Cp4.1LG06g02300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g02300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DUF4408 domain-containing protein
Location	Cp4.1LG06: 1277372 .. 1278166 (+)
RNA-Seq Expression	Cp4.1LG06g02300
Synteny	Cp4.1LG06g02300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAGAGGCTGAAATCGATTAATCTTTATGCTTATAGATCCGAAGAGCCGGCGACTGTGTTCGAGAAACCGCCTGAAACCGACACTCGTTACGCTAATTTCGAGCATCCGCAACTGGTTAGATCTCCTTCTGTACTTCAGCGGCTTAAGTTTAGTTTCTCAGGCTACAAACCGGAGGAGTCTTTCCAATCTCCGCCGCCGGAAACTGTATTCGATAAATCGCCTGGAATCGACACTCATTACGGTAATTTCGAACATCCGCAACTGGTTAGATCTCCTTCTATGCTTCAGCGGCTCAAGTTTAACTTCTATGGCTCTAAATCCGAGGAGTCTTTCGAATCTCCGCCTCCGTCTGTTCCTGCGGTTCAGAAAATCGAGGATGTCCAGATCCGTCGGAGGGAGGATGAGTCGAAACGAGTGGAGGAAGAGGAGGATGAAGATGACGAACAGTCTATGGAAGAGGTTTACAGCAAACTCCATGGCGATCACTTCACGAGGACGAAATCCGACACGATGCCGAGTGCGGGTGAGTTTCCGACGAAATTAGCAAGGAAGATGAAGAAATCGGCGAGTTCGAAATCTGCATTCTCGCATTTCGAAGCGGATGAAATCGTGGAGAGTCGCCGTCCAGCGACAGTGAAAGAAGGAAAAGAGAAAATGACGGAAATAGACGACGAAGTGGACGCTAAGGCGGACGACTTCATCAACAAATTCAAGCAACAGTTGAAGTTGCAGAGGCTGGAATCCATACTCAAGTACAAGGAGATTGTCGGCAGAGGGAATGCGAAATAG

mRNA sequence

ATGCTTCAGAGGCTGAAATCGATTAATCTTTATGCTTATAGATCCGAAGAGCCGGCGACTGTGTTCGAGAAACCGCCTGAAACCGACACTCGTTACGCTAATTTCGAGCATCCGCAACTGGTTAGATCTCCTTCTGTACTTCAGCGGCTTAAGTTTAGTTTCTCAGGCTACAAACCGGAGGAGTCTTTCCAATCTCCGCCGCCGGAAACTGTATTCGATAAATCGCCTGGAATCGACACTCATTACGGTAATTTCGAACATCCGCAACTGGTTAGATCTCCTTCTATGCTTCAGCGGCTCAAGTTTAACTTCTATGGCTCTAAATCCGAGGAGTCTTTCGAATCTCCGCCTCCGTCTGTTCCTGCGGTTCAGAAAATCGAGGATGTCCAGATCCGTCGGAGGGAGGATGAGTCGAAACGAGTGGAGGAAGAGGAGGATGAAGATGACGAACAGTCTATGGAAGAGGTTTACAGCAAACTCCATGGCGATCACTTCACGAGGACGAAATCCGACACGATGCCGAGTGCGGGTGAGTTTCCGACGAAATTAGCAAGGAAGATGAAGAAATCGGCGAGTTCGAAATCTGCATTCTCGCATTTCGAAGCGGATGAAATCGTGGAGAGTCGCCGTCCAGCGACAGTGAAAGAAGGAAAAGAGAAAATGACGGAAATAGACGACGAAGTGGACGCTAAGGCGGACGACTTCATCAACAAATTCAAGCAACAGTTGAAGTTGCAGAGGCTGGAATCCATACTCAAGTACAAGGAGATTGTCGGCAGAGGGAATGCGAAATAG

Coding sequence (CDS)

ATGCTTCAGAGGCTGAAATCGATTAATCTTTATGCTTATAGATCCGAAGAGCCGGCGACTGTGTTCGAGAAACCGCCTGAAACCGACACTCGTTACGCTAATTTCGAGCATCCGCAACTGGTTAGATCTCCTTCTGTACTTCAGCGGCTTAAGTTTAGTTTCTCAGGCTACAAACCGGAGGAGTCTTTCCAATCTCCGCCGCCGGAAACTGTATTCGATAAATCGCCTGGAATCGACACTCATTACGGTAATTTCGAACATCCGCAACTGGTTAGATCTCCTTCTATGCTTCAGCGGCTCAAGTTTAACTTCTATGGCTCTAAATCCGAGGAGTCTTTCGAATCTCCGCCTCCGTCTGTTCCTGCGGTTCAGAAAATCGAGGATGTCCAGATCCGTCGGAGGGAGGATGAGTCGAAACGAGTGGAGGAAGAGGAGGATGAAGATGACGAACAGTCTATGGAAGAGGTTTACAGCAAACTCCATGGCGATCACTTCACGAGGACGAAATCCGACACGATGCCGAGTGCGGGTGAGTTTCCGACGAAATTAGCAAGGAAGATGAAGAAATCGGCGAGTTCGAAATCTGCATTCTCGCATTTCGAAGCGGATGAAATCGTGGAGAGTCGCCGTCCAGCGACAGTGAAAGAAGGAAAAGAGAAAATGACGGAAATAGACGACGAAGTGGACGCTAAGGCGGACGACTTCATCAACAAATTCAAGCAACAGTTGAAGTTGCAGAGGCTGGAATCCATACTCAAGTACAAGGAGATTGTCGGCAGAGGGAATGCGAAATAG

Protein sequence

MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPEESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSVPAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFPTKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFKQQLKLQRLESILKYKEIVGRGNAK

Homology

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BLAST of Cp4.1LG06g02300 vs. ExPASy Swiss-Prot
Match: F4K956 (Pathogen-associated molecular patterns-induced protein A70 OS=Arabidopsis thaliana OX=3702 GN=A70 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 105/324 (32.41%), Postives = 142/324 (43.83%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPAT-VFEKPPETDT------RYANFEHPQLVRSPSVLQRLKFS 60
           ++ R+KSIN + Y+   P T +F      D        Y +     L R+PS+L R+K  
Sbjct: 62  IIDRVKSINFHLYKFPHPETELFSMTAHHDIIGSDLHVYPDPNPAPLQRAPSLLDRVKSI 121

Query: 61  FSGYKPEESFQSPPPETVFDKSPGIDTHYGNFEHP---QLVRSPSMLQRLK------FNF 120
              Y     F+ P   T  D      +H      P    L R+PS+L R+K      F F
Sbjct: 122 NMSY-----FKFPHDVTGSDPHSHSHSHLDLHPDPAPAPLQRAPSLLDRVKSINMSYFKF 181

Query: 121 YGSKSEES----------FESPPPSVPAVQKIEDVQIRRREDE----------------- 180
                EE+          FES P  +  V  I+  + R  E++                 
Sbjct: 182 QQYNPEENDYAHHTEPTRFESIPTRMGRVDPIDISKFRIPEEDQPTGTGVNSQINPPGLT 241

Query: 181 --------------SKRVEEEEDEDDEQSMEEVYSKLHGDH-FTRTKSDTMPSAGEFPTK 240
                         S     + D D +Q+ + V   LH +H   R+KS++     +   K
Sbjct: 242 RAPSILERVKSIKLSSFYRSDPDLDQKQNPDPV---LHEEHKHVRSKSESKKPVKK-KKK 301

Query: 241 LARKMKKSASSKSAF----SHFEADEIVES---RRPATVK-EGKEKMTEIDDEVDAKADD 259
              KM KSAS KS F    SH EA E VES   RRP T + E      + +D VDAKA D
Sbjct: 302 ALTKMTKSASEKSGFGFAGSHAEAPETVESLERRRPDTTRVERSTSFGDGEDGVDAKASD 361

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BLAST of Cp4.1LG06g02300 vs. NCBI nr
Match: XP_023535532.1 (uncharacterized protein LOC111796947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508 bits (1309), Expect = 2.95e-180
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. NCBI nr
Match: XP_022977068.1 (uncharacterized protein LOC111477248 [Cucurbita maxima])

HSP 1 Score: 501 bits (1291), Expect = 1.63e-177
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ESF SPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESFLSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAV KIEDVQIRRREDESKRVEEEEDEDDEQ+MEEVYSK+HGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVHKIEDVQIRRREDESKRVEEEEDEDDEQTMEEVYSKVHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. NCBI nr
Match: XP_022936387.1 (uncharacterized protein LOC111443022 [Cucurbita moschata])

HSP 1 Score: 501 bits (1289), Expect = 3.28e-177
Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETD R ANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDARCANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ES QSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESLQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. NCBI nr
Match: KAG6591465.1 (Pathogen-associated molecular patterns-induced protein A70, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498 bits (1283), Expect = 2.69e-176
Identity = 260/264 (98.48%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETD RYANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDARYANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ES QSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESLQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAVQKIEDVQI RREDESKRVEEEEDEDDEQSMEEVYSKL+GDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVQKIEDVQICRREDESKRVEEEEDEDDEQSMEEVYSKLNGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. NCBI nr
Match: KAG7024345.1 (hypothetical protein SDJN02_13159, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498 bits (1283), Expect = 2.69e-176
Identity = 260/264 (98.48%), Postives = 260/264 (98.48%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETD RYANFEHPQLVRSPSVLQRLKFSFSGYK E
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDARYANFEHPQLVRSPSVLQRLKFSFSGYKLE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ES QSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESLQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAVQKIEDVQI RREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVQKIEDVQIHRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL
Match: A0A6J1INY3 (uncharacterized protein LOC111477248 OS=Cucurbita maxima OX=3661 GN=LOC111477248 PE=4 SV=1)

HSP 1 Score: 501 bits (1291), Expect = 7.87e-178
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ESF SPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESFLSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAV KIEDVQIRRREDESKRVEEEEDEDDEQ+MEEVYSK+HGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVHKIEDVQIRRREDESKRVEEEEDEDDEQTMEEVYSKVHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL
Match: A0A6J1F8B2 (uncharacterized protein LOC111443022 OS=Cucurbita moschata OX=3662 GN=LOC111443022 PE=4 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 1.59e-177
Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSFSGYKPE 60
           MLQRLKSINLYAYRSEEPATVFEKPPETD R ANFEHPQLVRSPSVLQRLKFSFSGYKPE
Sbjct: 68  MLQRLKSINLYAYRSEEPATVFEKPPETDARCANFEHPQLVRSPSVLQRLKFSFSGYKPE 127

Query: 61  ESFQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 120
           ES QSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV
Sbjct: 128 ESLQSPPPETVFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSV 187

Query: 121 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 180
           PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP
Sbjct: 188 PAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFP 247

Query: 181 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 240
           TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK
Sbjct: 248 TKLARKMKKSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFK 307

Query: 241 QQLKLQRLESILKYKEIVGRGNAK 264
           QQLKLQRLESILKYKEIVGRGNAK
Sbjct: 308 QQLKLQRLESILKYKEIVGRGNAK 331

[Close]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL
Match: A0A0A0L0P6 (DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646070 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 1.50e-132
Identity = 216/313 (69.01%), Postives = 236/313 (75.40%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLKFSF------ 60
           +LQRLKS+N Y+YRSEEPATV EKPP  D  YAN+EHPQLVRSPS+LQR KFSF      
Sbjct: 68  VLQRLKSMNPYSYRSEEPATVLEKPPGIDAHYANYEHPQLVRSPSMLQRFKFSFPSYKPE 127

Query: 61  --------------------------------------------SGYKPEESFQSPPPET 120
                                                       SGYKPEESFQSPPP T
Sbjct: 128 ESFQSPPSATAFEKPHGIDAHSANYQHPQLVRSPSVLQRLKSSFSGYKPEESFQSPPPVT 187

Query: 121 VFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYGSKSEESFESPPPSVPAVQKIEDVQ 180
             +KS G DTHY NFEHPQLVRSPSMLQRLKFNFYG KSEESF+SPPP+V       + Q
Sbjct: 188 HVEKSAGGDTHYTNFEHPQLVRSPSMLQRLKFNFYGYKSEESFQSPPPTVS------EAQ 247

Query: 181 IRRREDESKRVEEEE-DEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFPTKLARKMKK 240
           IRR+EDESKRVE+E+ DED E +M+EV+SKLHGDHF RTKSDTMP+AGEFPTKL+RKMKK
Sbjct: 248 IRRKEDESKRVEDEQMDEDQEPTMDEVFSKLHGDHFNRTKSDTMPTAGEFPTKLSRKMKK 307

Query: 241 SASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFKQQLKLQRLE 262
           SASSKS FSHFEADEIVESRRPATVKEGKEKMTEI+DEVDA+ADDFINKFKQQLKLQRLE
Sbjct: 308 SASSKSTFSHFEADEIVESRRPATVKEGKEKMTEIEDEVDARADDFINKFKQQLKLQRLE 367

[Close]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL
Match: A0A1S3BUJ6 (uncharacterized protein LOC103493663 OS=Cucumis melo OX=3656 GN=LOC103493663 PE=4 SV=1)

HSP 1 Score: 380 bits (975), Expect = 4.65e-129
Identity = 211/316 (66.77%), Postives = 239/316 (75.63%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPS--------------- 60
           +LQRLKS+N YAYRSEEPATVFEKPP  D  YAN+EHPQLVRSPS               
Sbjct: 68  VLQRLKSMNPYAYRSEEPATVFEKPPGIDAHYANYEHPQLVRSPSMLQRFKFSFPSYKPE 127

Query: 61  -----------------------------------VLQRLKFSFSGYKPEESFQSPPPET 120
                                              VLQRLKFSFSGYKPEESFQSPPP T
Sbjct: 128 ESFQSPPSATTFEKAHEIDTHSANYQHPQLVRSPSVLQRLKFSFSGYKPEESFQSPPPVT 187

Query: 121 VFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYG-SKSEESFESPPPSVPAVQKIEDV 180
             +K  G D HY NFEHPQLVRSPSMLQR+KFNFYG +K+EESF+SPPP+V       +V
Sbjct: 188 HVEKPAGGDAHYSNFEHPQLVRSPSMLQRIKFNFYGHNKAEESFQSPPPTVS------EV 247

Query: 181 QIRRREDESKRVEEEE-DEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFPTKLARKMK 240
           QIRR++DESKR+E+E+ D D E +M+EV+SKLHGDHF RTKSDTMP++GEFPTKL++KMK
Sbjct: 248 QIRRKDDESKRMEDEQTDGDQEPTMDEVFSKLHGDHFNRTKSDTMPTSGEFPTKLSKKMK 307

Query: 241 KSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFKQQLKLQRL 264
           KSASSKS FSHFEAD+IVESRRPATVKEG+EK+TEI+DEVDA+ADDFINKFKQQLKLQRL
Sbjct: 308 KSASSKSTFSHFEADDIVESRRPATVKEGREKITEIEDEVDARADDFINKFKQQLKLQRL 367

[Close]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL
Match: A0A5A7VC03 (Myb-like protein AA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002170 PE=4 SV=1)

HSP 1 Score: 380 bits (975), Expect = 4.65e-129
Identity = 211/316 (66.77%), Postives = 239/316 (75.63%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPS--------------- 60
           +LQRLKS+N YAYRSEEPATVFEKPP  D  YAN+EHPQLVRSPS               
Sbjct: 68  VLQRLKSMNPYAYRSEEPATVFEKPPGIDAHYANYEHPQLVRSPSMLQRFKFSFPSYKPE 127

Query: 61  -----------------------------------VLQRLKFSFSGYKPEESFQSPPPET 120
                                              VLQRLKFSFSGYKPEESFQSPPP T
Sbjct: 128 ESFQSPPSATTFEKAHEIDTHSANYQHPQLVRSPSVLQRLKFSFSGYKPEESFQSPPPVT 187

Query: 121 VFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFYG-SKSEESFESPPPSVPAVQKIEDV 180
             +K  G D HY NFEHPQLVRSPSMLQR+KFNFYG +K+EESF+SPPP+V       +V
Sbjct: 188 HVEKPAGGDAHYSNFEHPQLVRSPSMLQRIKFNFYGHNKAEESFQSPPPTVS------EV 247

Query: 181 QIRRREDESKRVEEEE-DEDDEQSMEEVYSKLHGDHFTRTKSDTMPSAGEFPTKLARKMK 240
           QIRR++DESKR+E+E+ D D E +M+EV+SKLHGDHF RTKSDTMP++GEFPTKL++KMK
Sbjct: 248 QIRRKDDESKRMEDEQTDGDQEPTMDEVFSKLHGDHFNRTKSDTMPTSGEFPTKLSKKMK 307

Query: 241 KSASSKSAFSHFEADEIVESRRPATVKEGKEKMTEIDDEVDAKADDFINKFKQQLKLQRL 264
           KSASSKS FSHFEAD+IVESRRPATVKEG+EK+TEI+DEVDA+ADDFINKFKQQLKLQRL
Sbjct: 308 KSASSKSTFSHFEADDIVESRRPATVKEGREKITEIEDEVDARADDFINKFKQQLKLQRL 367

