP-- 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRRS LG+HAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPA 120

Query: 121 VG-FFSGPGPTS--QLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGN 180
           VG FF G GP+S  QLWPRP+FMGQQPAVGRL  E GGRNFGR+DDV  W AIG+SNAGN
Sbjct: 121 VGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGN 180

Query: 181 E----RSNNVSIVHSQTKPDQDQTNFLDLSLKL 202
           E     +NN +IVHSQT+ D+DQTNFLDLSLKL
Sbjct: 181 ESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL
Match: A0A1S3BVD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 5.16e-104
Identity = 163/213 (76.53%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60
           ME  TD NP SG+GEEDDE+E    S++RS+LL+LQLSSN SSD+T KPR+FSCNYCQRK
Sbjct: 1   MESHTDGNPFSGEGEEDDEKE---FSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRS-LGIHAHSQQIQKP-- 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRRS LG+HAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPA 120

Query: 121 VG-FFSGPGPTS--QLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGN 180
           VG FF G GP+S  QLWPRP+FMGQQPAVGRL  E GGRNFGR+DDV  W AIG+SNAGN
Sbjct: 121 VGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGN 180

Query: 181 E----RSNNVSIVHSQTKPDQDQTNFLDLSLKL 202
           E     +NN +IVHSQT+ D+DQTNFLDLSLKL
Sbjct: 181 ESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL
Match: A0A6J1J146 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 2.86e-98
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           ME   D+ PL  D EED + E  ELSDDR T+LDL LS      TTKPR+FSCNYC RKF
Sbjct: 1   MELQADKTPLFEDVEEDGDEETGELSDDRRTVLDLHLS------TTKPRIFSCNYCHRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120
           FSSQALGGHQNAHKRERTLAKRVQRF W  AAIPLHGGAF  RSLGIHAH+QQIQKP+GF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHGRSLGIHAHAQQIQKPLGF 120

Query: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNV 180
           F GP  +  LWPRP+FMGQQPAV RLT   GGRNFGR+DDV  WPAIG SNAGNE  N+ 
Sbjct: 121 FGGPTSSPPLWPRPVFMGQQPAVERLTTTIGGRNFGRYDDVARWPAIGGSNAGNENINHD 180

Query: 181 SIVHSQTKPDQDQTNFLDLSLKL 202
           +IVHSQTK DQ QTNFLDLSLKL
Sbjct: 181 NIVHSQTKQDQGQTNFLDLSLKL 197

[Close]

BLAST of Cp4.1LG06g03040 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 76/183 (41.53%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 48  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 107
           PRVFSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 108 FDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRL 167
           F   A++PLHG   +R +LGI AHS  I KP   F G   TS        + Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKP--SFLGRQTTSLSHVFKQSIHQKPTIGKM 184

Query: 168 TPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS-----IVH-SQTKPDQDQTNFLDLS 203
            PE                      AGN  SN V+     I H    + D +Q   +DL+
Sbjct: 185 LPE----------------KFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLT 228

[Close]

BLAST of Cp4.1LG06g03040 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 39  SNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWGAA------- 98
           S +   +T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR    AA       
Sbjct: 92  SFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGF 151

Query: 99  --IPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQL-WPRPLFMGQQPAVGRLT 147
             +P H G +  R+LGI AHS    KP  +    G   Q+ W R + + QQPA+ +LT
Sbjct: 152 APVPFH-GQYSNRTLGIQAHSMS-HKPSSYNVYGGEYGQINWSR-IPLVQQPAIAKLT 206

[Close]

BLAST of Cp4.1LG06g03040 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 72/179 (40.22%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 16  EDDEREPAELSDDRS---TLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNA 75
           ED+ER+    S + +    + D     N S  +T+ ++FSCNYCQR F+SSQALGGHQNA
Sbjct: 23  EDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNA 82

Query: 76  HKRERTLAKRVQRFDWGAA----------IPLHGGAFDRRSLGIHAHSQQIQKPVGFFSG 135
           HKRERTLAKR QR    A+          +P HG   + RSLGI AHS  I   +  ++G
Sbjct: 83  HKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS--ISHKLSSYNG 142

Query: 136 -PGPTSQL-WPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNV 180
             G   Q+ W R L   QQPA+G+  P     +      +   P++      N RSNN+
Sbjct: 143 FGGHYGQINWSR-LPFDQQPAIGKF-PSMDNFHHHHHQMMMMAPSV------NSRSNNI 191

[Close]

BLAST of Cp4.1LG06g03040 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 44/82 (53.66%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 27  DDRSTLLDLQLSSNSSDA----------TTKPRVFSCNYCQRKFFSSQALGGHQNAHKRE 86
           D  S+ L L LSS S  +          +   RVFSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 87  RTLAKRVQRFDWGAAIPLHGGA 99
           RTLAKR  R       P  G +
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSS 132

[Close]

BLAST of Cp4.1LG06g03040 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 9   PLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDAT------TKPRVFSCNYCQRKFFS 68
           P S  GE    ++ ++  +     LDL+L+   +D T        PRVFSCNYC+RKF+S
Sbjct: 12  PASRGGEASSNQDLSK-PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYS 71

Query: 69  SQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHS 111
           SQALGGHQNAHKRERT+AKR                +   SLG+ AHS
Sbjct: 72  SQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g03040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	3.5e-21	41.53	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	2.5e-19	40.22	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	3.2e-14	53.66	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	3.2e-14	44.44	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	7.0e-14	64.52	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Cp4.1LG06g03040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536424.1	4.88e-146	100.00	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936656.1	6.83e-142	98.02	zinc finger protein 1-like [Cucurbita moschata]	[more]
KAG7024430.1	2.60e-141	97.52	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591545.1	1.06e-140	97.03	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022976191.1	3.13e-140	97.03	zinc finger protein 1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG06g03040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F839	3.30e-142	98.02	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	1.51e-140	97.03	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A5A7VC97	5.16e-104	76.53	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BVD7	5.16e-104	76.53	zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1	[more]
A0A6J1J146	2.86e-98	73.89	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g03040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	2.5e-22	41.53	zinc-finger protein 1	[more]
AT5G10970.1	1.0e-20	49.15	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.8e-20	40.22	zinc finger protein 3	[more]
AT1G66140.1	2.2e-15	53.66	zinc finger protein 4	[more]
AT1G24625.1	2.2e-15	44.44	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 27..87 e-value: 6.8E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 20..202
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 53..73
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 51..78 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 47..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g03040.1	Cp4.1LG06g03040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane