Cp4.1LG05g10930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g10930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionShikimate kinase
LocationCp4.1LG05: 7202913 .. 7206999 (-)
RNA-Seq ExpressionCp4.1LG05g10930
SyntenyCp4.1LG05g10930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGCCACCCAGTCGTTCTGAACCAGAGGAGTGTCGTCACAGATATCCGACGTCGACCATCTTCTCTGCGTTCAACCTGTTCAAATCATTGTTTCAACTTCGGTACGTTCATTTCACCGCTATAATCCGAAGTTTTAAAAAATGAACTCAGTTTATTTGTTTTTGTGTGCGTGTGTTTGTTTTTCCGTTTGATTTCGTTTTCTGAGTTGTTTCTTTCGGTTTTTGAATTTGTTTCATCTTACGAACTGCTTTCTGCGATTTCTGTAGGAAATAGTTATTGTTTGTTTTACGCCACTTTTTTTGGTTGTGGTTTTGTTTTGGAGATGAATGGATTGAGAATCTAACCTGACTTCCTCCGGCCTTGCAGCGACTCTATTCTTGTATCATTTTCCAACTGCTACTCATTGTTGTTGTAATTTGGTAAAATCGACCTCTCATGTCAACAAGAATGGAGGCCACGGTTACGCAGCACTTCCAGTTTTCTCCATGGATCCATTCCAGCAGTATTGTTGCAAAGCCCAAGGGTTCGCTACAATTTTCTCGGCGATTCGCGGAGCAGCACATCTTGCGGGTGCCATTTTCATTCAATTTACAATTGTCGAGACCTTCAGCTCGTCGCAGAACAGTTGCTTTGAACATTGCCTGCTCTTACGAGAACTCGACAGGTTTTCTGTTTGCAATCTATAGCCGATATATTCAATTTTCTCATCTTAAAGCTAAAGAAACGTCTATCTGTTAATTCGATGGTATTCTATAGAATTCGGTAAAAGCCAATTATAGCTTAGCTCCTAGAATTTTGATTAGCATTTACTTGGTATATATATATATATATGCGTATGGAATCTCCCAAAACACATGAAGTTCCTCATCTTTACCCGTGATAAAATTAATGTTTCTCCGATTGTTAAAATTTGCACGGTGTACTTGAGAAACTTGGAGCACCTTTATTAAGTGTGTTATAAAATGACAATTTCATTTCAACTTGATTACATTTTTCCCATTTGCTCCCACTGTGAAGTATTTTTTACACAATGTTTTAAGCTCTCATTAGAAGGATTAGCCTGTAATTTGTGGCATACATACATACATACATATACATGGAAACTTGAATATAGTCAGGGACTACATTTCTAATAAGATTTTCGATTTTGCGTTTTTTCAGTGTTGGAATCTGGAAACCATTTTGCTTCTTTTGATGAATCTTTGGCTATACAGGTATGGGTTTCCTCTTTTTCATTCTTATTTTGCTAGAGGTTTTCACTGCTTTCTTGCATTGTGTGATTGAGTCATATTCAAAATTGCAGAGGAAGTGCCGGGAGATTGAGTCATATTTAGATGGGCGCTGTATATATCTTGTTGGTGAGTTTCTTTCTTGGAGCACTTCATTACTTTTGAGCTTATGAAATTAGATGTTCAAAATTGTATCTATGAAGTGCAGGAATGATGGGTTCGGGAAAAACGACTGTGGGGAATGTCCTGTCCAATGCACTCGGTTACTCCTTTGCTGATAGGTTTGTCTTAAAGCTGTTTGTGCAGTTTTTACCAACTTTCTATCAAAATCTGTTATTCTTCTTTGCATCTTGATTTCATAGCAAGCGAGAGATTTACGTTCTTTAAATTTTATAATTAAATTTATCTTCCAAGTTTTATTGACAAGTGAAGCTGAGTAAAATGCAGCTGTAAAATTACAATATCATTGAAGATGCAACAGATGCAGAAAAATCACTGGACCCTGTTTTTAATTTTATTTCCTCCATTAATGAAAGAAAGAACTGTGGATCTAGGATTTTTATGCTAGCGTTATAATTTCTGGCTTCTGTGATTAATTTTTCTTGTCCATGCGTAACCACATACTATGACGATATATTTCCTTACTGATCACTTGTGATATTTTATATTTTGGATGCCACAGTGATTCATTGGTTGAAGAAGACGTTGGAATTTCTGTAGCTGAAATTTTCAATGTCTATGGGGAAGACTTCTTTAGAGAAAAAGAGGTCAGTATAGACGCATAACTGCCAAATCATTTGTTACATTTTGACATAATTTATGTTGTCTGTTAACTACTTTGCTCAAAGTTTATGCTGTTTATTCATTATTTTACCTCTCTCTGCCTCTCTCTCAAATGCACCCATCGATTATCTTGTAAAGGTTTTTAGCTGTTAGGTTCATATCCAAACATGGATTCTGATCGAGATTTTCTTTCTCTCTTGACTGATGAGGTTATCTCAATTGTTTGTCCCGTGGTACACTTGGATTTGTACTTCAGACTACTTTTGAAGTGTTATGTAGTATCTAGAATTGATGAAAGTGATCTTAATCATTCAAGAATTTCTTTTTAGTCCTTGCTTAAACTAAACCTCATACTAGCCTCGAAGGTCGAAGTAAATATCATGGCCATAATGCTCTATGATAACTATCATTACTTTGTTTTCTATTCTTTCATTTTAAAGTTATACCACGAAAAGGTCATTGCCACTTGGCCATTACATTTTGATAGACCCGGAATGTGTAATACTTGAATTTCTCACCATTGAAACATTGTTGCCACAAGGGATGCTCTATTCTATGCATTTATGAACTCCAAAACAAAATCTTAGCTTATTGACATAACAGTGAATCTAACTTATCTTGATTCCTGCAGACGGAGGCATTGAGGAAGTTATCTTTGATGCATCAGTTTGTTATTTCCACAGGCGGAGGTGTCGTTACAAGAACGATAAACTGGTAAAGAAGAGAGACTAGTTAGATACAAGTGGTTACATCTTTTCAGTTGTACTTAAGTTTTCAGTATCATCTGGCCGAACCTTTGTTCTTAAATTTCCAGGAAACATATGAATAAAGGGATCAGTGTCTGGTTGGATGTGCCTTTGGAAGCCTTGGTTAAGAGGATTTCAGCTGTAGGAACCCGTTCTCGCCCCCTTTTGCATCATGATTCAACTGATGCATACTCAAAAGTACGTTTTTCAGTGCTTGTTTCTGTTTTCTCTTGAGAAGAATCTCTTAAGATTAGTTTTAAAATTCAGTCTCGAATAAATTTGTTATTTAATTCCTGTCATCTACAGACCGTCGTCCGTTTATCTACTCTCCTAGAAGAGAGGGGTGAAGCATATGCCAAAGCTGAAGTGAGAGTTTGCTGCCAAAGTAAGACATCTTTCCTTGATGTTTTTATTCATCATGACCTGTGGAAGTACAAAAAAGAACTAAAATAATGTCTTATTCTTTCTAAGCTTAATGTCAACAGCTCAATGGTTTTGGGTTTGCAATATCAAAAAGTAATCTCTTTAGTTTTTCTTTCGCACAGAAGAACTGCTGCTTTCATTTAAAAGTTATTTTTTCCAAAAGCCATTCCGAACATAAGCTGAGTGCTTGAGTTGTGCAGAACTTGCAGCGAAACTGGGCACTAAAGATGTATGTAATGTCACACCTATGGCCATAGCAATCGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATAAACATTATAGTTTACGCTGCAACTAACTCGAGCATTTTGACTATGAGTCCTATTTTTATTCCTAACAATTTTTAGCTTGTACACGTTTATACTACTATGTACTCTCAGGTACTGGAACAAATCAGCATCTTTTTGGAGAGAGAAAATGGTTCTTGTGCATTTTGACAACCACAAAAACAATAGTTATTCAGGTATAATAGAAGCTTTACTACTTTCATGGCAGCAATGAAGTGAAGAAGCTGATATTTTCGTTTCATTTTTTCCTTATAAAAGTTGAGCATTTTTCTTCTGTTTTCAGGTGCAATTACAAATTCGATTTTTTCATTATTTATGGAGAATATTCTCTATCAAAGCTTGATTCATCCCAAGTCTTGACCCATATTTCTTAATCTCGCAAAAGGGTATGATCATTTAGTGTAGTGAAGCATAGAAAATGTATCACGTTTCTTATAAATGTGGTTATGTCATTCATTTAAGGTTAGATTACACTTCGGTTGGCTCTATTGTACGGAGAAGTTTCATATTTAATTTTAAAATTTTCCCAAAGGTACAAAATTGTATCTATTCTTTGTCAATTTCTGTATGGATTTCTATT

mRNA sequence

TGAGCCACCCAGTCGTTCTGAACCAGAGGAGTGTCGTCACAGATATCCGACGTCGACCATCTTCTCTGCGTTCAACCTGTTCAAATCATTGTTTCAACTTCGCGACTCTATTCTTGTATCATTTTCCAACTGCTACTCATTGTTGTTGTAATTTGGTAAAATCGACCTCTCATGTCAACAAGAATGGAGGCCACGGTTACGCAGCACTTCCAGTTTTCTCCATGGATCCATTCCAGCAGTATTGTTGCAAAGCCCAAGGGTTCGCTACAATTTTCTCGGCGATTCGCGGAGCAGCACATCTTGCGGGTGCCATTTTCATTCAATTTACAATTGTCGAGACCTTCAGCTCGTCGCAGAACAGTTGCTTTGAACATTGCCTGCTCTTACGAGAACTCGACAGTGTTGGAATCTGGAAACCATTTTGCTTCTTTTGATGAATCTTTGGCTATACAGAGGAAGTGCCGGGAGATTGAGTCATATTTAGATGGGCGCTGTATATATCTTGTTGGAATGATGGGTTCGGGAAAAACGACTGTGGGGAATGTCCTGTCCAATGCACTCGGTTACTCCTTTGCTGATAGTGATTCATTGGTTGAAGAAGACGTTGGAATTTCTGTAGCTGAAATTTTCAATGTCTATGGGGAAGACTTCTTTAGAGAAAAAGAGACGGAGGCATTGAGGAAGTTATCTTTGATGCATCAGTTTGTTATTTCCACAGGCGGAGGTGTCGTTACAAGAACGATAAACTGGAAACATATGAATAAAGGGATCAGTGTCTGGTTGGATGTGCCTTTGGAAGCCTTGGTTAAGAGGATTTCAGCTGTAGGAACCCGTTCTCGCCCCCTTTTGCATCATGATTCAACTGATGCATACTCAAAAACCGTCGTCCGTTTATCTACTCTCCTAGAAGAGAGGGGTGAAGCATATGCCAAAGCTGAAGTGAGAGTTTGCTGCCAAAAACTTGCAGCGAAACTGGGCACTAAAGATGTATGTAATGTCACACCTATGGCCATAGCAATCGAGGTACTGGAACAAATCAGCATCTTTTTGGAGAGAGAAAATGGTTCTTGTGCATTTTGACAACCACAAAAACAATAGTTATTCAGGTGCAATTACAAATTCGATTTTTTCATTATTTATGGAGAATATTCTCTATCAAAGCTTGATTCATCCCAAGTCTTGACCCATATTTCTTAATCTCGCAAAAGGGTATGATCATTTAGTGTAGTGAAGCATAGAAAATGTATCACGTTTCTTATAAATGTGGTTATGTCATTCATTTAAGGTTAGATTACACTTCGGTTGGCTCTATTGTACGGAGAAGTTTCATATTTAATTTTAAAATTTTCCCAAAGGTACAAAATTGTATCTATTCTTTGTCAATTTCTGTATGGATTTCTATT

Coding sequence (CDS)

ATGTCAACAAGAATGGAGGCCACGGTTACGCAGCACTTCCAGTTTTCTCCATGGATCCATTCCAGCAGTATTGTTGCAAAGCCCAAGGGTTCGCTACAATTTTCTCGGCGATTCGCGGAGCAGCACATCTTGCGGGTGCCATTTTCATTCAATTTACAATTGTCGAGACCTTCAGCTCGTCGCAGAACAGTTGCTTTGAACATTGCCTGCTCTTACGAGAACTCGACAGTGTTGGAATCTGGAAACCATTTTGCTTCTTTTGATGAATCTTTGGCTATACAGAGGAAGTGCCGGGAGATTGAGTCATATTTAGATGGGCGCTGTATATATCTTGTTGGAATGATGGGTTCGGGAAAAACGACTGTGGGGAATGTCCTGTCCAATGCACTCGGTTACTCCTTTGCTGATAGTGATTCATTGGTTGAAGAAGACGTTGGAATTTCTGTAGCTGAAATTTTCAATGTCTATGGGGAAGACTTCTTTAGAGAAAAAGAGACGGAGGCATTGAGGAAGTTATCTTTGATGCATCAGTTTGTTATTTCCACAGGCGGAGGTGTCGTTACAAGAACGATAAACTGGAAACATATGAATAAAGGGATCAGTGTCTGGTTGGATGTGCCTTTGGAAGCCTTGGTTAAGAGGATTTCAGCTGTAGGAACCCGTTCTCGCCCCCTTTTGCATCATGATTCAACTGATGCATACTCAAAAACCGTCGTCCGTTTATCTACTCTCCTAGAAGAGAGGGGTGAAGCATATGCCAAAGCTGAAGTGAGAGTTTGCTGCCAAAAACTTGCAGCGAAACTGGGCACTAAAGATGTATGTAATGTCACACCTATGGCCATAGCAATCGAGGTACTGGAACAAATCAGCATCTTTTTGGAGAGAGAAAATGGTTCTTGTGCATTTTGA

Protein sequence

MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF
Homology
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BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match: Q00497 (Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.3e-83
Identity = 164/295 (55.59%), Postives = 207/295 (70.17%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTV 64
           MEA V+Q  Q S WI+S  +V KP G L+FS ++ E+   RV  S +LQ  + +   R V
Sbjct: 1   MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 65  ALNIACSYEN--STVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTV 124
            L ++CS +N  ++VLESG   AS DE   ++ K  E+E YLDGRC+YLVGMMG GKTTV
Sbjct: 61  QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 125 GNVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVIS 184
           G +L+  LGYSF D D L+E+ V GI+VAEIF + GE FFR+ ETE L KLSLMH+ V+S
Sbjct: 121 GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVS 180

Query: 185 TGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRL 244
           TGGG V R INW+HM+KGISVWLDVPLEAL KRI+  GT+SRPLLH +S D Y  T+ RL
Sbjct: 181 TGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRL 240

Query: 245 STLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
           +TL+E RGE YA A  RV  + +A K   KDVC++TP  I +EVL QI  FL+ +
Sbjct: 241 TTLMETRGENYANASARVSLENIALK-REKDVCHITPAEITLEVLIQIENFLKTQ 294

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match: Q9SJ05 (Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV=2)

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-75
Identity = 152/294 (51.70%), Postives = 201/294 (68.37%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKP-KGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA +TQ  Q+  W+    +  KP +GSL++S++       R      LQ  R + +RR 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 65  VALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVG 124
           V+  ++CS  NS+ L        FDE + ++RK  E++ YL+GR +YLVGMMGSGKTTVG
Sbjct: 61  VSPAVSCSDNNSSALLETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVG 120

Query: 125 NVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVIST 184
            ++S  LGY+F D D+L+E+ + G SVAEIF  +GE+FFR KET+AL+KLS  +Q V+ST
Sbjct: 121 KLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVST 180

Query: 185 GGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLS 244
           GGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH +S DAYS    RLS
Sbjct: 181 GGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLS 240

Query: 245 TLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
            + +ERGEAY  A  RV  + +AAK G K+V ++TP  IAIE  EQ+  FLE+E
Sbjct: 241 AIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match: Q8GY88 (Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK2 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-72
Identity = 150/300 (50.00%), Postives = 201/300 (67.00%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQF-SRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA   Q FQ+S W    +   KP+GSL++ ++R  E    RV       ++    +RR 
Sbjct: 1   MEAATVQRFQYSSWNDLRNFEGKPRGSLRYNTQRIKEDKRFRV-------VALTLDKRRD 60

Query: 65  VALNIACSYENSTVLESGN--HFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTT 124
             L       +S +LE+G+  H    +E   +++K  E++ YL+GR +YLVGMMGSGKTT
Sbjct: 61  HRLRSVSDKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTT 120

Query: 125 VGNVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLM-HQFV 184
           VG +++ +LGY+F D D+L+E+ + G SVAEIF  +GE  FREKETEAL+KLSLM HQ V
Sbjct: 121 VGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVV 180

Query: 185 ISTGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHD-STDAYSKTV 244
           +STGGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH D S D Y+  +
Sbjct: 181 VSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAAL 240

Query: 245 VRLSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENG 299
            RLST+ + RGEAY KA  RV  + +  KLG + V ++TP  IAIE  EQ+  +LE+E+G
Sbjct: 241 NRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDG 293

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match: Q7X7H9 (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK3 PE=1 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-61
Identity = 129/256 (50.39%), Postives = 176/256 (68.75%), Query Frame = 0 

Query: 45  RVPFSFNLQ-----LSRPSARRRTVA-LNIACSYENSTVLESGNHFASFDESLAIQRKCR 104
           RVP  F ++     L   S RR   A L ++CS + + + ++   + S DE+L +++K  
Sbjct: 27  RVPVRFAVEKFAQPLVLGSDRRSCGAKLKVSCSRKPAGIDKT---YYSADEALVLKQKAE 86

Query: 105 EIESYLDGRCIYLVGMMGSGKTTVGNVLSNALGYSFADSDSLVEEDVGI-SVAEIFNVYG 164
           ++  YL+ RCIYLVGMMGSGKTTVG +L+  LGYSF DSD LVE+ VGI SVAEIF ++ 
Sbjct: 87  DVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHS 146

Query: 165 EDFFREKETEALRKLSLMHQFVISTGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISA 224
           E FFR+ E+E LR LS MH+ V++TGGG V R INW +M KG ++WLDVPL+AL +RI+A
Sbjct: 147 EAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAA 206

Query: 225 VGTRSRPLLHHDSTDAYSKTVVRLSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVT 284
           VGT SRPLLH +S D Y+K   +L+ L E+R ++YA A+ RV  + +A K G  +V  +T
Sbjct: 207 VGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLT 266

Query: 285 PMAIAIEVLEQISIFL 294
           P AIAIE L ++  FL
Sbjct: 267 PSAIAIEALLKMESFL 279

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match: Q5NTH4 (Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-60
Identity = 121/218 (55.50%), Postives = 156/218 (71.56%), Query Frame = 0 

Query: 80  SGNH---FASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGNVLSNALGYSFAD 139
           SG H     S DE+L ++RK  E+  YL+GRCIYLVGMMGSGK+TVG ++S  LGYSF D
Sbjct: 67  SGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFD 126

Query: 140 SDSLVEEDVGI-SVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGGGVVTRTINWKH 199
           SD LVE+ VG+ SVA+IF V+ E FFR+ E+  LR LS M + V++TGGG V R +NWK+
Sbjct: 127 SDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKY 186

Query: 200 MNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTLLEERGEAYAKA 259
           M KG+SVWLDVPL+AL +RI+ VGT SRPLL   S D Y+    +LS L E+RG+AYA A
Sbjct: 187 MKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRGDAYANA 246

Query: 260 EVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFL 294
           +VRV  +++A+K G  DV  +TP  IAIE   +I  F+
Sbjct: 247 DVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIENFV 284

[Close]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match: XP_023533300.1 (shikimate kinase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596 bits (1537), Expect = 8.46e-215
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR
Sbjct: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match: KAG7035252.1 (Shikimate kinase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588 bits (1515), Expect = 1.91e-211
Identity = 299/302 (99.01%), Postives = 299/302 (99.01%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPS R
Sbjct: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSDR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRV CQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVSCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match: XP_022947888.1 (shikimate kinase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 586 bits (1511), Expect = 7.78e-211
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHF FSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR
Sbjct: 1   MSTRMEATVTQHFHFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYL+GRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLNGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRV CQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVSCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match: KAG6605292.1 (Shikimate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580 bits (1496), Expect = 1.30e-208
Identity = 295/298 (98.99%), Postives = 295/298 (98.99%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTV 64
           MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPS RRRTV
Sbjct: 1   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSDRRRTV 60

Query: 65  ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN 124
           ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN
Sbjct: 61  ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN 120

Query: 125 VLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGG 184
           VLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVISTGG
Sbjct: 121 VLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVISTGG 180

Query: 185 GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL 244
           GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL
Sbjct: 181 GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL 240

Query: 245 LEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF 302
           LEERGEAYAKAEVRV CQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF
Sbjct: 241 LEERGEAYAKAEVRVSCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF 298

[Close]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match: XP_023006843.1 (shikimate kinase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 577 bits (1486), Expect = 5.03e-207
Identity = 291/302 (96.36%), Postives = 297/302 (98.34%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHF FSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR
Sbjct: 1   MSTRMEATVTQHFHFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSY+NST LESGNHFASFDESLAIQRKCREIESYL+GRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYDNSTALESGNHFASFDESLAIQRKCREIESYLNGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGT SRPLLHHDSTDAYSKTV+R
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTSSRPLLHHDSTDAYSKTVIR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRV C+KLAAKLGTK+VCNVTPMAIAIEV+EQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVSCRKLAAKLGTKEVCNVTPMAIAIEVVEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match: A0A6J1G7V0 (Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111451641 PE=3 SV=1)

HSP 1 Score: 586 bits (1511), Expect = 3.77e-211
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHF FSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR
Sbjct: 1   MSTRMEATVTQHFHFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYL+GRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLNGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRV CQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVSCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match: A0A6J1L626 (Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111499514 PE=3 SV=1)

HSP 1 Score: 577 bits (1486), Expect = 2.44e-207
Identity = 291/302 (96.36%), Postives = 297/302 (98.34%), Query Frame = 0 

Query: 1   MSTRMEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60
           MSTRMEATVTQHF FSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR
Sbjct: 1   MSTRMEATVTQHFHFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSAR 60

Query: 61  RRTVALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKT 120
           RRTVALNIACSY+NST LESGNHFASFDESLAIQRKCREIESYL+GRCIYLVGMMGSGKT
Sbjct: 61  RRTVALNIACSYDNSTALESGNHFASFDESLAIQRKCREIESYLNGRCIYLVGMMGSGKT 120

Query: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 180
           TVGNVLSNALGYSFADSDSLVEEDVGISVAEIF VYGEDFFREKETEALRKLSLMHQFVI
Sbjct: 121 TVGNVLSNALGYSFADSDSLVEEDVGISVAEIFKVYGEDFFREKETEALRKLSLMHQFVI 180

Query: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 240
           STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGT SRPLLHHDSTDAYSKTV+R
Sbjct: 181 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTSSRPLLHHDSTDAYSKTVIR 240

Query: 241 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSC 300
           LSTLLEERGEAYAKAEVRV C+KLAAKLGTK+VCNVTPMAIAIEV+EQISIFLERENGSC
Sbjct: 241 LSTLLEERGEAYAKAEVRVSCRKLAAKLGTKEVCNVTPMAIAIEVVEQISIFLERENGSC 300

Query: 301 AF 302
           AF
Sbjct: 301 AF 302

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match: A0A6J1I3Z2 (Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111470366 PE=3 SV=1)

HSP 1 Score: 488 bits (1256), Expect = 2.33e-172
Identity = 246/298 (82.55%), Postives = 267/298 (89.60%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTV 64
           MEAT+TQ  QFSPWIHS SI AKPKGSL FSRR  EQH+L+ PFSFNLQLSR S+  RTV
Sbjct: 1   MEATLTQQLQFSPWIHSKSIAAKPKGSLHFSRRLEEQHMLQAPFSFNLQLSRRSSHHRTV 60

Query: 65  ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN 124
           AL I+CSY+NS+VLESGNH    DE+  IQRK REIESYL+GRCIY VGMMGSGKTTVG 
Sbjct: 61  ALKISCSYKNSSVLESGNHRVPVDETFTIQRKSREIESYLNGRCIYFVGMMGSGKTTVGK 120

Query: 125 VLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGG 184
           VLSNALGYSF+DSDSLVE+DVGISVAEIF VYGEDFFRE+ETEALRKLSLM+QFVISTGG
Sbjct: 121 VLSNALGYSFSDSDSLVEQDVGISVAEIFKVYGEDFFRERETEALRKLSLMNQFVISTGG 180

Query: 185 GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL 244
           G VTRTINWK+M +GISVWLDVPLEALVKRISAVGT SRPLLH+DSTDAYSKT+VRLSTL
Sbjct: 181 GAVTRTINWKYMREGISVWLDVPLEALVKRISAVGTNSRPLLHNDSTDAYSKTLVRLSTL 240

Query: 245 LEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF 302
           LEERGEAYA AEVRV C+K+AAKLGTKDV NVTPMAIAIE LEQI IFL+RE+G CAF
Sbjct: 241 LEERGEAYANAEVRVSCEKIAAKLGTKDVSNVTPMAIAIEALEQIEIFLKREDGYCAF 298

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match: A0A6J1EQI5 (Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111434938 PE=3 SV=1)

HSP 1 Score: 486 bits (1251), Expect = 1.35e-171
Identity = 245/298 (82.21%), Postives = 267/298 (89.60%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTV 64
           MEATVTQ  QFSPWIHS SI AKPKGSL FSRR  EQH+L+ PFSFNLQLSR S+  R V
Sbjct: 1   MEATVTQQLQFSPWIHSKSIAAKPKGSLHFSRRLEEQHMLQAPFSFNLQLSRRSSHHRIV 60

Query: 65  ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN 124
           AL I+CSY+NS+VLESGNH  S DE+L IQRK REIES+L+GRCIY VGMMGSGKTTVG 
Sbjct: 61  ALKISCSYQNSSVLESGNHRVSVDETLTIQRKSREIESHLNGRCIYFVGMMGSGKTTVGK 120

Query: 125 VLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGG 184
           VLSNALGYSF+DSDSLVE+DVGISVAEIF VYGEDFFRE+ETEALRKLSLM+QFVISTGG
Sbjct: 121 VLSNALGYSFSDSDSLVEQDVGISVAEIFKVYGEDFFRERETEALRKLSLMNQFVISTGG 180

Query: 185 GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL 244
           G VTR INWK+M +GISVWLDVPLEALVKRISAVGT SRPLLH+DSTDAYSKT++RLSTL
Sbjct: 181 GAVTRMINWKYMREGISVWLDVPLEALVKRISAVGTNSRPLLHNDSTDAYSKTLIRLSTL 240

Query: 245 LEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF 302
           LEERGEAYA AEVRV C+K+AAKLGTKDV NVTPMAIAIE LEQI IFL+RE+G CAF
Sbjct: 241 LEERGEAYANAEVRVSCEKIAAKLGTKDVSNVTPMAIAIEALEQIEIFLKREDGYCAF 298

[Close]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match: A0A1S3C781 (Shikimate kinase OS=Cucumis melo OX=3656 GN=LOC103497472 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 1.10e-170
Identity = 247/298 (82.89%), Postives = 266/298 (89.26%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRTV 64
           ME TV Q  QFSPWIHS S+ AKPKGSL F RR AEQ IL+ PFSF+L++SR S  RRTV
Sbjct: 1   METTVMQQLQFSPWIHSKSVSAKPKGSLHFPRRLAEQDILQAPFSFDLRVSRHSNHRRTV 60

Query: 65  ALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVGN 124
           AL I+CSY+NS+VLESGNH AS DESLAIQRK REIESYL+GR IYLVGMMGSGKTTVG 
Sbjct: 61  ALKISCSYKNSSVLESGNHCASVDESLAIQRKSREIESYLNGRSIYLVGMMGSGKTTVGK 120

Query: 125 VLSNALGYSFADSDSLVEEDVGISVAEIFNVYGEDFFREKETEALRKLSLMHQFVISTGG 184
           VLSNALGYSF+DSDSLVEED GISVAEIF VYGEDFFRE+ETEALRKLSLM QFVISTGG
Sbjct: 121 VLSNALGYSFSDSDSLVEEDTGISVAEIFKVYGEDFFRERETEALRKLSLMRQFVISTGG 180

Query: 185 GVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLSTL 244
           G VTR+INWK+M+KGISVWLDVPLEALVKRISAVGT SRPLLHHDSTDAYSKT+VRLSTL
Sbjct: 181 GAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHHDSTDAYSKTLVRLSTL 240

Query: 245 LEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENGSCAF 302
           LEERGEAYA AEV V C+K+AAKLGTKDV NVTPMAIAIE LEQI IFL+RE+G CAF
Sbjct: 241 LEERGEAYANAEVTVSCEKIAAKLGTKDVSNVTPMAIAIEALEQIEIFLKREDGYCAF 298

[Close]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match: AT2G21940.1 (shikimate kinase 1 )

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-76
Identity = 152/294 (51.70%), Postives = 201/294 (68.37%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKP-KGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA +TQ  Q+  W+    +  KP +GSL++S++       R      LQ  R + +RR 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 65  VALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVG 124
           V+  ++CS  NS+ L        FDE + ++RK  E++ YL+GR +YLVGMMGSGKTTVG
Sbjct: 61  VSPAVSCSDNNSSALLETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVG 120

Query: 125 NVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVIST 184
            ++S  LGY+F D D+L+E+ + G SVAEIF  +GE+FFR KET+AL+KLS  +Q V+ST
Sbjct: 121 KLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVST 180

Query: 185 GGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLS 244
           GGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH +S DAYS    RLS
Sbjct: 181 GGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLS 240

Query: 245 TLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
            + +ERGEAY  A  RV  + +AAK G K+V ++TP  IAIE  EQ+  FLE+E
Sbjct: 241 AIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293

[Close]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match: AT2G21940.2 (shikimate kinase 1 )

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-76
Identity = 152/294 (51.70%), Postives = 201/294 (68.37%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKP-KGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA +TQ  Q+  W+    +  KP +GSL++S++       R      LQ  R + +RR 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 65  VALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVG 124
           V+  ++CS  NS+ L        FDE + ++RK  E++ YL+GR +YLVGMMGSGKTTVG
Sbjct: 61  VSPAVSCSDNNSSALLETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVG 120

Query: 125 NVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVIST 184
            ++S  LGY+F D D+L+E+ + G SVAEIF  +GE+FFR KET+AL+KLS  +Q V+ST
Sbjct: 121 KLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVST 180

Query: 185 GGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLS 244
           GGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH +S DAYS    RLS
Sbjct: 181 GGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLS 240

Query: 245 TLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
            + +ERGEAY  A  RV  + +AAK G K+V ++TP  IAIE  EQ+  FLE+E
Sbjct: 241 AIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293

[Close]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match: AT2G21940.5 (shikimate kinase 1 )

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-76
Identity = 152/294 (51.70%), Postives = 201/294 (68.37%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKP-KGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA +TQ  Q+  W+    +  KP +GSL++S++       R      LQ  R + +RR 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 65  VALNIACSYENSTVLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTTVG 124
           V+  ++CS  NS+ L        FDE + ++RK  E++ YL+GR +YLVGMMGSGKTTVG
Sbjct: 61  VSPAVSCSDNNSSALLETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVG 120

Query: 125 NVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVIST 184
            ++S  LGY+F D D+L+E+ + G SVAEIF  +GE+FFR KET+AL+KLS  +Q V+ST
Sbjct: 121 KLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVST 180

Query: 185 GGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVRLS 244
           GGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH +S DAYS    RLS
Sbjct: 181 GGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLS 240

Query: 245 TLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
            + +ERGEAY  A  RV  + +AAK G K+V ++TP  IAIE  EQ+  FLE+E
Sbjct: 241 AIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293

[Close]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match: AT2G21940.4 (shikimate kinase 1 )

HSP 1 Score: 283.5 bits (724), Expect = 2.0e-76
Identity = 154/296 (52.03%), Postives = 207/296 (69.93%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKP-KGSLQFSRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA +TQ  Q+  W+    +  KP +GSL++S++       R      LQ  R + +RR 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 65  VALNIACSYENST--VLESGNHFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTT 124
           V+  ++CS  NS+  +LE+G+ +  FDE + ++RK  E++ YL+GR +YLVGMMGSGKTT
Sbjct: 61  VSPAVSCSDNNSSGALLETGSVY-PFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTT 120

Query: 125 VGNVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLMHQFVI 184
           VG ++S  LGY+F D D+L+E+ + G SVAEIF  +GE+FFR KET+AL+KLS  +Q V+
Sbjct: 121 VGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVV 180

Query: 185 STGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHDSTDAYSKTVVR 244
           STGGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH +S DAYS    R
Sbjct: 181 STGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKR 240

Query: 245 LSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERE 297
           LS + +ERGEAY  A  RV  + +AAK G K+V ++TP  IAIE  EQ+  FLE+E
Sbjct: 241 LSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 294

[Close]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match: AT4G39540.1 (shikimate kinase 2 )

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-73
Identity = 150/300 (50.00%), Postives = 201/300 (67.00%), Query Frame = 0 

Query: 5   MEATVTQHFQFSPWIHSSSIVAKPKGSLQF-SRRFAEQHILRVPFSFNLQLSRPSARRRT 64
           MEA   Q FQ+S W    +   KP+GSL++ ++R  E    RV       ++    +RR 
Sbjct: 1   MEAATVQRFQYSSWNDLRNFEGKPRGSLRYNTQRIKEDKRFRV-------VALTLDKRRD 60

Query: 65  VALNIACSYENSTVLESGN--HFASFDESLAIQRKCREIESYLDGRCIYLVGMMGSGKTT 124
             L       +S +LE+G+  H    +E   +++K  E++ YL+GR +YLVGMMGSGKTT
Sbjct: 61  HRLRSVSDKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTT 120

Query: 125 VGNVLSNALGYSFADSDSLVEEDV-GISVAEIFNVYGEDFFREKETEALRKLSLM-HQFV 184
           VG +++ +LGY+F D D+L+E+ + G SVAEIF  +GE  FREKETEAL+KLSLM HQ V
Sbjct: 121 VGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVV 180

Query: 185 ISTGGGVVTRTINWKHMNKGISVWLDVPLEALVKRISAVGTRSRPLLHHD-STDAYSKTV 244
           +STGGG V R INWK+M+KGIS+WLDVPLEAL  RI+AVGT SRPLLH D S D Y+  +
Sbjct: 181 VSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAAL 240

Query: 245 VRLSTLLEERGEAYAKAEVRVCCQKLAAKLGTKDVCNVTPMAIAIEVLEQISIFLERENG 299
            RLST+ + RGEAY KA  RV  + +  KLG + V ++TP  IAIE  EQ+  +LE+E+G
Sbjct: 241 NRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDG 293

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g10930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q004971.3e-8355.59Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1[more]
Q9SJ051.7e-7551.70Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV... [more]
Q8GY885.0e-7250.00Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK2 PE=1 SV... [more]
Q7X7H91.4e-6150.39Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK... [more]
Q5NTH42.6e-6055.50Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK... [more]
BLAST of Cp4.1LG05g10930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533300.18.46e-215100.00shikimate kinase, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
KAG7035252.11.91e-21199.01Shikimate kinase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022947888.17.78e-21198.68shikimate kinase, chloroplastic-like [Cucurbita moschata][more]
KAG6605292.11.30e-20898.99Shikimate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023006843.15.03e-20796.36shikimate kinase, chloroplastic-like [Cucurbita maxima][more]
BLAST of Cp4.1LG05g10930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G7V03.77e-21198.68Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111451641 PE=3 SV=1[more]
A0A6J1L6262.44e-20796.36Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111499514 PE=3 SV=1[more]
A0A6J1I3Z22.33e-17282.55Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111470366 PE=3 SV=1[more]
A0A6J1EQI51.35e-17182.21Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111434938 PE=3 SV=1[more]
A0A1S3C7811.10e-17082.89Shikimate kinase OS=Cucumis melo OX=3656 GN=LOC103497472 PE=3 SV=1[more]
BLAST of Cp4.1LG05g10930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21940.11.2e-7651.70shikimate kinase 1 [more]
AT2G21940.21.2e-7651.70shikimate kinase 1 [more]
AT2G21940.51.2e-7651.70shikimate kinase 1 [more]
AT2G21940.42.0e-7652.03shikimate kinase 1 [more]
AT4G39540.13.5e-7350.00shikimate kinase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01100SHIKIMTKNASEcoord: 133..146
score: 38.46
coord: 199..216
score: 34.62
coord: 109..124
score: 60.1
coord: 179..188
score: 65.38
coord: 161..169
score: 51.28
NoneNo IPR availablePANTHERPTHR21087SHIKIMATE KINASEcoord: 5..295
NoneNo IPR availablePANTHERPTHR21087:SF20SHIKIMATE KINASE 1, CHLOROPLASTIC-LIKE ISOFORM X1coord: 5..295
IPR031322Shikimate kinase/gluconokinasePFAMPF01202SKIcoord: 115..267
e-value: 8.9E-44
score: 149.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..300
e-value: 2.9E-64
score: 218.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..229
IPR023000Shikimate kinase, conserved sitePROSITEPS01128SHIKIMATE_KINASEcoord: 162..187
IPR000623Shikimate kinase/Threonine synthase-like 1HAMAPMF_00109Shikimate_kinasecoord: 106..290
score: 24.179214
IPR000623Shikimate kinase/Threonine synthase-like 1CDDcd00464SKcoord: 109..268
e-value: 7.39289E-54
score: 170.814

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g10930.1Cp4.1LG05g10930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0016310 phosphorylation
cellular_component GO:0009507 chloroplast
molecular_function GO:0005524 ATP binding
molecular_function GO:0004765 shikimate kinase activity