Homology
BLAST of Cp4.1LG05g10800 vs. ExPASy Swiss-Prot
Match:
Q6YV23 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CARA PE=2 SV=2)
HSP 1 Score: 501.1 bits (1289), Expect = 1.1e-140
Identity = 247/386 (63.99%), Postives = 286/386 (74.09%), Query Frame = 0
Query: 43 GAATIDLGERPWKVSDARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN-------- 102
G D +RPWK+SDARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGY
Sbjct: 61 GTVVDDGVQRPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY 120
Query: 103 -GQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIM 162
GQFVLMTNPHIGNTGVN DDEE+ +CFLAGL+IR+LSI TSNWRC +TL +YL++RNIM
Sbjct: 121 AGQFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIM 180
Query: 163 GIYDVDTRAITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYE 222
GIYDVDTRAITRRLREDGSLIGVLST++S++DDELLEM+++W IVGVDLISGV+C +PYE
Sbjct: 181 GIYDVDTRAITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYE 240
Query: 223 WVDRTDLEWEFKSGGQASETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL 282
W D+TD EWEFK GQ++E+FHVVAYDFGIK NILRRL SYGCKITVVP+ W ASE L L
Sbjct: 241 WSDKTDSEWEFKK-GQSTESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNL 300
Query: 283 KPDGVLFSNGPGIHLQFLMLLKQSSNYLGRYLFLEFVWAINCLARPW------------- 342
KPDGV FSNGPG +K +G+ + +
Sbjct: 301 KPDGVFFSNGPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALGGKTFKMKFGHHG 360
Query: 343 -----------------VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQY 390
NHNYAVDP SLPEGV+VTH+NLND SCAGL YPK+K++SLQY
Sbjct: 361 GNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNSCAGLQYPKMKLLSLQY 420
BLAST of Cp4.1LG05g10800 vs. ExPASy Swiss-Prot
Match:
Q9LVW7 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CARA PE=1 SV=1)
HSP 1 Score: 482.6 bits (1241), Expect = 4.1e-135
Identity = 250/431 (58.00%), Postives = 302/431 (70.07%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSV-PLSSHGAATIDLGERPWKVSDA 60
MA R + V SL+ + +G R IRCS PL+ + + E+PW +A
Sbjct: 3 MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIW AKSFGA GT++ E+VFNTSLTGY GQFVLMTNP IGNTGV
Sbjct: 63 RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
N DDEE+ QCFL GLVIR+LSISTSNWRC +TL DYL ER+IMG+YD+DTRAITRRLRED
Sbjct: 123 NPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRAITRRLRED 182
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTE+SK+DDELL+MSRSW+IVG+DLIS VSCKSPYEWVD+T+ EW+F + +
Sbjct: 183 GSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
+++ V+AYDFGIK NILRRL+SYGC+ITVVPST+ A+E LK+ PDG+LFSNGPG
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 362
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 392
NHNYAVDPASLP GVEVTHVNLNDGSCAGL++P++ VMSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 422
BLAST of Cp4.1LG05g10800 vs. ExPASy Swiss-Prot
Match:
P74587 (Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=carA PE=3 SV=2)
HSP 1 Score: 279.6 bits (714), Expect = 5.3e-74
Identity = 157/371 (42.32%), Postives = 218/371 (58.76%), Query Frame = 0
Query: 59 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTG 118
A LVL DG+ + SFGA GT VGEVVFNT +TGY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 68
Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 178
VN +DEE+ + G+V R+++ SNWR Q+L DYL+E I+GIY +DTRA+TR+LR
Sbjct: 69 VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 128
Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEF--KSG 238
G++ G +STE + + L + + ++ G++L+ V+ YEW D T+ W+F +
Sbjct: 129 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 188
Query: 239 GQASETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG-- 298
Q VVA DFG+K NILRRLASYGC++ VVP++ +A+E L+ PDG+ SNGPG
Sbjct: 189 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 248
Query: 299 -------IHLQFLMLLKQ-------SSNYLGRYLFLE---FVWAINCLARPW-------- 358
+ + L+ K+ LG L E + L +P
Sbjct: 249 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLGAETFKLKFGHRGLNQPCGLEQQVEI 308
Query: 359 --VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVF 390
NH +AV SL E VE+TH NLND + AGL + +L S+QYHPEASPGPHD+D +F
Sbjct: 309 TSQNHGFAVTEGSLAEEVEITHFNLNDKTVAGLRHKELPFFSVQYHPEASPGPHDADYLF 368
BLAST of Cp4.1LG05g10800 vs. ExPASy Swiss-Prot
Match:
Q8YXQ7 (Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=carA PE=3 SV=1)
HSP 1 Score: 279.3 bits (713), Expect = 6.9e-74
Identity = 156/373 (41.82%), Postives = 219/373 (58.71%), Query Frame = 0
Query: 59 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTG---------YNGQFVLMTNPHIGNTG 118
A LVL DG+ +R SFGA+GT +GEVVFNT +TG Y GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQIVVFTYPELGNTG 68
Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 178
VN +DEE+ + + G + R++ SNWR Q+L DYL + +I GI+ +DTRA+TR++R
Sbjct: 69 VNPEDEESARPQVRGAIARNICHKPSNWRSTQSLPDYLKQHHIPGIFGIDTRALTRKIRM 128
Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG- 238
G++ G +STE + L ++ + N+ G++L+ V+ + YEW D T WEF G
Sbjct: 129 YGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAVWEFNPDGT 188
Query: 239 -QASETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGP--- 298
+ E+ VVA DFG+K NILRRLASYGC++ VVP+ + E LK PDG+ SNGP
Sbjct: 189 VKNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPGDP 248
Query: 299 -----GIHLQFLMLLKQSSNY--------LGRYLFLE---FVWAINCLARP--------- 358
GI +L + + LG L E + L +P
Sbjct: 249 SAVTEGITTAKALLESEKPIFGICMGHQILGHALGAETFKLKFGHRGLNQPAGLTQRVEI 308
Query: 359 -WVNHNYAVDPASLPEG-VEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSV 391
NH++A+DP SLPE VE++H+NLND + AGL + L + S+QYHPEASPGPHD+D +
Sbjct: 309 TSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSLPIFSVQYHPEASPGPHDADYL 368
BLAST of Cp4.1LG05g10800 vs. ExPASy Swiss-Prot
Match:
Q5N0L0 (Carbamoyl-phosphate synthase small chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=carA PE=3 SV=1)
HSP 1 Score: 267.7 bits (683), Expect = 2.1e-70
Identity = 153/370 (41.35%), Postives = 213/370 (57.57%), Query Frame = 0
Query: 59 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTG 118
A LVL DGS++ + GA+GT +GEVVFNT +TGY GQ V T P +GNTG
Sbjct: 19 ALLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTG 78
Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRE 178
VN +DEE+ + ++GL+ R+++ SNWR ++L DYL + NI+GIY +DTRA+T+ LR
Sbjct: 79 VNPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRS 138
Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQ 238
G++ G +ST ++ E+ + ++ G++L+ V+ PYEW T WEF G
Sbjct: 139 TGAMNGGISTTILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEFIE-GP 198
Query: 239 ASETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGP----- 298
+E+ VVA DFG+K NILRRLASYGC++ VVP+ E L+ +PDGV SNGP
Sbjct: 199 TTESLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNGPGDPAT 258
Query: 299 --------------GIHLQFLMLLKQ-SSNYLGRYLFLEFVWAINCLARP---------- 358
G+ L + L Q + LG F + + L P
Sbjct: 259 VKNGISTAQALLQTGLPLFGICLGHQILGSALGAQTF-KLKFGHRGLNHPCGLSQQVEIT 318
Query: 359 WVNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFG 390
NH +A+ SL VEVTH+NLND + AGL + L V S+QYHPEASPGPHDSD +F
Sbjct: 319 GQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHLPVFSVQYHPEASPGPHDSDYLFE 378
BLAST of Cp4.1LG05g10800 vs. NCBI nr
Match:
XP_023532073.1 (LOW QUALITY PROTEIN: carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 697 bits (1800), Expect = 3.22e-251
Identity = 359/431 (83.29%), Postives = 363/431 (84.22%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGXPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ LG+ L +
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. NCBI nr
Match:
KAG7035263.1 (Carbamoyl-phosphate synthase small chain, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 695 bits (1793), Expect = 3.74e-250
Identity = 357/431 (82.83%), Postives = 363/431 (84.22%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL+PDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ LG+ L +
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. NCBI nr
Match:
XP_022947190.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 694 bits (1790), Expect = 1.07e-249
Identity = 356/431 (82.60%), Postives = 363/431 (84.22%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL+PDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ +G+ L +
Sbjct: 301 YAVETVKQLVGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. NCBI nr
Match:
XP_023007174.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_023007175.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_023007176.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 693 bits (1788), Expect = 2.16e-249
Identity = 356/431 (82.60%), Postives = 361/431 (83.76%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGF KSRDFTIRCSVPL SHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFAKSRDFTIRCSVPLPSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ LG+ L +
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. NCBI nr
Match:
XP_038893406.1 (carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 671 bits (1730), Expect = 1.53e-240
Identity = 345/432 (79.86%), Postives = 358/432 (82.87%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSS-HGAATIDLGERPWKVSDA 60
MAIRVMDLVSGAS NCFHFKN KG+VKSRDF+IRCSVPLSS HGAATIDLGERPWKVSDA
Sbjct: 1 MAIRVMDLVSGASFNCFHFKNAKGYVKSRDFSIRCSVPLSSTHGAATIDLGERPWKVSDA 60
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY GQFVLMTNPHIGNTGV
Sbjct: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTD EWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDSEWEFKSGGYS 240
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
S+TFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 SKTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNNRVEISA 360
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 392
NHNYA+DPASLPEGVEVTH+NLNDGSCAGLA+PKLK+MSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAIDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
BLAST of Cp4.1LG05g10800 vs. ExPASy TrEMBL
Match:
A0A6J1G657 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451135 PE=3 SV=1)
HSP 1 Score: 694 bits (1790), Expect = 5.19e-250
Identity = 356/431 (82.60%), Postives = 363/431 (84.22%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKL+PDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ +G+ L +
Sbjct: 301 YAVETVKQLVGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. ExPASy TrEMBL
Match:
A0A6J1L483 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499747 PE=3 SV=1)
HSP 1 Score: 693 bits (1788), Expect = 1.05e-249
Identity = 356/431 (82.60%), Postives = 361/431 (83.76%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60
MAIRVMDLVSGASLNCFHFKNNKGF KSRDFTIRCSVPL SHGAATIDLGERPWKVSDAR
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNNKGFAKSRDFTIRCSVPLPSHGAATIDLGERPWKVSDAR 60
Query: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY---------NGQFVLMTNPHIGNTGVN 120
LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY NGQFVLMTNPHIGNTGVN
Sbjct: 61 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120
Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180
Query: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
Query: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQFL 300
ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVP 300
Query: 301 MLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------V 360
++ LG+ L +
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
Query: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 392
NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
BLAST of Cp4.1LG05g10800 vs. ExPASy TrEMBL
Match:
A0A1S3BDW8 (carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488827 PE=3 SV=1)
HSP 1 Score: 665 bits (1716), Expect = 1.00e-238
Identity = 344/431 (79.81%), Postives = 355/431 (82.37%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSS-HGAATIDLGERPWKVSDA 60
MAIRVMDLVSGASLNCFHFKN KG VKSR F+IRCSVPLSS GAATIDLGERPWKVSDA
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGY GQFVLMTNPHIGNTGV
Sbjct: 61 RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 391
NHNYAVDPASLPEGVEVTH+NLNDGSCAGLA+PKLK+MSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
BLAST of Cp4.1LG05g10800 vs. ExPASy TrEMBL
Match:
A0A6J1JPA8 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486271 PE=3 SV=1)
HSP 1 Score: 661 bits (1705), Expect = 4.73e-237
Identity = 340/431 (78.89%), Postives = 354/431 (82.13%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSS-HGAATIDLGERPWKVSDA 60
MAIRVMDLVSGASLNCFHFKN KG SRDF+IRCSVPLSS HGAATIDLGERPWKVSDA
Sbjct: 1 MAIRVMDLVSGASLNCFHFKNPKGHQNSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIW AKSFGASGTQVGEVVFNTSLTGY GQFVLMTNPHIGNTGV
Sbjct: 61 RLVLEDGSIWSAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL+ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLMERNIMGIYDVDTRAITRRLRED 180
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRT LEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTSLEWEFKSGGHS 240
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPG
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDNRVEISA 360
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 391
NHNYAVDPASLPEG+EVTH+NLNDGSCAGLA+PKLK+MSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGIEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
BLAST of Cp4.1LG05g10800 vs. ExPASy TrEMBL
Match:
A0A6J1H064 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458831 PE=3 SV=1)
HSP 1 Score: 660 bits (1704), Expect = 6.72e-237
Identity = 341/431 (79.12%), Postives = 354/431 (82.13%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSS-HGAATIDLGERPWKVSDA 60
MAIRVMDLVSG SLNCFHFKN KG KSRDF+IRCSVPLSS HGAATIDLGERPWKVSDA
Sbjct: 1 MAIRVMDLVSGVSLNCFHFKNPKGHQKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGY GQFVLMTNPHIGNTGV
Sbjct: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITRRLRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLRED 180
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWV+RT LEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVNRTSLEWEFKSGGHS 240
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAA+ETLKLKPDGVLFSNGPG
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAATETLKLKPDGVLFSNGPGDPSAV 300
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDDRVEISA 360
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 391
NHNYAVDPASLPEGVEVTH+NLNDGSCAGLA+PKLK+MSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420
BLAST of Cp4.1LG05g10800 vs. TAIR 10
Match:
AT3G27740.1 (carbamoyl phosphate synthetase A )
HSP 1 Score: 482.6 bits (1241), Expect = 2.9e-136
Identity = 250/431 (58.00%), Postives = 302/431 (70.07%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSV-PLSSHGAATIDLGERPWKVSDA 60
MA R + V SL+ + +G R IRCS PL+ + + E+PW +A
Sbjct: 3 MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIW AKSFGA GT++ E+VFNTSLTGY GQFVLMTNP IGNTGV
Sbjct: 63 RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
N DDEE+ QCFL GLVIR+LSISTSNWRC +TL DYL ER+IMG+YD+DTRAITRRLRED
Sbjct: 123 NPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRAITRRLRED 182
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
GSLIGVLSTE+SK+DDELL+MSRSW+IVG+DLIS VSCKSPYEWVD+T+ EW+F + +
Sbjct: 183 GSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
+++ V+AYDFGIK NILRRL+SYGC+ITVVPST+ A+E LK+ PDG+LFSNGPG
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 362
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 392
NHNYAVDPASLP GVEVTHVNLNDGSCAGL++P++ VMSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 422
BLAST of Cp4.1LG05g10800 vs. TAIR 10
Match:
AT3G27740.2 (carbamoyl phosphate synthetase A )
HSP 1 Score: 330.1 bits (845), Expect = 2.4e-90
Identity = 191/431 (44.32%), Postives = 235/431 (54.52%), Query Frame = 0
Query: 1 MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSV-PLSSHGAATIDLGERPWKVSDA 60
MA R + V SL+ + +G R IRCS PL+ + + E+PW +A
Sbjct: 3 MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62
Query: 61 RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYN---------GQFVLMTNPHIGNTGV 120
RLVLEDGSIW AKSFGA GT++ E+VFNTSLTGY GQFVLMTNP IGNTGV
Sbjct: 63 RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122
Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180
N
Sbjct: 123 N----------------------------------------------------------- 182
Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
DDELL+MSRSW+IVG+DLIS VSCKSPYEWVD+T+ EW+F + +
Sbjct: 183 -------------PDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242
Query: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGIHLQF 300
+++ V+AYDFGIK NILRRL+SYGC+ITVVPST+ A+E LK+ PDG+LFSNGPG
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302
Query: 301 LMLLKQSSNYLGRYLFLEFVWAINCLARPW------------------------------ 360
++ LG+ L +
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 357
Query: 361 VNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGD 392
NHNYAVDPASLP GVEVTHVNLNDGSCAGL++P++ VMSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 357
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q6YV23 | 1.1e-140 | 63.99 | Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. j... | [more] |
Q9LVW7 | 4.1e-135 | 58.00 | Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana ... | [more] |
P74587 | 5.3e-74 | 42.32 | Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 /... | [more] |
Q8YXQ7 | 6.9e-74 | 41.82 | Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25... | [more] |
Q5N0L0 | 2.1e-70 | 41.35 | Carbamoyl-phosphate synthase small chain OS=Synechococcus sp. (strain ATCC 27144... | [more] |
Match Name | E-value | Identity | Description | |
XP_023532073.1 | 3.22e-251 | 83.29 | LOW QUALITY PROTEIN: carbamoyl-phosphate synthase small chain, chloroplastic-lik... | [more] |
KAG7035263.1 | 3.74e-250 | 82.83 | Carbamoyl-phosphate synthase small chain, chloroplastic [Cucurbita argyrosperma ... | [more] |
XP_022947190.1 | 1.07e-249 | 82.60 | carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita moschata... | [more] |
XP_023007174.1 | 2.16e-249 | 82.60 | carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] ... | [more] |
XP_038893406.1 | 1.53e-240 | 79.86 | carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hi... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G657 | 5.19e-250 | 82.60 | carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moscha... | [more] |
A0A6J1L483 | 1.05e-249 | 82.60 | carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima... | [more] |
A0A1S3BDW8 | 1.00e-238 | 79.81 | carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 ... | [more] |
A0A6J1JPA8 | 4.73e-237 | 78.89 | carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima... | [more] |
A0A6J1H064 | 6.72e-237 | 79.12 | carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moscha... | [more] |