[Close]

BLAST of Cp4.1LG06g02300 vs. TAIR 10
Match: AT2G26110.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-44
Identity = 125/236 (52.97%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 39  QLVRSPSVLQRLK-FSFSGY-KPEESFQSPPPETVFDKSPGIDTHYGNFE--HPQLVRSP 98
           Q+ RSPS++ RLK  +FS +  P++S    PP T  D S        + E   P L RSP
Sbjct: 82  QIQRSPSMIHRLKSINFSSFTSPDKSHLEFPPSTPEDNSNNNFHQPASIEQNQPFLSRSP 141

Query: 99  SMLQRLK-FNFYGSKSEES---FESPPPSVPAVQKIEDVQIRRREDESKRVEEEEDEDDE 158
           S+L R+K FN Y   S+E     E+ PPSV    K E VQ    E E K    EE E++E
Sbjct: 142 SVLHRIKSFNLYNYISQEPTNIIEASPPSVTVETKQEQVQ----EQEVK----EEQEEEE 201

Query: 159 QSMEEVYSKLHGDHFTRTKSDTMPSAGEFPTKLARKMKKSASSKSAFSHFEADEI-VESR 218
           QS+EEVYSKL+ +H  RTKSDT P+AG  P KL +KMKKSAS+KS FSHF+ DEI VE+R
Sbjct: 202 QSLEEVYSKLNLNHVARTKSDTEPAAGIRPPKLPKKMKKSASTKSPFSHFQEDEISVEAR 261

Query: 219 RPATVKEGK-EKMTEIDDEVDAKADDFINKFKQQLKLQRLESILKYKEIVGRGNAK 265
           RPATVK  +   + E D+EVDAKADDFIN+FK QLKLQR++SI KYKE+V + N K
Sbjct: 262 RPATVKVPRVTTVEEADEEVDAKADDFINRFKHQLKLQRIDSITKYKEMVKKRNDK 309

[Close]

BLAST of Cp4.1LG06g02300 vs. TAIR 10
Match: AT5G56980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-15
Identity = 105/324 (32.41%), Postives = 142/324 (43.83%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPAT-VFEKPPETDT------RYANFEHPQLVRSPSVLQRLKFS 60
           ++ R+KSIN + Y+   P T +F      D        Y +     L R+PS+L R+K  
Sbjct: 62  IIDRVKSINFHLYKFPHPETELFSMTAHHDIIGSDLHVYPDPNPAPLQRAPSLLDRVKSI 121

Query: 61  FSGYKPEESFQSPPPETVFDKSPGIDTHYGNFEHP---QLVRSPSMLQRLK------FNF 120
              Y     F+ P   T  D      +H      P    L R+PS+L R+K      F F
Sbjct: 122 NMSY-----FKFPHDVTGSDPHSHSHSHLDLHPDPAPAPLQRAPSLLDRVKSINMSYFKF 181

Query: 121 YGSKSEES----------FESPPPSVPAVQKIEDVQIRRREDE----------------- 180
                EE+          FES P  +  V  I+  + R  E++                 
Sbjct: 182 QQYNPEENDYAHHTEPTRFESIPTRMGRVDPIDISKFRIPEEDQPTGTGVNSQINPPGLT 241

Query: 181 --------------SKRVEEEEDEDDEQSMEEVYSKLHGDH-FTRTKSDTMPSAGEFPTK 240
                         S     + D D +Q+ + V   LH +H   R+KS++     +   K
Sbjct: 242 RAPSILERVKSIKLSSFYRSDPDLDQKQNPDPV---LHEEHKHVRSKSESKKPVKK-KKK 301

Query: 241 LARKMKKSASSKSAF----SHFEADEIVES---RRPATVK-EGKEKMTEIDDEVDAKADD 259
              KM KSAS KS F    SH EA E VES   RRP T + E      + +D VDAKA D
Sbjct: 302 ALTKMTKSASEKSGFGFAGSHAEAPETVESLERRRPDTTRVERSTSFGDGEDGVDAKASD 361

[Close]

BLAST of Cp4.1LG06g02300 vs. TAIR 10
Match: AT4G26130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 5.5e-14
Identity = 87/278 (31.29%), Postives = 119/278 (42.81%), Query Frame = 0


