Cp4.1LG05g11560 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g11560
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CBS domain-containing protein CBSX1, chloroplastic-like
Location	Cp4.1LG05: 7843304 .. 7846699 (-)
RNA-Seq Expression	Cp4.1LG05g11560
Synteny	Cp4.1LG05g11560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGTCAAGCTAGATTCCTCACAGACGGTTAACCCCGTCACCCACAATTCTCAAAGCTCTCATCGCCGTCTGATCTACATCTTGGCTCTACCTGATTATAACACGTGGATCTAAACATTGACATCCAGTGCGGTGACAGCCGGTTAGGAATAAGCGGGTTTTACGTCACAGTAGATTATTATCTTCTTCCACAGTGCAAAAACTGCAAGCAAGAAAATAAAATCCCAGTCTCCTCGTTCGAACCTCACGAACTTCGGCGACTGTGGAGGGTTTGCTTTTTGTTGATTCGTTTCGGGACTGGTTTCGTGAAGGCTCTCTCATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATTTACGGGGCTCCGGAAATCTACTTCAGTCGCCGCTAATGGCACCTTGATGGCCAATTCTGTACCGGTGTGTGGTTCTGTTCTTAATTGTTTCTGTTGCTTTGTTTTTTTTTTCAAATACTCTTACGAATTTACCTAATGATTTTGAGGAATGTAGCTTAGTAGATTTTGATTAGATTTTTATGATTGAACTTCCTCCGTCATGGTGAAGAAAGCAAAAGATTGAACTAAATATTCACTATGAAAGAGCAATGCCAACTTGTAGAATAGAATCTTCTTTAAAGAAGAGATCAGATTTCATGGATGAATGAAATAAAGTCACATCACCCACGATTTTGTGCACTATAATTTCTAATAGCCTCATTAACAACGAGAAATTTGTCAAGAACTTGCTTTCCCTCCACAAAATCTCTCAGGTTATTGGACATGCTTAATGGAAAAAAGTGTTTCCATCTCCTTCTCTGATCCGCTCACTTAGAACTTTTTCTTGAACTAACCTTCTACAGTTTGACAAGAACACCAACGTTCTTCCATGAATTCTTTTAGCTCTACTGTGTTTCTGCTTACCTTGAGAACAGAAACATAAAATCTAAACAACTACAAGAAAAATTACTTTCTATTCTGGAAATTTTTGTATTGATTAATCCATCAATAGGGGCCTTCATAGAAAAGAAAAATTATCCTTTATTTTCTATGACATCTTGTGATCTTGGTGGAGAGGTAGAAGGGACAGGTCAACATCGCCTGGAATTGAAATTTATACTCACGAGCAGTGTTCTTCTGAGTAACTGTACTCTGAATTTGTTATCATCTTAGAAATTTATTCTTCTTTCCTTAATATTTTGATATGCAGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGGTAATTGGAATTTTTGGATATTTTCCCCCAACCCTGTGGAAAATGTGGCTTATTATCTCTGTTTATGAACAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTATCCATTTCCAGACTGCTACCTAAAATGTTTAGAATTTGTGTGAATTTAGCTCATCTGAATTTCTTTTTGAGCCCTTAGACTCCTGTATCTGTATTATCAATCAAGTATATGTTTGATTTAAATGGCTTAATGTATCGATGCTCATAATAGAAGTACTTCTTGATGCAGGTTGGCGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTATATCAGAACTTTCTTGTTATTGCTGATACAACTAACATTGTTTATCCCGTTTGAGAAAGATTGTTCAGCTGTCTTATCTTTGAGTGTTTGGCTATTTGTACCATCTCTTGCTATGATATGTTTTCAGGCGAATTACAGACAGCACTAATGAAGAGAGAATCTAGCTTCTTGGATGTATTAATTTTTTTCCCAAATTTTTCTTTATGTTGAAAGATGCATCATATCATTTGTTACTCATGAATTATGTTAGTCATTACTTTAACCTGAGAATATTTTTGCATAAGGTCAAGTATTTTAGATTGACAAGATTTCCGAATGTTCTAATTAGGTGGTGGAACGACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAGTATGCATTGACCTCCTTTTTTGGCGTTTAATTGTAGTTGTTTGCTTCATACTCTTTACTATCATTGCTCCCGATGACTTTATGTATTCAATTATTTCGTCCGAGTCTTAAAAGAAGTAGATAATATAACTTTGTGAGAAGTAGAAGGTAAGAGTCACTGTTCTAATCTACCATGTAAATAATAAAGAGCATAGACGGAATTGGTTCAAGTCATGGTGACCACCTACCTAGAATTTAATATCCTACGAGTTAGAGAATAGTCTAGGTGTGTGCAAGCTGGTCAAAGACACTCACGGATTAAAAAAGATCACTGTTTTGTTTTCGAATAGTCTAGGTGTGTGAATTCGAGTTATGGTTGATCTATTATTTCAACTCCTTCATATGGTACTAGTTTGTAGAGGACATGAAATGAAAATCTTCTGCACAAATGATTTCTCTAATTCTAAATCATCATCCTTGTAGACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTCGTTAGAGAAAATAGTGATCTTGAGGACGCTGCAAGGTTCAAACATGCTTTTTTCCTTTTTCTTTATAGTATCATATCATTTCCTTAACTTCTTCGCTTTGAACCATTTCTATTTTCTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTAAGACATATCCATCTCTTCCAACCCTCTCATATGAATTATTGGTTGTTTTTGCCATCAAAATGATGAAACCTTTCATGAAGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGATTTTCCTATACTCAGAATCAAAGTCAATCTGCATGCTGTTAGGTATGAGGATTCTGAAATGCAATCATACAATTTTGGGTCATGATTGTATTAATATACACAACACTTTGTATAAATGGATATGATCTTGTTTTAACCATAAAACTAATAAAAACTGTGTTCTTATCAAAATATACAAATTTGTGACACCTTTCACAAGTCGCAGAGATTTTGTTGATAAATGTATTTTAGTTTCAAACAAATGTTTTCTTTTGACAATTTTTAGTTGTCAACCAGACAGTTTGAAATATCAAAACAAGAACAAGGACTATTCATGAGTTGGTACCTTTTAAATGTCGATATAGTTGCCGATAGA

mRNA sequence

CATGTCAAGCTAGATTCCTCACAGACGGTTAACCCCGTCACCCACAATTCTCAAAGCTCTCATCGCCGTCTGATCTACATCTTGGCTCTACCTGATTATAACACGTGGATCTAAACATTGACATCCAGTGCGGTGACAGCCGGTTAGGAATAAGCGGGTTTTACGTCACAGTAGATTATTATCTTCTTCCACAGTGCAAAAACTGCAAGCAAGAAAATAAAATCCCAGTCTCCTCGTTCGAACCTCACGAACTTCGGCGACTGTGGAGGGTTTGCTTTTTGTTGATTCGTTTCGGGACTGGTTTCGTGAAGGCTCTCTCATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATTTACGGGGCTCCGGAAATCTACTTCAGTCGCCGCTAATGGCACCTTGATGGCCAATTCTGTACCGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGCGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTGGTGGAACGACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTCGTTAGAGAAAATAGTGATCTTGAGGACGCTGCAAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGATTTTCCTATACTCAGAATCAAAGTCAATCTGCATGCTGTTAGGTATGAGGATTCTGAAATGCAATCATACAATTTTGGGTCATGATTGTATTAATATACACAACACTTTGTATAAATGGATATGATCTTGTTTTAACCATAAAACTAATAAAAACTGTGTTCTTATCAAAATATACAAATTTGTGACACCTTTCACAAGTCGCAGAGATTTTGTTGATAAATGTATTTTAGTTTCAAACAAATGTTTTCTTTTGACAATTTTTAGTTGTCAACCAGACAGTTTGAAATATCAAAACAAGAACAAGGACTATTCATGAGTTGGTACCTTTTAAATGTCGATATAGTTGCCGATAGA

Coding sequence (CDS)

ATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATTTACGGGGCTCCGGAAATCTACTTCAGTCGCCGCTAATGGCACCTTGATGGCCAATTCTGTACCGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGCGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTGGTGGAACGACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTCGTTAGAGAAAATAGTGATCTTGAGGACGCTGCAAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGA

Protein sequence

MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKSTSVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENRT

Homology

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BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-76
Identity = 154/226 (68.14%), Postives = 176/226 (77.88%), Query Frame = 0


Query: 11  LSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKSTSVAANGTLMA 70
           LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRI----PSASSAAGSTLMT 69

Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE RITGFPVID++WKLVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG G T+ SMFPEVDSTWKTFN VQ LLSKTNGK+VGDLMTP PLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRA 237
           ++LEDAA++LL+TKYRRLPVVD+DGKLVGIITRGNVVRAALQIKR+
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

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BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.5e-71
Identity = 131/171 (76.61%), Postives = 154/171 (90.06%), Query Frame = 0


Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NSVP+ NG YTVGDFMT ++ LHVVKP+T+V++ALE+LVEK++TG PVIDDNW LVGVVS
Sbjct: 68  NSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG    D ++FP+VDSTWKTFNE+Q L+SKT GKVVGDLMTP PLVVR++
Sbjct: 128 DYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDS 187

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENRT 242
           ++LEDAARLLL+TK+RRLPVVDADGKL+GI+TRGNVVRAALQIKR  EN T
Sbjct: 188 TNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETENST 238

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BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.4e-10
Identity = 39/145 (26.90%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 94  VVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPE 153
           VV     + + + +  + +I+G PV++ + KLVG++S+ D+  + +I         + P 
Sbjct: 26  VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDI--VKTIVTHNEDLNLILPS 85

Query: 154 ----VDSTWKTFNEVQSLLSKTNGKV---VGDLMTPVPLVVRENSDLEDAARLLLQTKYR 213
               ++   KT  +++  +      +   V D+MT   +V + +  + DAA+L+++   +
Sbjct: 86  PLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIK 145

Query: 214 RLPVVDADGKLVGIITRGNVVRAAL 232
           RLPVVD +G L+GI+TRG+++ A +
Sbjct: 146 RLPVVDDEGNLIGIVTRGDLIEALI 168

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BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot
Match: Q9UY49 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=guaB PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 40/138 (28.99%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 90  EELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGS 149
           E++  + P  TV+ AL ++ +  I G PV+ +N K+VG++S  D+ A +           
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVV-ENEKVVGIISKKDIAARE----------- 160

Query: 150 MFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLP 209
                                  GK+V +LMT   + V EN ++E+A +++++ +  RLP
Sbjct: 161 -----------------------GKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLP 203

Query: 210 VVDADGKLVGIITRGNVV 228
           VVD +G+L+G+IT  ++V
Sbjct: 221 VVDKEGRLIGLITMSDLV 203

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09
Identity = 40/138 (28.99%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 90  EELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGS 149
           E++  + P  TV+ AL ++ +  I G PV++D  K+VG+++  D+ A +           
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 160

Query: 150 MFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLP 209
                                  GK+V +LMT   + V E+ ++E+A +++++ +  RLP
Sbjct: 161 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 203

Query: 210 VVDADGKLVGIITRGNVV 228
           VVD  GKLVG+IT  ++V
Sbjct: 221 VVDERGKLVGLITMSDLV 203

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BLAST of Cp4.1LG05g11560 vs. NCBI nr
Match: XP_023532068.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466 bits (1198), Expect = 3.62e-165
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. NCBI nr
Match: XP_023007339.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 461 bits (1186), Expect = 2.45e-163
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRATSFSVQELLF PCRRPSSPIVHASV+RSFSTSCRFTGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRATSFSVQELLFEPCRRPSSPIVHASVSRSFSTSCRFTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SIAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. NCBI nr
Match: XP_022948196.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 460 bits (1184), Expect = 4.93e-163
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCR TGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. NCBI nr
Match: KAG6605214.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458 bits (1179), Expect = 2.85e-162
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRA SFSVQELLFGPCRRPSSPIVHASVARSFSTSCR TGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRANSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. NCBI nr
Match: XP_038895655.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 399 bits (1026), Expect = 4.78e-139
Identity = 212/241 (87.97%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRA SFSVQELLFG  RRP SPI+HASVA+SF        LR+ST
Sbjct: 1   MESIGCSLSSLSLAQFRAKSFSVQELLFGSYRRPPSPILHASVAQSFPE------LRRST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AANGTLMANSVPS +GVYTVGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SLAANGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 235

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL
Match: A0A6J1L4N7 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499864 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.18e-163
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRATSFSVQELLF PCRRPSSPIVHASV+RSFSTSCRFTGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRATSFSVQELLFEPCRRPSSPIVHASVSRSFSTSCRFTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SIAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL
Match: A0A6J1G8L0 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451845 PE=4 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 2.39e-163
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCR TGLRKST
Sbjct: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AA+GTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR
Sbjct: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL
Match: A0A0A0LSY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G152500 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.90e-138
Identity = 209/240 (87.08%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCSLSSLSLA FRA SFSVQE+LFGPCRRPS PI+HASVA+SF        LRKST
Sbjct: 1   MESIGCSLSSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFPE------LRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AA+GTLMANSVPS  GVY VGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIK AEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL
Match: A0A6J1J6R2 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483973 PE=4 SV=1)

HSP 1 Score: 391 bits (1004), Expect = 5.99e-136
Identity = 200/239 (83.68%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESIGCS +SLSLAQFRA SFS+QELLFGP RRP SPIVHASV++SF  S RF   RKST
Sbjct: 1   MESIGCSFTSLSLAQFRANSFSIQELLFGPRRRPPSPIVHASVSQSFPASSRFPEQRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S++A+GTLMANS PS +GVYTVGDFMTR+EELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SLSASGTLMANSAPSRSGVYTVGDFMTRREELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNW LVGVVSDYDLLALDSISGGG TD SMFPEV+S+WKTFNEVQ LLSKTNGKV+GDLM
Sbjct: 121 DNWNLVGVVSDYDLLALDSISGGGRTDPSMFPEVESSWKTFNEVQRLLSKTNGKVIGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEEN 239
           TP PLVVRE ++LEDAARLLL+TKYRRLPVVDA GKLVGIITRGNVVRAALQ+K A+EN
Sbjct: 181 TPAPLVVRETTNLEDAARLLLKTKYRRLPVVDAKGKLVGIITRGNVVRAALQMKHAQEN 239

[Close]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL
Match: A0A1S3CFF0 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500318 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 2.11e-135
Identity = 207/240 (86.25%), Postives = 216/240 (90.00%), Query Frame = 0


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKST 60
           MESI CSLSSLSLA  RA SFSVQE+LFGPCRR S PI+HASVA+SF        LRKST
Sbjct: 1   MESIVCSLSSLSLAHLRAKSFSVQEMLFGPCRRLSLPILHASVAQSFPE------LRKST 60

Query: 61  SVAANGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AA+GTLMANSVPS  GVYTVGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SLAASGTLMANSVPSGTGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIK AEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of Cp4.1LG05g11560 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 154/226 (68.14%), Postives = 176/226 (77.88%), Query Frame = 0


Query: 11  LSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRFTGLRKSTSVAANGTLMA 70
           LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRI----PSASSAAGSTLMT 69

Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE RITGFPVID++WKLVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG G T+ SMFPEVDSTWKTFN VQ LLSKTNGK+VGDLMTP PLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRA 237
           ++LEDAA++LL+TKYRRLPVVD+DGKLVGIITRGNVVRAALQIKR+
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

[Close]

BLAST of Cp4.1LG05g11560 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 268.5 bits (685), Expect = 5.3e-72
Identity = 131/171 (76.61%), Postives = 154/171 (90.06%), Query Frame = 0


Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NSVP+ NG YTVGDFMT ++ LHVVKP+T+V++ALE+LVEK++TG PVIDDNW LVGVVS
Sbjct: 68  NSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG    D ++FP+VDSTWKTFNE+Q L+SKT GKVVGDLMTP PLVVR++
Sbjct: 128 DYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDS 187

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENRT 242
           ++LEDAARLLL+TK+RRLPVVDADGKL+GI+TRGNVVRAALQIKR  EN T
Sbjct: 188 TNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETENST 238

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g11560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23193	2.0e-76	68.14	CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9C5D0	7.5e-71	76.61	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q58821	7.4e-10	26.90	Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]
Q9UY49	1.3e-09	28.99	Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)...	[more]
O58045	4.8e-09	28.99	Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700...	[more]

BLAST of Cp4.1LG05g11560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532068.1	3.62e-165	100.00	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. p...	[more]
XP_023007339.1	2.45e-163	98.76	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022948196.1	4.93e-163	98.76	CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6605214.1	2.85e-162	98.34	CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_038895655.1	4.78e-139	87.97	CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG05g11560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4N7	1.18e-163	98.76	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1G8L0	2.39e-163	98.76	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX...	[more]
A0A0A0LSY7	1.90e-138	87.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G152500 PE=4 SV=1	[more]
A0A6J1J6R2	5.99e-136	83.68	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3CFF0	2.11e-135	86.25	CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 ...	[more]

BLAST of Cp4.1LG05g11560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36910.1	1.4e-77	68.14	Cystathionine beta-synthase (CBS) family protein	[more]
AT4G34120.1	5.3e-72	76.61	Cystathionine beta-synthase (CBS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 183..231 e-value: 2.6E-12 score: 56.9 coord: 91..139 e-value: 1.6E-8 score: 44.3
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 176..229 e-value: 3.4E-15 score: 56.2 coord: 82..136 e-value: 7.8E-15 score: 55.1
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 180..237 score: 14.767837
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 86..146 score: 13.474571
None	No IPR available	GENE3D	3.10.580.10		coord: 77..237 e-value: 3.1E-70 score: 236.9
None	No IPR available	PANTHER	PTHR48108	CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC	coord: 30..238
None	No IPR available	PANTHER	PTHR48108:SF9	CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1	coord: 30..238
None	No IPR available	CDD	cd17789	CBS_pair_plant_CBSX	coord: 89..229 e-value: 5.34307E-85 score: 247.384
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 79..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g11560.1	Cp4.1LG05g11560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast