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Cp4.1LG05g10540 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCTCCGAGTCATTGAAGTCTGCAATGGAGAGCTCGCCGAATCCGAACACAAACCCAAACTCTAACCCCACTCGAATCCAGAATCCCGTATCGTCACAGATTGCTGCGTTATGGCCGACCATTGATGGTTCACTGGGGTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGCGATTCTCACTCGTTTCCTCGCATCCGACCCTGTGAGTTTGCCTCTCTATAATTTTGGTGTACGCAGCTGTACTTTCAATTATTTTCTTGATTTATACTTAGAGGTAATCGTTAAAGGATGATGAATCGAGTTATAACTTCTGTTCAGAGGAGAACTTGAATCAGACCAATTCCTGACCTCTATATTTCAATGACGGTAGCATTAGGTTGTTGTTGTTGTTGAGATGTTTTTAGTCTTATCATTACTCTATTTCTGTTTCGCAAGGTATGTTTCGATGTGTGGTATGCCAAGAATCCAACCACTATGTAGAGAAATGGACGATGTCGTTGTAGATATTCATATTAAAAAACTGAACGCCCATTGATTTACCGTAGTCCATTTGCTTTCTCGATTAGGCTTGGTTCATAAATACTGGGAGTTCTAAGCTGTTAAATGTTCTAATACCCTGATCTCTAAGTGTAAATTAAGGAAATAATTGTCTTGAGTTTGTTAGCTTTTGTGATGATGATACTTTCCTCAATGATACCTTTATACTCTGATCATTTGATAAAAAACTGGTTAAAAAATCAGCGATCCTGTTCATATTCATTAAATTGAGTCTCAAGAATTTAGAGGTATTATATCGTTTTCCAAAGTCATCCCTCTGTTCAAGTGTGTAGTTATGCGTTTCTGTCACTTGGCACTTTATGTCTTACAAAGTACAGACAATTTCGAAGGAAGCTAAATATTTTTGGTTCTTCCTCTCCAAGTATACAATATTTTTGAACTTTGGCCTTGGACTGCTTGTCATAGTTGCAATTCAATTGAACTCCATTATGCATATCCCTTTTTTAAATGTGGTGCAGATTCCTGGTTCTTGCATTCCATGTATGCATCAATTTAAAAGTTTGGCCTCAGATTGATTGTTGTGGTTGCCGTTCATTTCATTTTGCTTATCATTTTTGTAAGAAAAAATGTGTATGAACTTCATTATGCATCGATCTGGTACCTAGAGGGGTACCTACGTGTGTGTATGTATGAATTTAGTATAAACCTAATAGGAAAATAAGGGTAGTTTTGTACGTAAAAAGGGTGGTTTTTGTCAGTGCACATGCATGTGGATGAGAAACCCTCAAATAGGGCCTTTTCACAGTTGTTTGTTCTGTGTTAAATGCAGTCTCTTCCTTTTCATGTATCTCCTAGGTGCTAAGGGCATTGATCGTTTGGAGATACTCTCTGAGGCCCTCAGTTCAAGCCAACTAGGAAAATAAGGGTGGTTTTGTGCGAACGTGTATGTCATAATTAGGGTGATCCACCTAGGGTTGTGTGCACGGTACAAGGATGGTTTTGTGCATGATACAGGGTTGTCCATCTATGTATGAGTACTCTCCTAAGCCATGGCTTCAACCCACAAGCTTGAAAACTTAATAACATATAACTACAGGGCCCTGGGTTGTGTGTGTGTGTGTAATAAGGGTGGATTTTTGTTTTTGTTTTGTTTTGTTTTTCTTTTTTCTTTTTTCTTGAGATACTCTCCAAGGGCCTAGGTTCTACCCACAAGCTTGAAAACATAATAACTTATAAAACCTGTTGTTCCTCTGACTTGGACTTGGTTTTGGCTAAGCCTCTTTGGGGATCAGTGGAAAGGCTCGTGTGATGCAGAGATGGTCCCTCAACACCTCAGTTTTATTTTTTATTTCCTTTCTATTTCATTGTTACACTTTCCGTCCAATGTACACAAGTCACAGTGATTAAAACTTAAAAGTGATAATATACCTGTTGCTTAATTTTTATTTTAATCTTATATTTGTAAGTGTCCGGATTAGCATCGACTAGTCTCAATATATGGTGGGAAATTCTGGACACTTCTCTTGTGAAAATGTTTATATCATTGGTGTCATAGATTCAAGTCCATAATTTGTTTGTAACAAATTGTAGAAGTTCAACACATCTAAGAAAGCTACGTTCTTTCTTTGGTTTATTTACTATGAAAAGTTTGACACTTCAGAAAAGTTCGACATGTCTAAGAAAGCTAATGCTTGATGCTCTTAGTTGGTTTATGGTTTTTCCAAATGAGAGATCCGGTTTCCTAGCTTCAGTTTTTGTATGTCATCTTTTCCATGGTATGAAAAAGACCTTTTGGATGACTATAAACCAAGTGTCTTTTGGTTTCCTTAGAATTAGAAGAATTCACGGATGTTCGGGAATGTTTTCCCAACTTTTCATAGCTTTTTGGTTTTGTTTTATTTCATGCTTTGTATTGGTGTAAACATGCACACCCTTTTAGAGATTATAATCCATCTCCTTTAATTTCTAATTGAAGAGCTCTTTTGCAATGCCTCTTTTGGTGTTGGAAGCCCAATAAGCACCTTGTATTTCATTCATCAATGAAATTGTTTCTCTTCTAAAATAACAGACAAAATTTAGTATTTGGTAGTGTATCTCTCTTCTTAATGGCTGTCCAGCTAATAAGAATGGTCAGGATCAAAGCCATATGATGATCTACTGAACTTTAGCATGAGGATATGGTGCAACATTCTGGATCTTTTCAACCTATACTGGTGCTTTCCAGCCGGCACTCAGTACTCATTCAAATTTTAATAACTCGTCTCAGCTTCAAAAGGAAGTCTAAATTATCGCGGATGAACATATTTTCAGCATAAATTTTGGATCTTTAGTTACAGTTCCTAAGAACTACTGAGAACGTTGCAATTTTCCCAGCTTTTTTCAAAGATGTTCCTTGCATATAAAGATTTTTAATCGATTCTCTTCATTTATTCAAATAAATTGGAGAAATCTTTTGTAATCTCATTTGGTTTTTGTTGAGGGTTGGATGTCTTATCTGTCATCACACTTTTCCTAGGTTTAGACTATTGTGGTAGAGTGATCATTTTTCCTTCATGAATTAAAACAAGGCAGTTTTTGGGTTCTTCCTTGAACCGCATTATGGTAGATTGTTCATTTTTCTTTTATTTTTTTCCCATTTAACTGACTTTGTTACTCGGCAAAATTATCTATAATGATTTGAAATTGTTCTTCCTGTAGATATTGTTGGCTCAGCTATTGGGTTTGCTATTTTCATGGCCATTATCTCCTCTTGGGCCTTGACATTTTCCATTGGAGGAGAACGCCTCTTTGGACCCGTGTGGAACAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAATTTTGATCTTGTTGTATATTTCAAAATGCGCAACTCTCTCCTGTCATTCTTTTCTCCAAAGATCAAAGTTGAAGCTTTTGGGTTTACTTCTCCAAGTACTTCAAGGTTCAAACATAAACCTAGACACATGCTCATTTCAGAGCTCCCCCCCATAAGTAACAAAAGGAATCTCAGATCTAAGCACAATCAACATGAAATTTTTTGAGTTCAACATACATAAATGGTTTAAAGCACACTTGAAATCACATCGTCAAGTTTGAATTGGATCTTGTTCAGCTGCATTACTGAGATTTGTGGATTCAATACCAAACTGATTCTCTTTATTTTTCCTCTGCATCCCTTTTCTCCTTTCAATACTATAAACTGCGCCCTCTTTTCTGGTTCCCTTAGATCATTCATTTATCTGGTGGAAAACATCTTGATGTTAGAAACTTTGTTAAAATTCTTTAGAAGGAACTGTGTAGAAGGCGTCAAGTAGCACAAAAACTAGGTAGAATTGTGAACTAAGATGTGATTAAGAGAAGAAAAAAAAAAGGCAGTGGGAGATTTTATTAGGATATTGTTCATATCTGTCACAGTTGATTCAGCGTATCAGATAGCATTGAAAGAAGTTTGTTTTCATATGCTACCTTTGGATAATTGGCTCTATC TATCTCCGAGTCATTGAAGTCTGCAATGGAGAGCTCGCCGAATCCGAACACAAACCCAAACTCTAACCCCACTCGAATCCAGAATCCCGTATCGTCACAGATTGCTGCGTTATGGCCGACCATTGATGGTTCACTGGGGTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGCGATTCTCACTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATTGGGTTTGCTATTTTCATGGCCATTATCTCCTCTTGGGCCTTGACATTTTCCATTGGAGGAGAACGCCTCTTTGGACCCGTGTGGAACAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAATTTTGATCTTGTTGTATATTTCAAAATGCGCAACTCTCTCCTGTCATTCTTTTCTCCAAAGATCAAAGTTGAAGCTTTTGGGTTTACTTCTCCAAGTACTTCAAGGTTCAAACATAAACCTAGACACATGCTCATTTCAGAGCTCCCCCCCATAAGTAACAAAAGGAATCTCAGATCTAAGCACAATCAACATGAAATTTTTTGAGTTCAACATACATAAATGGTTTAAAGCACACTTGAAATCACATCGTCAAGTTTGAATTGGATCTTGTTCAGCTGCATTACTGAGATTTGTGGATTCAATACCAAACTGATTCTCTTTATTTTTCCTCTGCATCCCTTTTCTCCTTTCAATACTATAAACTGCGCCCTCTTTTCTGGTTCCCTTAGATCATTCATTTATCTGGTGGAAAACATCTTGATGTTAGAAACTTTGTTAAAATTCTTTAGAAGGAACTGTGTAGAAGGCGTCAAGTAGCACAAAAACTAGGTAGAATTGTGAACTAAGATGTGATTAAGAGAAGAAAAAAAAAAGGCAGTGGGAGATTTTATTAGGATATTGTTCATATCTGTCACAGTTGATTCAGCGTATCAGATAGCATTGAAAGAAGTTTGTTTTCATATGCTACCTTTGGATAATTGGCTCTATC ATGGAGAGCTCGCCGAATCCGAACACAAACCCAAACTCTAACCCCACTCGAATCCAGAATCCCGTATCGTCACAGATTGCTGCGTTATGGCCGACCATTGATGGTTCACTGGGGTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGATTCTATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGCGATTCTCACTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATTGGGTTTGCTATTTTCATGGCCATTATCTCCTCTTGGGCCTTGACATTTTCCATTGGAGGAGAACGCCTCTTTGGACCCGTGTGGAACAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAA MESSPNPNTNPNSNPTRIQNPVSSQIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAIFMAIISSWALTFSIGGERLFGPVWNKLVMYNLADKLGLTGWS Homology
BLAST of Cp4.1LG05g10540 vs. ExPASy Swiss-Prot
Match: Q9FY84 (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09310 PE=2 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.0e-48 Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy Swiss-Prot
Match: Q5G235 (Gamma-secretase subunit PEN-2 OS=Bos taurus OX=9913 GN=PSENEN PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08 Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy Swiss-Prot
Match: Q9NZ42 (Gamma-secretase subunit PEN-2 OS=Homo sapiens OX=9606 GN=PSENEN PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-08 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy Swiss-Prot
Match: Q9CQR7 (Gamma-secretase subunit PEN-2 OS=Mus musculus OX=10090 GN=Psenen PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.8e-08 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy Swiss-Prot
Match: Q6QI68 (Gamma-secretase subunit PEN-2 OS=Rattus norvegicus OX=10116 GN=Psenen PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07 Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. NCBI nr
Match: XP_023532347.1 (probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284 bits (726), Expect = 1.33e-96 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. NCBI nr
Match: XP_022946973.1 (probable gamma-secretase subunit PEN-2 [Cucurbita moschata] >KAG7035284.1 putative gamma-secretase subunit PEN-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 276 bits (707), Expect = 1.05e-93 Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. NCBI nr
Match: XP_023007265.1 (probable gamma-secretase subunit PEN-2 [Cucurbita maxima]) HSP 1 Score: 270 bits (690), Expect = 4.13e-91 Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. NCBI nr
Match: KAG6605326.1 (putative gamma-secretase subunit PEN-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268 bits (686), Expect = 2.28e-90 Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. NCBI nr
Match: XP_022931973.1 (probable gamma-secretase subunit PEN-2 [Cucurbita moschata]) HSP 1 Score: 252 bits (644), Expect = 4.14e-84 Identity = 125/138 (90.58%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy TrEMBL
Match: A0A6J1G5B2 (probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC111450992 PE=3 SV=1) HSP 1 Score: 276 bits (707), Expect = 5.10e-94 Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy TrEMBL
Match: A0A6J1L2H7 (probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC111499803 PE=3 SV=1) HSP 1 Score: 270 bits (690), Expect = 2.00e-91 Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy TrEMBL
Match: A0A6J1F097 (probable gamma-secretase subunit PEN-2 OS=Cucurbita moschata OX=3662 GN=LOC111438306 PE=3 SV=1) HSP 1 Score: 252 bits (644), Expect = 2.00e-84 Identity = 125/138 (90.58%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy TrEMBL
Match: A0A6J1I943 (probable gamma-secretase subunit PEN-2 OS=Cucurbita maxima OX=3661 GN=LOC111470312 PE=3 SV=1) HSP 1 Score: 245 bits (626), Expect = 1.11e-81 Identity = 123/138 (89.13%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. ExPASy TrEMBL
Match: A0A6J1DR09 (probable gamma-secretase subunit PEN-2 OS=Momordica charantia OX=3673 GN=LOC111023529 PE=3 SV=1) HSP 1 Score: 242 bits (618), Expect = 1.46e-80 Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of Cp4.1LG05g10540 vs. TAIR 10
Match: AT5G09310.1 (CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 194.1 bits (492), Expect = 7.3e-50 Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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