Query: 1   MLQRLKSINLYAYRSEEPATVFEKPPETDTRYANFEHPQLVRSPSVLQRLK------FSF 60
           ++ R+KSIN + Y S          PE++  Y+  + P     PS+LQR+K      F F
Sbjct: 65  LIDRVKSINFHLYNSPS--------PESEIHYSGSD-PNPNPPPSLLQRVKSINMPYFKF 124

Query: 61  SGYKPEESF-----QSPPPET----VFDKSPGIDTHYGNFEHPQLVRSPSMLQRLKFNFY 120
             +  E  +      + P ET      DK P  D        P+   +PS+LQR+K    
Sbjct: 125 PQHNSEGDYAAYELMTQPDETNRVDPIDKIPEDDV----TTEPRF-GAPSLLQRVK---- 184

Query: 121 GSKSEESFESPPPSVPAVQKIEDVQIRRREDESKRVEEEEDEDDEQSMEEVYSKLHGDHF 180
             K    + S P   P VQ                                         
Sbjct: 185 SIKLPSLYRSDPDPTPEVQT---------------------------------------H 244

Query: 181 TRTKSDTMPSAGEFPTKLARKMKKSASSKS-AFSHFEADEIVESRRPATVKEGKEKMTEI 240
           TRTKS++   A +   K  +KM KSAS +       E  E VE RRP T++   E+ T I
Sbjct: 245 TRTKSESSKPATKKKKKATKKMMKSASERHIGREEEETVEAVEKRRPETMR--VERTTSI 283

Query: 241 DD----EVDAKADDFINKFKQQLKLQRLESILKYKEIV 259
            D     VD KA +FINKFKQQLKLQRL+S L+Y+E++
Sbjct: 305 GDGGEEGVDDKASNFINKFKQQLKLQRLDSFLRYREML 283

[Close]

BLAST of Cp4.1LG06g02300 vs. TAIR 10
Match: AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 4.0e-04
Identity = 21/49 (42.86%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 213 TVKEGKEKMTEIDDEVDAKADDFINKFKQQLKLQRLESILKYKEIVGRG 262
           T KE + +  +++DE+D  AD FI++F +Q+KLQ+L S  +Y+E++ RG
Sbjct: 138 TSKEEEGENFKLEDEIDHVADLFISRFHKQMKLQKLLSFKRYQEMLARG 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g02300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K956	1.4e-14	32.41	Pathogen-associated molecular patterns-induced protein A70 OS=Arabidopsis thalia...	[more]

BLAST of Cp4.1LG06g02300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535532.1	2.95e-180	100.00	uncharacterized protein LOC111796947 [Cucurbita pepo subsp. pepo]	[more]
XP_022977068.1	1.63e-177	98.48	uncharacterized protein LOC111477248 [Cucurbita maxima]	[more]
XP_022936387.1	3.28e-177	98.86	uncharacterized protein LOC111443022 [Cucurbita moschata]	[more]
KAG6591465.1	2.69e-176	98.48	Pathogen-associated molecular patterns-induced protein A70, partial [Cucurbita a...	[more]
KAG7024345.1	2.69e-176	98.48	hypothetical protein SDJN02_13159, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG06g02300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INY3	7.87e-178	98.48	uncharacterized protein LOC111477248 OS=Cucurbita maxima OX=3661 GN=LOC111477248...	[more]
A0A6J1F8B2	1.59e-177	98.86	uncharacterized protein LOC111443022 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A0A0L0P6	1.50e-132	69.01	DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646070 PE=...	[more]
A0A1S3BUJ6	4.65e-129	66.77	uncharacterized protein LOC103493663 OS=Cucumis melo OX=3656 GN=LOC103493663 PE=...	[more]
A0A5A7VC03	4.65e-129	66.77	Myb-like protein AA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G...	[more]

BLAST of Cp4.1LG06g02300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26110.1	3.0e-44	52.97	Protein of unknown function (DUF761)	[more]
AT5G56980.1	1.0e-15	32.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G26130.1	5.5e-14	31.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47920.1	4.0e-04	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80
None	No IPR available	PANTHER	PTHR33098:SF53	OS06G0566500 PROTEIN	coord: 37..262
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 37..262
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 225..258 e-value: 1.1E-16 score: 60.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g02300.1	Cp4.1LG06g02300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane