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Cp4.1LG05g10670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGATAAGGATGATAACACATCACCTGTTCTTTTCACACCCACCGCCATAACCCAACCATCCCATTAAAACCATCCTATATTCCCTCACCTCTTAACCCAAACAAACAGAGACATGGGGAGTTCAGAGGAGGAAAGATTAGTTCAAATGATTGATGATTTCATTGAATCACCTCAACCTCCAACCCCTTCTTCTTCAAATCCTCTCCCTCTTCCCTCCAACACCCATTATTTTTTCACTTTAAAGGTACTAATTCCTTCCATTTTACAATACCCATTACACAAAAACCCTTCAATTCTATGCTTTAATTCAATTCATGTGTATAGGAGATTCTTGGGAACACTGCAAGAACAGCTGAAATTGAAGTGAGTCAGGCTGTGATGAAGCACATGAGAAGGAAAACAGATGCTCCCAAGACCACCCCCCTTAAGAAATGGCTTGTCATGAAGCTCAAAATGGACGGCTATCATTCTTGCGACCTTTGTCACACCTCTTGGGTCACTTCCACGGGATGCCCACCCGGTGAGTCCAAATATCTGCTAGAAGTGGACTTAGACTATTACAAATAATAACATATTTCATCTATAACAGGGGATTACGAGTACATTGAGATGAAAGCAGAGGGTGGGAAAAGGATGATAATAGACATAGATTTCAAGGCGCAATTTGAAGTGGCAAGAGCAACAGAGAGTTACAAGCAGCTGACACAAGCACTGCCATCGGTGTTCGTAGGGAGTGAAGAGAAGGTTGTGCAAATAATATCAATTCTATGCTCGGCAGCCAAGCAGTCGCTTAAGGAGAGTGGCCTCCATATTCCCCCTTGCAGAACTTCCACTTACATGCAGCGCAAATGGGTGGCTACTTCCCAACAAAGGCCCAAGGCAGCGCCGTTGGTGAAGGCAATTGGGAAGAGGGTTTGGGGCGGTGGCTCTGCCTTGTCCACTCAATTTTCCAATATGAGTATCAATTGTTGTTGA AAAGATAAGGATGATAACACATCACCTGTTCTTTTCACACCCACCGCCATAACCCAACCATCCCATTAAAACCATCCTATATTCCCTCACCTCTTAACCCAAACAAACAGAGACATGGGGAGTTCAGAGGAGGAAAGATTAGTTCAAATGATTGATGATTTCATTGAATCACCTCAACCTCCAACCCCTTCTTCTTCAAATCCTCTCCCTCTTCCCTCCAACACCCATTATTTTTTCACTTTAAAGGAGATTCTTGGGAACACTGCAAGAACAGCTGAAATTGAAGCGCAATTTGAAGTGGCAAGAGCAACAGAGAGTTACAAGCAGCTGACACAAGCACTGCCATCGGTGTTCGTAGGGAGTGAAGAGAAGGTTGTGCAAATAATATCAATTCTATGCTCGGCAGCCAAGCAGTCGCTTAAGGAGAGTGGCCTCCATATTCCCCCTTGCAGAACTTCCACTTACATGCAGCGCAAATGGGTGGCTACTTCCCAACAAAGGCCCAAGGCAGCGCCGTTGGTGAAGGCAATTGGGAAGAGGGTTTGGGGCGGTGGCTCTGCCTTGTCCACTCAATTTTCCAATATGAGTATCAATTGTTGTTGA ATGGGGAGTTCAGAGGAGGAAAGATTAGTTCAAATGATTGATGATTTCATTGAATCACCTCAACCTCCAACCCCTTCTTCTTCAAATCCTCTCCCTCTTCCCTCCAACACCCATTATTTTTTCACTTTAAAGGAGATTCTTGGGAACACTGCAAGAACAGCTGAAATTGAAGCGCAATTTGAAGTGGCAAGAGCAACAGAGAGTTACAAGCAGCTGACACAAGCACTGCCATCGGTGTTCGTAGGGAGTGAAGAGAAGGTTGTGCAAATAATATCAATTCTATGCTCGGCAGCCAAGCAGTCGCTTAAGGAGAGTGGCCTCCATATTCCCCCTTGCAGAACTTCCACTTACATGCAGCGCAAATGGGTGGCTACTTCCCAACAAAGGCCCAAGGCAGCGCCGTTGGTGAAGGCAATTGGGAAGAGGGTTTGGGGCGGTGGCTCTGCCTTGTCCACTCAATTTTCCAATATGAGTATCAATTGTTGTTGA MGSSEEERLVQMIDDFIESPQPPTPSSSNPLPLPSNTHYFFTLKEILGNTARTAEIEAQFEVARATESYKQLTQALPSVFVGSEEKVVQIISILCSAAKQSLKESGLHIPPCRTSTYMQRKWVATSQQRPKAAPLVKAIGKRVWGGGSALSTQFSNMSINCC Homology
BLAST of Cp4.1LG05g10670 vs. NCBI nr
Match: XP_023533994.1 (uncharacterized protein LOC111795677 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290 bits (741), Expect = 5.46e-97 Identity = 162/237 (68.35%), Postives = 162/237 (68.35%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. NCBI nr
Match: KAG7035272.1 (hypothetical protein SDJN02_02067, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 264 bits (674), Expect = 1.01e-86 Identity = 154/242 (63.64%), Postives = 156/242 (64.46%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. NCBI nr
Match: KAG6605316.1 (hypothetical protein SDJN03_02633, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 263 bits (673), Expect = 1.34e-86 Identity = 153/240 (63.75%), Postives = 156/240 (65.00%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. NCBI nr
Match: XP_023007236.1 (uncharacterized protein LOC111499781 [Cucurbita maxima]) HSP 1 Score: 263 bits (673), Expect = 1.44e-86 Identity = 153/242 (63.22%), Postives = 156/242 (64.46%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. NCBI nr
Match: XP_022947663.1 (uncharacterized protein LOC111451460 isoform X1 [Cucurbita moschata] >XP_022947664.1 uncharacterized protein LOC111451460 isoform X2 [Cucurbita moschata] >XP_022947665.1 uncharacterized protein LOC111451460 isoform X1 [Cucurbita moschata]) HSP 1 Score: 263 bits (671), Expect = 2.71e-86 Identity = 153/240 (63.75%), Postives = 156/240 (65.00%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. ExPASy TrEMBL
Match: A0A6J1KZZ7 (uncharacterized protein LOC111499781 OS=Cucurbita maxima OX=3661 GN=LOC111499781 PE=4 SV=1) HSP 1 Score: 263 bits (673), Expect = 6.95e-87 Identity = 153/242 (63.22%), Postives = 156/242 (64.46%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. ExPASy TrEMBL
Match: A0A6J1G7H8 (uncharacterized protein LOC111451460 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451460 PE=4 SV=1) HSP 1 Score: 263 bits (671), Expect = 1.31e-86 Identity = 153/240 (63.75%), Postives = 156/240 (65.00%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. ExPASy TrEMBL
Match: A0A6J1CPS4 (uncharacterized protein LOC111013453 OS=Momordica charantia OX=3673 GN=LOC111013453 PE=4 SV=1) HSP 1 Score: 156 bits (394), Expect = 1.82e-44 Identity = 106/253 (41.90%), Postives = 129/253 (50.99%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. ExPASy TrEMBL
Match: A0A1S3CDH7 (uncharacterized protein LOC103499645 OS=Cucumis melo OX=3656 GN=LOC103499645 PE=4 SV=1) HSP 1 Score: 137 bits (345), Expect = 4.47e-37 Identity = 90/204 (44.12%), Postives = 102/204 (50.00%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. ExPASy TrEMBL
Match: A0A6P4A673 (uncharacterized protein LOC107425572 OS=Ziziphus jujuba OX=326968 GN=LOC107425572 PE=4 SV=1) HSP 1 Score: 134 bits (338), Expect = 5.00e-36 Identity = 95/254 (37.40%), Postives = 126/254 (49.61%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. TAIR 10
Match: AT2G38820.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 33/71 (46.48%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. TAIR 10
Match: AT2G38820.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 33/71 (46.48%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. TAIR 10
Match: AT4G14620.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 79.0 bits (193), Expect = 4.0e-15 Identity = 35/92 (38.04%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. TAIR 10
Match: AT1G77160.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 75.9 bits (185), Expect = 3.4e-14 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of Cp4.1LG05g10670 vs. TAIR 10
Match: AT1G77145.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 75.1 bits (183), Expect = 5.8e-14 Identity = 32/75 (42.67%), Postives = 55/75 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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