Cp4.1LG05g11610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g11610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic
Location	Cp4.1LG05: 7968222 .. 7972369 (+)
RNA-Seq Expression	Cp4.1LG05g11610
Synteny	Cp4.1LG05g11610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCGCGCGGAGCCTGAGAAAAACGCAAGCAGCAGCGTGCAAAGGGGCAGCATCCACATGGTGAGCAAAGGAACGCCTCTTGCGAACCGCAAAACCCCAATTAGCAGCCACAAAAATTAAGGAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCCATTTCTCTTCTCCGAGAATCACTGCAATCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTCAGACGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTATGGATAGTTTTCTATAAAATATTCAGCGTTCATGCCGTTTCTCTGTTTCGAATTTCCATAAGCATATTCATAATTCTCTTCGAATTTCGGAGAGATGAAACATTCTTCTGCTTCATCTTGGGATAAACATTGTCAAAACTCATGAGCATTCTTTTTAAACCAATTGTTATGGGTAAGAGTGAGAATCAAAAAGTAGAGTAGATGGGAATAACAACATTATTCCTACTTTTTCGAAGTGCTTAAAATCATTGGTTTAGAAACACACTGGATTAGTTCTTCGAATTAATAATATTTAAGGCTTAATAAACAACTTTTCATTTTTTTAAACATTTTATATTGTGGGTAGTTGCTAATCTAGCCTAATTGGAATAGAATGCTGCAAAAATAATTGCTACAACTTTTTTGTATTAAAAGTTTAACATCTGGCGTGGAGGAATCTCTACCAACCTCTTAGTTGAGCTTGCTAGTTTATGCTTTAATCTATTTAGTTGAGATAACATAACTATTAATTAATGATTAACATAGCTATCAACTAGTGATTAATATAACTGTAGTTCATTACCATCCACTGTGTTATTGATTAAACTAATGGACATCATTAAAGAAGTGATGAATAACTTTTTTAATAACAAACTCTATATATTCAAATATTTTAGCTACACCCATCCATTCTTTTTTATTCTTAAAACCAGGCTAAGATCTCGGAAATTGTTTGTAACAGTTGAAAACCTTAAATAAAAAAAGAAAAGNTATTCAAATATTTTAGCTACACCCATCCATTCTTTTTTATTCGTAAAACCAGGCTAAGATCTCGGAAATTGTTTGTTACAGTTGAAAACCTTAAATAAAAAAAAGAAAGGAAAGATAAAAGAGGAGGTGTCTCAACCATGTTACTGAAAAATGATTTAATGTAGTAATGACAAGGACAAGACTATTATTTGAGAAGTTTTATCATTCTTTAGGGATGAAATTGAAACTTTTGAATCATAGAGACCAATATAGAAGATGTAGCCAAATCACAGGAACCAAATTGAGCCTAAATCTTGAAACTTTTAAAATCAAACGGATGAAATTCAATTGAATCCCATTGAATAAGGTGGATGATTTAGAAGCATTATGTGTGGGAGTGCAGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCAAGGGTACCTAACCAACTAATCATCCAATCTAATAATATTGAATTTGAAGAATGCTTTGAATCTTTCTGTGCTTACTTTTTTGTTTGTTTCAGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGTCCTGAGAATATATCTGGCAAGTTCTTCCATTATTGATTATTGGAGTTCTGGCTTGGGTGAAATAATCATTTCTTTGTCACTTCATTCAATAATTCACTTGCTGTTTTTATGTTAATTTTCAAGGCCACAAATAGAGGAAAGAGTTCAAAAATATCCTTAAAAGAACAAATATTATCATAATTTATGGCCTAAACTTTTAGTCTATTGGTAGTTTAACCGTAGATGGGATTGTGGTTTCAGGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTAAGTTACTCTTAACTACAAACTCATTATTTCACTCTTCCTCTCACTTTAGCTACAAAATTTAAAGGACATGCTTTGTTTTTGCCTTTGCTTTTAATAGTAGGCACTCAAACTTTGTATTATTTCGATTGATGAATTCTTTTGTGAAAGAACCTGAAATGTATATGGTGATATGAGCATTGAAAAATGTGGATTGGTTATTCATTTACTAACGNTAAAGGACATGCTTTGTTTTTGCCTTTGCTTTTAATAGTAGGCACTCAAACTTTGTATTATTTCGATTGATGAATTCTTTTGTGAAAGAACCTGAAATGTATGGTGATATGAGCATTGAAAAATGTGGATTGGTTATTCATTTACTAAGGCACAAGAAATTTGGTTGAGTTATTTATTTCTTATTCCATGTGGGGCAAGTTTTCATGTGTATCTTAAGCATTCTTTGTGAGTCCGATTGTTGGATCATTACATGCCTTTGTTCAATTTAAATGATAAACCTTAATTTTGATGACGAGTCATACTTTGATTTTCTCTAACTTATCACGTTAAACTTTTGGGTTTCGCTCTAGAGCTGTCATCGCTGCAATGTTATTTGCTCGCCGTTTCAAATAGTAATTCACTTGCTCGGCCTTGTGTGCGTTGTGAGGGGACTGTTAAGAATATGCTAATTCTTTTTAATTTACCACCCTTTCTGTTGCCTTTAGTTTTGAGTGTGGAGTTCATTTAATCTTCTCTTGATTCTTTGGAAGGAAAGAAATCAAAGAATTGATAAGTTTTCGCCTTTTGAGCCTTTCGGTTCGAGTGTGCAGTTTTTTGCTTCTTGGTGGTGTTCTACAACAAAATGTTCTTTGGTTTGTAATTATAGTCTTCTTATGGCTGTTCTAGATGTTCTTTTGTAGCTTGTTTGGATTGGGGATATTTTATTCTCCTCTTGAATGTATTCTCAGTTTCTCATTTTCGTTGTAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTATTATCGAATACCGATATGATAAAATTCAGAGAAAAATTATTCTAATACGAAATACTATCTAAATCTTCATTTAGCTAAAGAAAAAAAATCAATATCTACAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGGTAATGAATTGAGTTGAGGCCTCTTGTTTCTCCTCTTCCTGTATTCTACTTCACAACTTAGCAATGAGTTTATATGTTTGTAGAAAGGATGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTGGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAAATACAAAGCTAGGTAAGAAATATTCAAAAGCAACTTGGTTTCTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGTATGATTCTACATAGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTAGTTATGAAAGGTTGTGGAAAGAGAATTACTAAACCTCTTACTTTAGGACATATGGTTAACCAATCGAGTTTTGCTTAGCTTATTATCAATAACCCGTATTTTAGAGACGGAGAGCCCATAACAACCCTACTTGGCCACTCTTCCCATCTTTATTTGCCTT

mRNA sequence

CCCTCGCGCGGAGCCTGAGAAAAACGCAAGCAGCAGCGTGCAAAGGGGCAGCATCCACATGGTGAGCAAAGGAACGCCTCTTGCGAACCGCAAAACCCCAATTAGCAGCCACAAAAATTAAGGAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCCATTTCTCTTCTCCGAGAATCACTGCAATCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTCAGACGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGATGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTGGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAAATACAAAGCTAGGTAAGAAATATTCAAAAGCAACTTGGTTTCTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGTATGATTCTACATAGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTAGTTATGAAAGGTTGTGGAAAGAGAATTACTAAACCTCTTACTTTAGGACATATGGTTAACCAATCGAGTTTTGCTTAGCTTATTATCAATAACCCGTATTTTAGAGACGGAGAGCCCATAACAACCCTACTTGGCCACTCTTCCCATCTTTATTTGCCTT

Coding sequence (CDS)

ATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTCAGACGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCTGCATTGTATTCATGGGGAGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCGACACCAGTGGAGGATTTTGTACAAACCACATTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGATGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCAGTTTACTGTAGAGATCGGTATTACCGAGCATTGGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTCAAGTAA

Protein sequence

MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGGRFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK

Homology

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BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 6.6e-112
Identity = 207/286 (72.38%), Postives = 235/286 (82.17%), Query Frame = 0


Query: 37  RNRRLNRRVLAKALKDDQKDGAGG-RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   F GQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLI--- 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLI   
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 ---GWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLV 216
              GWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVI MLKQTL+
Sbjct: 167 IYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLI 226

Query: 217 GTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINK---KYNLRKDELLRL 276
           GTG +LVSA +LF+F+TPVEDF +TT  S ++      P+  I++   K+N+RK++LLRL
Sbjct: 227 GTGALLVSAFVLFVFATPVEDFFKTTLGSTEN-----QPEVSISRTSNKFNIRKEQLLRL 286

Query: 277 PVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 313
           PV+V+ DD+LAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 287 PVDVVTDDDLAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 327

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BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-26
Identity = 63/156 (40.38%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           VP EQ+PVNEY+SLK+S  + W  L +  +  ++  + L++   L  PV  + F  ++ P
Sbjct: 10  VPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKI-TITLIATCFLVSPVLLSIFPIAKLP 69

Query: 135 LR-----FVLAAGIGTLLLVSL-IGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLAR 194
           L+     F++++ I   +L+ L +GWSYV  RL+SA + YEESGWYDGQ+WVKP E+L +
Sbjct: 70  LKFFFSEFIISSLITCFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEILVK 129

Query: 195 DRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIF 225
           DR +G Y+V P++N +K TL    ++  +  +LF +
Sbjct: 130 DRFIGLYEVFPLLNKIKNTLSCLSLMTTAPAILFFY 164

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BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.1e-25
Identity = 63/156 (40.38%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           VP EQ+PV+EY+SLK+S  + W  L    +  ++  + L+   +L  P+  + F  ++ P
Sbjct: 10  VPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKI-TIALLLNCLLVSPILLSIFPITKLP 69

Query: 135 LRFVLAAGI------GTLLLVSLIGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLAR 194
           L+F  +  I      G +L+   +GWSYV  RL+SA + YEESGWYDGQ+WVKP E+L +
Sbjct: 70  LKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEILLK 129

Query: 195 DRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIF 225
           DR +G Y+V P++N +K TL    +++   VLLF +
Sbjct: 130 DRFIGLYEVFPLLNKIKNTLSFLSLMISGPVLLFFY 164

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BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.9e-22
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           +P EQ+P+NEY  L +S L++W       +F  L  ++ + F +L   +   +      P
Sbjct: 7   IPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLFTIYSIGF-LLTFLITFYNDLFIVHP 66

Query: 135 LRFVLAAGIG--TLLLVSL----IGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLAR 194
           +   +   IG   +L++ L    +GWSY+  RLLSA + YEESGWYDGQ+WVK  EVL +
Sbjct: 67  VNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEESGWYDGQIWVKSSEVLIQ 126

Query: 195 DRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLL 222
           DRL+G Y+V+PV+N LKQTL G  ++++   LL
Sbjct: 127 DRLIGIYQVRPVLNRLKQTL-GVVILILGFTLL 157

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.1e-13
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWG-ELGAGPF-FLRLGGLWLVSFTVLGVPVAAASFNPSR 134
           VP  Q P+NEY+ L  +  +SW  ++G   + FL    L L  F  + +    + +    
Sbjct: 5   VPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCICLNFLDSKYETGL 64

Query: 135 EPLRFVLAAGIGTLLLVSLIGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLL 194
             L  +    I  + L + +G+ Y+  RLL + +PYEES WYDGQ+WVK    L +DRL+
Sbjct: 65  YSL-ILSTLFICLICLRTYLGFRYIYVRLLKSALPYEESSWYDGQVWVKNINYLIKDRLV 124

Query: 195 GSYKVKPVINMLKQTLVGTGVVLVSAVLLFIF 225
             Y V P+++ LK +       L+  +L FIF
Sbjct: 125 ADYTVLPILSRLKISFTINFSFLICLLLRFIF 155

[Close]

BLAST of Cp4.1LG05g11610 vs. NCBI nr
Match: XP_023534221.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023534222.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620 bits (1598), Expect = 1.16e-223
Identity = 312/318 (98.11%), Postives = 312/318 (98.11%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDLVK
Sbjct: 301 YYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. NCBI nr
Match: XP_022947583.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata] >KAG6605201.1 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 617 bits (1592), Expect = 9.50e-223
Identity = 311/318 (97.80%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIR RRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDLVK
Sbjct: 301 YYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. NCBI nr
Match: XP_023006930.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita maxima])

HSP 1 Score: 615 bits (1586), Expect = 7.81e-222
Identity = 310/318 (97.48%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIR RRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           T SSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TLSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDLVK
Sbjct: 301 YYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. NCBI nr
Match: XP_038900298.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida])

HSP 1 Score: 546 bits (1408), Expect = 8.39e-195
Identity = 277/318 (87.11%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           M RLNVYCSSCCSLI   +DVRT F F      + R NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MFRLNVYCSSCCSLIRNSKDVRTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS LYSWGELGAGPFFLRLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSVLYSWGELGAGPFFLRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTG+VLVSAVLLFIF+TPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGIVLVSAVLLFIFATPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
            FSS Q+ SSNVNPDS INKKYNLRK++LL+LPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 RFSSNQNLSSNVNPDSDINKKYNLRKEQLLQLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDL+K
Sbjct: 301 YYRALAGGQYCKWEDLIK 312

[Close]

BLAST of Cp4.1LG05g11610 vs. NCBI nr
Match: XP_022149445.1 (uncharacterized protein LOC111017873 [Momordica charantia])

HSP 1 Score: 545 bits (1403), Expect = 6.04e-194
Identity = 272/318 (85.53%), Postives = 289/318 (90.88%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YCS C  LI  GRDVR GFG+G S VIR R NRRL+  V AKALKDDQ+DG GG
Sbjct: 1   MLRLNLYCSGCGCLIRSGRDVRGGFGYGSSWVIRLRGNRRLSPGVSAKALKDDQRDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPG+ WDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG GPFFLRLGGLWL SFT+LG
Sbjct: 61  RFPGRSWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGTGPFFLRLGGLWLASFTLLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VP+AAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPIAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVI MLKQTLVGTG+VLVSAVLLFIFSTPVE F+QT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLVGTGIVLVSAVLLFIFSTPVEGFLQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFS++QS+ SNVN D  IN+KYNLRK+ELLRLPVEV+ADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSTRQSSPSNVNQDPNINRKYNLRKEELLRLPVEVLADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           +YRALAGGQYCKWEDL+K
Sbjct: 301 FYRALAGGQYCKWEDLIK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL
Match: A0A6J1G705 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451407 PE=4 SV=1)

HSP 1 Score: 617 bits (1592), Expect = 4.60e-223
Identity = 311/318 (97.80%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIR RRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDLVK
Sbjct: 301 YYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL
Match: A0A6J1L1J9 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499573 PE=4 SV=1)

HSP 1 Score: 615 bits (1586), Expect = 3.78e-222
Identity = 310/318 (97.48%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIR RRNRRLNRRVLAKALKDDQKDGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           T SSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TLSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDLVK
Sbjct: 301 YYRALAGGQYCKWEDLVK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL
Match: A0A6J1D5Q7 (uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017873 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 2.92e-194
Identity = 272/318 (85.53%), Postives = 289/318 (90.88%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YCS C  LI  GRDVR GFG+G S VIR R NRRL+  V AKALKDDQ+DG GG
Sbjct: 1   MLRLNLYCSGCGCLIRSGRDVRGGFGYGSSWVIRLRGNRRLSPGVSAKALKDDQRDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFPG+ WDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG GPFFLRLGGLWL SFT+LG
Sbjct: 61  RFPGRSWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGTGPFFLRLGGLWLASFTLLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           VP+AAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 VPIAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVI MLKQTLVGTG+VLVSAVLLFIFSTPVE F+QT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLVGTGIVLVSAVLLFIFSTPVEGFLQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFS++QS+ SNVN D  IN+KYNLRK+ELLRLPVEV+ADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSTRQSSPSNVNQDPNINRKYNLRKEELLRLPVEVLADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           +YRALAGGQYCKWEDL+K
Sbjct: 301 FYRALAGGQYCKWEDLIK 318

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL
Match: A0A5D3BLA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00680 PE=4 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 2.24e-192
Identity = 271/318 (85.22%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YC+SCCSLI   ++V T F F      + R NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTG+VLVS VLLFIF+TPVEDF+QT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGIVLVSGVLLFIFATPVEDFLQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFSS Q+ SS++NPDS INKKYNLRKD+LLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSSNQTLSSSINPDSNINKKYNLRKDQLLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDL+K
Sbjct: 301 YYRALAGGQYCKWEDLIK 312

[Close]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL
Match: A0A1S3C6Y4 (uncharacterized protein LOC103497381 OS=Cucumis melo OX=3656 GN=LOC103497381 PE=4 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 2.24e-192
Identity = 271/318 (85.22%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60
           MLRLN+YC+SCCSLI   ++V T F F      + R NRRLN RVLAKALKDDQ DG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLI------GWSYVGDRLLSAVIPYEESGWY 180
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLI      GWSYVGDRLLSAVIPYEESGWY
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWY 180

Query: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQT 240
           DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTG+VLVS VLLFIF+TPVEDF+QT
Sbjct: 181 DGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGIVLVSGVLLFIFATPVEDFLQT 240

Query: 241 TFSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300
           TFSS Q+ SS++NPDS INKKYNLRKD+LLRLPVEVMADDELAAAAAEAADGRPVYCRDR
Sbjct: 241 TFSSNQTLSSSINPDSNINKKYNLRKDQLLRLPVEVMADDELAAAAAEAADGRPVYCRDR 300

Query: 301 YYRALAGGQYCKWEDLVK 312
           YYRALAGGQYCKWEDL+K
Sbjct: 301 YYRALAGGQYCKWEDLIK 312

[Close]

BLAST of Cp4.1LG05g11610 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 405.2 bits (1040), Expect = 4.7e-113
Identity = 207/286 (72.38%), Postives = 235/286 (82.17%), Query Frame = 0


Query: 37  RNRRLNRRVLAKALKDDQKDGAGG-RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   F GQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLI--- 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLI   
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 ---GWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLV 216
              GWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVI MLKQTL+
Sbjct: 167 IYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLI 226

Query: 217 GTGVVLVSAVLLFIFSTPVEDFVQTTFSSKQSTSSNVNPDSIINK---KYNLRKDELLRL 276
           GTG +LVSA +LF+F+TPVEDF +TT  S ++      P+  I++   K+N+RK++LLRL
Sbjct: 227 GTGALLVSAFVLFVFATPVEDFFKTTLGSTEN-----QPEVSISRTSNKFNIRKEQLLRL 286

Query: 277 PVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 313
           PV+V+ DD+LAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
Sbjct: 287 PVDVVTDDDLAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK 327

[Close]

BLAST of Cp4.1LG05g11610 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-31
Identity = 78/162 (48.15%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 69  PGLEIEVPFEQRPVNEYSSLKDSALYSW--GELGAGPFFLRLGGLWLVSFTVLGVPVA-A 128
           P  +  VP EQ+P+NEY SL  S  +SW  G+L      L L G     F  +G+PV+  
Sbjct: 57  PETDCPVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFF--VGLPVSWF 116

Query: 129 ASFNPSREPLRFVLAAGIGTLLLVSL------IGWSYVGDRLLSAVIPYEESGWYDGQMW 188
            S  P  EP++ +LAA    + +V+L      +GW+YVG+RLLSA + YEE+GWYDGQ+W
Sbjct: 117 GSIGPEYEPVKRILAASSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVW 176

Query: 189 VKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLL 222
           VK PEVLARDRLLGS+ VKPV+  LK TLV  G+ L+  + L
Sbjct: 177 VKTPEVLARDRLLGSFSVKPVLARLKNTLVILGLSLILVINL 216

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g11610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	6.6e-112	72.38	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P51273	4.3e-26	40.38	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]
Q1XDL3	6.1e-25	40.38	Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1	[more]
P48276	2.9e-22	40.52	Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1	[more]
O78501	7.1e-13	33.55	Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1	[more]

BLAST of Cp4.1LG05g11610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534221.1	1.16e-223	98.11	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_022947583.1	9.50e-223	97.80	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_023006930.1	7.81e-222	97.48	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_038900298.1	8.39e-195	87.11	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa ...	[more]
XP_022149445.1	6.04e-194	85.53	uncharacterized protein LOC111017873 [Momordica charantia]	[more]

BLAST of Cp4.1LG05g11610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G705	4.60e-223	97.80	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1L1J9	3.78e-222	97.48	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1D5Q7	2.92e-194	85.53	uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5D3BLA1	2.24e-192	85.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C6Y4	2.24e-192	85.22	uncharacterized protein LOC103497381 OS=Cucumis melo OX=3656 GN=LOC103497381 PE=...	[more]

BLAST of Cp4.1LG05g11610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67370.1	4.7e-113	72.38	Protein of unknown function (DUF1230)	[more]
AT5G11840.1	1.6e-31	48.15	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 74..209 e-value: 1.6E-49 score: 167.7
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 1..312
None	No IPR available	PANTHER	PTHR34214:SF3	PROTEIN CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, CHLOROPLASTIC	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g11610.1	Cp4.1LG05g11610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990641	response to iron ion starvation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid