Homology
BLAST of Cp4.1LG05g10480 vs. ExPASy Swiss-Prot
Match:
B2RS91 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus OX=10090 GN=Rrn3 PE=1 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 2.7e-35
Identity = 144/519 (27.75%), Postives = 231/519 (44.51%), Query Frame = 0
Query: 85 ESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYYKDLLK 144
E L+ I ++ + V++ + + +L + ++ CL M+ ++F+PP ++
Sbjct: 105 EQLINIILRLPWLNRSQRVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPR----VIV 164
Query: 145 KPHGLIRKDE---------VFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLT 204
K G+ D +F H AL+ I+ VP P L I+V K V E
Sbjct: 165 KEGGIDVSDSDDEDDNLPAIFDTCHRALQIITRYVPSTPWFLMPILVEKFPFVRKSERTL 224
Query: 205 SVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFS 264
YV N+LR+ + R+IL +++KLL LDV + DI D +
Sbjct: 225 ECYVHNLLRI--SLYFPTLRREILELVIEKLLKLDVSVSRQDIEDAEEKAAQTCGGTDTT 284
Query: 265 KGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES-CER 324
+G+F + D+DE TD + E P++++ + AE LD L+ L ++E C
Sbjct: 285 EGLFNM---DEDEDTDPEKKADQEQPNQMAHPT------AERLDVLLCLLLSYIEDVCRV 344
Query: 325 DGRLN-----EVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMF 384
G+++ +++ L+ F + +L + S QF +F+ C+ A F L
Sbjct: 345 HGKIDNNKTKDLYRDLISIFDKLLLPTHASCHVQFFMFFLCSFKLGFAEA-FLEHLWKKL 404
Query: 385 ISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKA-- 444
N+P + R +A +Y+ S+L+R KF+ V T L LV+W Y Q D KA
Sbjct: 405 QDPNNPAIIRQAAANYIGSFLARAKFIPLITVKTCLDLLVNWLHMYLTNQ--DSGTKAFC 464
Query: 445 ----HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPILTHRLGPLKVCLPS 504
H FYS CQA+ Y + FR + +L + + L + I+ +L PLK+CLP
Sbjct: 465 DVALHGPFYSACQAVFYTVVFRHKQLLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQ 524
Query: 505 IVEEFLRKANDANLFTPSETFIFNG-LLESEYSKTFGG------MERLDMFFPFDPCLLK 553
+V F N L N + T GG LD FFPFDPC+LK
Sbjct: 525 VVNFFAAITNKYQLVFCYTIMERNSRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLK 584
BLAST of Cp4.1LG05g10480 vs. ExPASy Swiss-Prot
Match:
Q5R4N9 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii OX=9601 GN=RRN3 PE=2 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.0e-31
Identity = 143/516 (27.71%), Postives = 225/516 (43.60%), Query Frame = 0
Query: 85 ESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYY----- 144
E L++ I ++ W V++ + + +L + ++ CL M+ ++F+PP
Sbjct: 107 EQLISIILRLP-WLKSQTVVEEYLAFLANLVSAQTVFLRPCLGMIASHFVPPRVIIKEGD 166
Query: 145 KDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTSVYV 204
D+ F H AL+ I+ VP P L I+V K V E YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226
Query: 205 ENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFSKGIF 264
N+LR+ + +IL +++KLL LDV DI D ++G+F
Sbjct: 227 HNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQDIEDAEETATQTCGGTDSTEGLF 286
Query: 265 EIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES-CERDGRL 324
+ D+DE T+ E + R + +AE LD L+ L +++ C DG++
Sbjct: 287 NM---DEDEETEH------ETKAGPERLDQMVHPVAECLDILMSLVLSYMKDVCYVDGQV 346
Query: 325 N-----EVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCN 384
+ +++ L+ F + +L+ + S QF +FY C+ A F L +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLSTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406
Query: 385 DPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKA------ 444
+P + R +A +Y+ S+L+R KF+ V + L LV+W Y Q D KA
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVRSCLDLLVNWLHIYLNNQ--DSGTKAFCDVAL 466
Query: 445 HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMP---IGPILTHRLGPLKVCLPSIVE 504
H FYS CQA+ Y FR + +L LK L + I+ +L PLK+CLPS+V
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLS-GNLKEGLRYLQSLNFEWIVMSQLNPLKICLPSVVN 526
Query: 505 EFLRKANDANL-FTPSETFIFNGLLESEYSKTFGG------MERLDMFFPFDPCLLKRCD 553
F N L F + N + T GG LD FFPFDPC+LKR
Sbjct: 527 FFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSK 586
BLAST of Cp4.1LG05g10480 vs. ExPASy Swiss-Prot
Match:
Q10110 (RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrn3 PE=3 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.4e-31
Identity = 147/580 (25.34%), Postives = 251/580 (43.28%), Query Frame = 0
Query: 28 FIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPDEVAL-LVTCLKALCGAVSFIDNALHES 87
F+ L + GN GY L + +L L L AL VS +D++ + S
Sbjct: 57 FVNKALDDKAEGNFAGYEDLRRQFAAKSDTKDAPSSLQLQNLLSALTCNVSRLDSS-NSS 116
Query: 88 LLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYYKDLLKKP 147
L+ + + + + +L + Y+ + ML+
Sbjct: 117 LVMSVLDSVWVSRDESFVRCYTRFLGNLISAQSNYLPLVMTMLIQ--------------- 176
Query: 148 HGLIRKDEV---FSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTS--VYVEN 207
H L R D + + H ALK + +LVP A L ++ + + ESL + Y+ N
Sbjct: 177 HMLYRPDSLAIHYEHAHMALKYVLELVPRAHSFLYSSILEEFP--YKDESLLAQMTYISN 236
Query: 208 MLRLEKGSLSEFVGR---KILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDDDE- 267
+L S+ E+V +L A++DK++ +DVEI ++E++DDDE
Sbjct: 237 VL-----SICEYVPSIKGPVLHAIIDKIIQIDVEI---------------QVEVDDDDEE 296
Query: 268 ----ITDD---------------INEDFIELPSELSRKS-LTGNVIAET------LDSLI 327
+TDD + E + SE++ + LT + +T LD L+
Sbjct: 297 EDEVVTDDDGTSNADSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQLDQLL 356
Query: 328 VLTFEHLE----SCERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCG 387
F +L+ S RD L V+ L+ SF TVL ++ ++ QF+IF+A LDPE
Sbjct: 357 YTLFSYLDSNLKSTSRDRYL--VYNSLIKSFVNTVLKTFRCRYTQFLIFWASQLDPEFTD 416
Query: 388 ARFAVTLADMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKT 447
F L ++ + + P R+S Y+ SY++R K L + + I+ + W Y
Sbjct: 417 I-FLGVLTEVCLDPSQPYTLRLSGAMYIGSYVARAKALEKNTIQIIVNMMTRWVEAYLDQ 476
Query: 448 QHVDLNP---KAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLL--------LMPIGPI 507
+L+ H VFY+ Q+I Y+ CFR R + +S L +
Sbjct: 477 CENELSDDLLSKHSVFYAINQSIFYIFCFRWRELCVSDESESMEPRPNEWIPGLEILHRS 536
Query: 508 LTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFP 557
+ RL PL+ C P+IV +F + AN N ++++ + ++ G + +D +FP
Sbjct: 537 VLSRLNPLRYCSPNIVLQFAKVANHLNFM-----YVYSIIEQNRKGIFREGFDTMDAYFP 590
BLAST of Cp4.1LG05g10480 vs. ExPASy Swiss-Prot
Match:
Q9NYV6 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens OX=9606 GN=RRN3 PE=1 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 4.0e-31
Identity = 140/515 (27.18%), Postives = 225/515 (43.69%), Query Frame = 0
Query: 85 ESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYY----- 144
E L++ I ++ + V++ + + +L + ++ CL M+ ++F+PP
Sbjct: 107 EQLISIILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGD 166
Query: 145 KDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTSVYV 204
D+ F H AL+ I+ VP P L I+V K V E YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226
Query: 205 ENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEI---GWDDILQ--------DDFSKGIF 264
N+LR+ + +IL +++KLL LDV G +D + D ++G+F
Sbjct: 227 HNLLRI--SVYFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLF 286
Query: 265 EIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES-CERDGRL 324
+ D+DE T+ E + R + +AE LD L+ L +++ C DG++
Sbjct: 287 NM---DEDEETEH------ETKAGPERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKV 346
Query: 325 N-----EVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCN 384
+ +++ L+ F + +L + S QF +FY C+ A F L +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406
Query: 385 DPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKA------ 444
+P + R +A +Y+ S+L+R KF+ V + L LV+W Y Q D KA
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIYLNNQ--DSGTKAFCDVAL 466
Query: 445 HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEE 504
H FYS CQA+ Y FR + +L + L + I+ +L PLK+CLPS+V
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNF 526
Query: 505 FLRKANDANL-FTPSETFIFNGLLESEYSKTFGG------MERLDMFFPFDPCLLKRCDR 553
F N L F + N + T GG LD FFPFDPC+LKR +
Sbjct: 527 FAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKK 586
BLAST of Cp4.1LG05g10480 vs. ExPASy Swiss-Prot
Match:
P36070 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRN3 PE=1 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 1.9e-17
Identity = 99/426 (23.24%), Postives = 178/426 (41.78%), Query Frame = 0
Query: 198 YVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWD-DILQDDF-SKGIFEIELEDD 257
Y N+L+L +G SE +G +I + L++K++ +DVE+ + D L DD + E++LEDD
Sbjct: 211 YTSNLLKL-RGYCSE-LGFQIWSLLIEKIISIDVELQNELDELDDDVDDDDLEEVDLEDD 270
Query: 258 DEITDDINEDFIELPSELSRKSLTG------------------------NV--------I 317
D++ DD +D E + + +G NV +
Sbjct: 271 DDLDDDSGDDDDENCGNSNEELRSGAADGSQSDSEDMDIIEGMDGTEEYNVELTQGIKEL 330
Query: 318 AETLDSLIVLTFEHLESCERDGRLNE-----VFEILLLSFQRTVLTAYKSKFAQFVIFYA 377
+ LDS++ L H+E L VF L F+ VL Y ++ Q+++F+
Sbjct: 331 STKLDSILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHV 390
Query: 378 CALDPEVCGARFAVTLADMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLV 437
E+ + F VTL D+ + N+ ++ ++ YL SY++R K LS + + + L
Sbjct: 391 SQQQLELMDS-FLVTLIDISFAVNEAAEKKIKSLQYLGSYIARAKKLSRTQIIFVASYLT 450
Query: 438 DWCLEYGKTQHVDLNPKA----HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG 497
W Y + +++ + K FY+ QA+ Y+ CFR + L
Sbjct: 451 SWLNRYVIEREEEVDQRGGMERFKHFYAAFQALCYIFCFRHNIFRDTDGNWECELDKFFQ 510
Query: 498 PILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFNGLLESEYSKTFGGM------ 551
++ + PLK C +++ F R A S + F+ ++E+ ++ G+
Sbjct: 511 RMVISKFNPLKFCNENVMLMFARIAQQ-----ESVAYCFS-IIENNNNERLRGIIGKADS 570
BLAST of Cp4.1LG05g10480 vs. NCBI nr
Match:
XP_023533554.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1243 bits (3216), Expect = 0.0
Identity = 630/630 (100.00%), Postives = 630/630 (100.00%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS
Sbjct: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
ITPRNSILYRRDSVQMPSRILPSTSPGSLW
Sbjct: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
BLAST of Cp4.1LG05g10480 vs. NCBI nr
Match:
XP_022947606.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita moschata])
HSP 1 Score: 1219 bits (3153), Expect = 0.0
Identity = 621/630 (98.57%), Postives = 623/630 (98.89%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDDDEITDDINED IELPSELSRKSLTGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDDEITDDINEDSIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGK+QHVDLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKSQHVDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
PSYDEEEDD+ EGSSDEDVAEVFPDRIEENLMD EAMARSYDDREFDLDEFDSALNKMS
Sbjct: 541 PSYDEEEDDN--EGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
ITPRNSI YRRDSVQMPSRILPSTSPGS W
Sbjct: 601 ITPRNSIQYRRDSVQMPSRILPSTSPGSWW 628
BLAST of Cp4.1LG05g10480 vs. NCBI nr
Match:
XP_023007143.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita maxima])
HSP 1 Score: 1205 bits (3118), Expect = 0.0
Identity = 615/630 (97.62%), Postives = 618/630 (98.10%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKALCGAVSFIDN LHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALCGAVSFIDNVLHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPPHYY DLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPHYYMDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VVNKMQRVFFKES+T+VYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVNKMQRVFFKESMTTVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDDDEITD INED IELPSELSRKSLTGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDDEITDAINEDSIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEY KTQHVDLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYSKTQHVDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG ILTHRLGPLKVCLPSIVEEFLRKAN
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGSILTHRLGPLKVCLPSIVEEFLRKAN 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
ANLFTPSETFIFNGLLESEYSKTFGG ERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 -ANLFTPSETFIFNGLLESEYSKTFGGTERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
PSYDEE+DDDDDEGSSDEDVAEVFPDRIEENLMD EAMARSYDDREFDLDEFDSALNKMS
Sbjct: 541 PSYDEEDDDDDDEGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
ITPRNSI YR DSVQMPSRILPSTSPGSLW
Sbjct: 601 ITPRNSIQYRGDSVQMPSRILPSTSPGSLW 629
BLAST of Cp4.1LG05g10480 vs. NCBI nr
Match:
KAG6605341.1 (RNA polymerase I-specific transcription initiation factor RRN3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1197 bits (3097), Expect = 0.0
Identity = 610/617 (98.87%), Postives = 612/617 (99.19%), Query Frame = 0
Query: 15 MEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPDEVALLVTCLKALCG 74
MEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPDEVALLVTCLKALCG
Sbjct: 1 MEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPDEVALLVTCLKALCG 60
Query: 75 AVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFM 134
AVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFM
Sbjct: 61 AVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFM 120
Query: 135 PPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESL 194
PPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESL
Sbjct: 121 PPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESL 180
Query: 195 TSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELED 254
TSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELED
Sbjct: 181 TSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELED 240
Query: 255 DDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEIL 314
DDEITDDINED IELPSELSRKSLTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEIL
Sbjct: 241 DDEITDDINEDSIELPSELSRKSLTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEIL 300
Query: 315 LLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCNDPPLTRMSAVSY 374
LLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCNDPPLTRMSAVSY
Sbjct: 301 LLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCNDPPLTRMSAVSY 360
Query: 375 LASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVLCFR 434
LASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVLCFR
Sbjct: 361 LASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVLCFR 420
Query: 435 MRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFN 494
MRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFN
Sbjct: 421 MRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFN 480
Query: 495 GLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDDE- 554
GLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDD+
Sbjct: 481 GLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDDDD 540
Query: 555 GSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMSITPRNSILYRRDS 614
GSSDEDVAEVFPDRIEENLMD +AMARSYDDREFDLDEFDSALNKMSITPRNSI YRRDS
Sbjct: 541 GSSDEDVAEVFPDRIEENLMDDKAMARSYDDREFDLDEFDSALNKMSITPRNSIQYRRDS 600
Query: 615 VQMPSRILPSTSPGSLW 630
VQMPSRILPSTSPGSLW
Sbjct: 601 VQMPSRILPSTSPGSLW 617
BLAST of Cp4.1LG05g10480 vs. NCBI nr
Match:
KAG7035298.1 (RNA polymerase I-specific transcription initiation factor RRN3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1188 bits (3073), Expect = 0.0
Identity = 617/654 (94.34%), Postives = 618/654 (94.50%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAG-----------------------IFKMSLW 120
EVALLVTCLKALCGAVSFIDNALHESLLAG IFKMSLW
Sbjct: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGVSLSLNSVSVSCNFVVVMEVLFQIFKMSLW 120
Query: 121 DYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFS 180
DYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFS
Sbjct: 121 DYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFS 180
Query: 181 RVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRK 240
RVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRK 240
Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKS 300
ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDDDEITDDINED IELPSELSRKS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDDDEITDDINEDSIELPSELSRKS 300
Query: 301 LTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFY 360
LTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFY
Sbjct: 301 LTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFY 360
Query: 361 ACALDPEVCGARFAVTLADMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRL 420
ACALDPEVCGARFAV LADMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRL
Sbjct: 361 ACALDPEVCGARFAVMLADMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRL 420
Query: 421 VDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPIL 480
VDWCLEYGKTQHVDLNPKAHK AIMYVLCFRMRSILEIPRLKSQLLLMPIGPIL
Sbjct: 421 VDWCLEYGKTQHVDLNPKAHK-------AIMYVLCFRMRSILEIPRLKSQLLLMPIGPIL 480
Query: 481 THRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPF 540
THRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPF
Sbjct: 481 THRLGPLKVCLPSIVEEFLRKANDANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPF 540
Query: 541 DPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDDE-GSSDEDVAEVFPDRIEENLMDGE 600
DPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDD+ GSSDEDVAEVFPDRIEENLMD E
Sbjct: 541 DPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDDDDGSSDEDVAEVFPDRIEENLMDDE 600
Query: 601 AMARSYDDREFDLDEFDSALNKMSITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
AMARSYDDREFDLDEFDSALNKMSITPRNSI YRRDSVQMPSRILPSTSPGSLW
Sbjct: 601 AMARSYDDREFDLDEFDSALNKMSITPRNSIQYRRDSVQMPSRILPSTSPGSLW 647
BLAST of Cp4.1LG05g10480 vs. ExPASy TrEMBL
Match:
A0A6J1G6X0 (RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita moschata OX=3662 GN=LOC111451422 PE=3 SV=1)
HSP 1 Score: 1219 bits (3153), Expect = 0.0
Identity = 621/630 (98.57%), Postives = 623/630 (98.89%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDDDEITDDINED IELPSELSRKSLTGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDDEITDDINEDSIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGK+QHVDLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKSQHVDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
PSYDEEEDD+ EGSSDEDVAEVFPDRIEENLMD EAMARSYDDREFDLDEFDSALNKMS
Sbjct: 541 PSYDEEEDDN--EGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
ITPRNSI YRRDSVQMPSRILPSTSPGS W
Sbjct: 601 ITPRNSIQYRRDSVQMPSRILPSTSPGSWW 628
BLAST of Cp4.1LG05g10480 vs. ExPASy TrEMBL
Match:
A0A6J1L6W4 (RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita maxima OX=3661 GN=LOC111499725 PE=3 SV=1)
HSP 1 Score: 1205 bits (3118), Expect = 0.0
Identity = 615/630 (97.62%), Postives = 618/630 (98.10%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFL SVSLGNTDGYNQLVGVIHHRERLSPD
Sbjct: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLSSVSLGNTDGYNQLVGVIHHRERLSPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKALCGAVSFIDN LHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALCGAVSFIDNVLHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPPHYY DLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPHYYMDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VVNKMQRVFFKES+T+VYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVNKMQRVFFKESMTTVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDDDEITD INED IELPSELSRKSLTGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDDEITDAINEDSIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEY KTQHVDLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYSKTQHVDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG ILTHRLGPLKVCLPSIVEEFLRKAN
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGSILTHRLGPLKVCLPSIVEEFLRKAN 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
ANLFTPSETFIFNGLLESEYSKTFGG ERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 -ANLFTPSETFIFNGLLESEYSKTFGGTERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
PSYDEE+DDDDDEGSSDEDVAEVFPDRIEENLMD EAMARSYDDREFDLDEFDSALNKMS
Sbjct: 541 PSYDEEDDDDDDEGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSLW 630
ITPRNSI YR DSVQMPSRILPSTSPGSLW
Sbjct: 601 ITPRNSIQYRGDSVQMPSRILPSTSPGSLW 629
BLAST of Cp4.1LG05g10480 vs. ExPASy TrEMBL
Match:
A0A6J1F0A3 (RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438313 PE=3 SV=1)
HSP 1 Score: 1100 bits (2846), Expect = 0.0
Identity = 563/629 (89.51%), Postives = 591/629 (93.96%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MG+ELENGQAQFQDMEGVNFTD QLVDFIRGFL SVSLGNTDGY+QLVGVIHHR RLS D
Sbjct: 1 MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRGRLSAD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKAL GAVS ID LHESLLA IFKMSLWDYGPNVMDAL+ELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLV NFMPPH YKD LKKPHGL RKDEV SRVHTALKDISDLVPLAPLRLE I
Sbjct: 121 YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VV+KMQRVFFKESLT++YVENMLRLEKG++SEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDD+E TDDI+ED ELP ELSRKSL GNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRL+EVF+ILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMF+S
Sbjct: 301 CERDGRLSEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFVS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CN PLTRMSA+SYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKT VDLNPKAHK+F
Sbjct: 361 CNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG ILTHRL PLKVCLPSIVEEFLR+A
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
ANLFTPSETFIFNGLLESEYSKTFGG+ERLDMFFP+DPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
P+YDEEE+D EGSSDEDVAEVFPD+IEENLMD EAMA SYD+REFDLDEFD+AL+KMS
Sbjct: 541 PTYDEEEED---EGSSDEDVAEVFPDKIEENLMDDEAMATSYDNREFDLDEFDNALDKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSL 629
ITPRNS+ +R+D V+MPSRI PS SP SL
Sbjct: 601 ITPRNSLPFRQDCVRMPSRIRPSMSPESL 626
BLAST of Cp4.1LG05g10480 vs. ExPASy TrEMBL
Match:
A0A6J1IFT9 (RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita maxima OX=3661 GN=LOC111472381 PE=3 SV=1)
HSP 1 Score: 1097 bits (2837), Expect = 0.0
Identity = 564/629 (89.67%), Postives = 589/629 (93.64%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MG+E ENGQAQFQDMEGVNFTD QLVDFIRGFL SVSLGNTDGY+QLVGVIHHR+RLS D
Sbjct: 1 MGVEFENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRDRLSAD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVTCLKAL GAVS ID LHESLLA IFKMSLWDYGPNVMDAL+ELITSLAVSSGK
Sbjct: 61 EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLV NFMPPH YKD LKKPHGL RKDEV SRVHTALKDISDLVPLAPLRLE I
Sbjct: 121 YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VV+KMQRVFFKESLT++YVENMLRLEKG++SEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFEIELEDD+E TDDI+ED ELP ELSRKSL GNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CERDGRLNEVF+ILLLSFQRTVLTAYKSKFAQFVIFYACALD EVCGARFAVTLADMFIS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDLEVCGARFAVTLADMFIS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
N PLTRMSA+SYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKT VDLNPKAHK+F
Sbjct: 361 RNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIG ILTHRL PLKVCLPSIVEEFLR+A
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
ANLFTPSETFIFNGLLESEYSKTFGG+ERLDMFFP+DPCLLKRCDRYLRPYFVYWSMVR
Sbjct: 481 VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
P+YDEEE+D EGSSDEDVAEVFPD+IEENLMD EAMARSYDDREFDLDEFD+AL+KMS
Sbjct: 541 PTYDEEEED---EGSSDEDVAEVFPDKIEENLMDDEAMARSYDDREFDLDEFDNALDKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSL 629
ITPRNS+ R+D V+MPSRI PS SP SL
Sbjct: 601 ITPRNSLPLRQDCVRMPSRIRPSMSPESL 626
BLAST of Cp4.1LG05g10480 vs. ExPASy TrEMBL
Match:
A0A6J1D5F0 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Momordica charantia OX=3673 GN=LOC111017473 PE=3 SV=1)
HSP 1 Score: 1074 bits (2778), Expect = 0.0
Identity = 544/629 (86.49%), Postives = 583/629 (92.69%), Query Frame = 0
Query: 1 MGMELENGQAQFQDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPD 60
MG+EL NGQAQFQDME VNFTD+QL+D+++G L SVSLGN+D YNQLV VIHHR L+PD
Sbjct: 1 MGVELANGQAQFQDMEDVNFTDAQLLDYMKGTLSSVSLGNSDRYNQLVSVIHHRSHLAPD 60
Query: 61 EVALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGK 120
EVALLVT LK L GAVS+ID LHESLLA IFKM+LWDYGP+VMDAL+ELI SLAVSSGK
Sbjct: 61 EVALLVTSLKVLSGAVSYIDIVLHESLLAAIFKMNLWDYGPDVMDALIELIISLAVSSGK 120
Query: 121 YVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQI 180
YVDSCLDMLVNNFMPP+ + D LK+P GL +KDEV SRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVDSCLDMLVNNFMPPNSFVDFLKQPRGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
Query: 181 VVNKMQRVFFKESLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
VV KMQRVFFKESLT++YVENMLRLEK ++SEFVGRKILTAL+DKLLDLDVEIGWDDILQ
Sbjct: 181 VVQKMQRVFFKESLTTIYVENMLRLEKSAMSEFVGRKILTALIDKLLDLDVEIGWDDILQ 240
Query: 241 DDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLES 300
DDFSKGIFE+ELEDDDEITDDINED +E P ELSRKSL GNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDEITDDINEDSVEFPRELSRKSLCGNVIAETLDSLIVLTFEHLES 300
Query: 301 CERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFIS 360
CE GRLNEVF+ILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMF+S
Sbjct: 301 CELGGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFVS 360
Query: 361 CNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVF 420
CNDPPLTRMSA+SYLASYLSRGKFLSTSLVTTILKRLVDWCLEY KT+ DLNPKAHKVF
Sbjct: 361 CNDPPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYCKTRDGDLNPKAHKVF 420
Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKAN 480
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGP+LTHRL PLKVCLPSIVEEFLR+A
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPVLTHRLNPLKVCLPSIVEEFLRQAK 480
Query: 481 DANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVR 540
ANLFTPSETF+FNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRP+FVYWSMVR
Sbjct: 481 VANLFTPSETFVFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPHFVYWSMVR 540
Query: 541 PSYDEEEDDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMS 600
P+YDE+E+D EGSSDEDVAEVFPDRIEENLMD EAMARSY +++FD+D FDSALNKMS
Sbjct: 541 PTYDEDEED---EGSSDEDVAEVFPDRIEENLMDDEAMARSYGEQDFDIDAFDSALNKMS 600
Query: 601 ITPRNSILYRRDSVQMPSRILPSTSPGSL 629
ITPRNS+ YRRD VQMPSRI PS SP SL
Sbjct: 601 ITPRNSLQYRRDHVQMPSRIRPSMSPESL 626
BLAST of Cp4.1LG05g10480 vs. TAIR 10
Match:
AT2G34750.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )
HSP 1 Score: 577.0 bits (1486), Expect = 1.8e-164
Identity = 316/621 (50.89%), Postives = 430/621 (69.24%), Query Frame = 0
Query: 15 MEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHH--RERLSPDEVALLVTCLKAL 74
++ V+ +D+QLV +R L SV G++D Y+++VGV+ +E PD VA L T LKAL
Sbjct: 20 VDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLKAL 79
Query: 75 CGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNN 134
GAV+ ID H+ LL+ +F+M LWD+ P+VMDALV L+ SLAV+SGKY+DSCL+MLV+N
Sbjct: 80 SGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSN 139
Query: 135 FMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKE 194
F+PP + + L L +K +V SRVH AL IS LVPL P RL ++ +M ++ K+
Sbjct: 140 FVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSRLVPMLFQQMPKMHKKD 199
Query: 195 SLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIEL 254
+YVE++L+LE S+ + G IL ++++L DLD+EI WDDI QDD S+G+F++EL
Sbjct: 200 HSIVIYVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEIEWDDIPQDDSSRGMFDMEL 259
Query: 255 EDDDEITDDINEDFIELP-SELSRKSLTGNVIAETLDSLIVLTFEHLESCERDGRLNEVF 314
ED E T D ELP L + + G+++++ LD L+V+ FEHLESC+ DGRL++VF
Sbjct: 260 EDAAEGT---MNDGDELPVGPLKQDTSDGSIVSKLLDKLMVVAFEHLESCQNDGRLDQVF 319
Query: 315 EILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCNDPPLTRMSA 374
E L SF+ +L YKSKF QF+IFYAC+LDPE CG +FA L ++F+S N TRMSA
Sbjct: 320 ESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFASKLVEIFLSSNKHVATRMSA 379
Query: 375 VSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVL 434
V+YLAS+L+RGKFL S V ++LKRL+D C+ Y +T + D P+AH++F+SGCQAIMYVL
Sbjct: 380 VAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDTRPEAHQIFFSGCQAIMYVL 439
Query: 435 CFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETF 494
CFRMRSIL++PR +SQ L P+ IL H+L PL VCLPS+V EFLR+A + LF S++F
Sbjct: 440 CFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVSDSF 499
Query: 495 IFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDD 554
IF+ LLESE S+ FGG ERLD FFPFDPCLLK + ++ P F+YWSMV+ +YDE++DD+D
Sbjct: 500 IFDDLLESELSRAFGGFERLDTFFPFDPCLLKSSNSFISPNFIYWSMVKATYDEDDDDND 559
Query: 555 DEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMSITPRNSI---L 614
AEV + E++ D EA + D ALNKMSITP++S +
Sbjct: 560 ---------AEVIVNGDEDSDEDDEA-------------DLDYALNKMSITPKHSFKNKM 613
Query: 615 YRRDSVQMPSRILPSTSPGSL 630
R ++MPSRI PSTSP SL
Sbjct: 620 ERDRLLRMPSRIRPSTSPESL 613
BLAST of Cp4.1LG05g10480 vs. TAIR 10
Match:
AT1G30590.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )
HSP 1 Score: 510.4 bits (1313), Expect = 2.1e-144
Identity = 296/615 (48.13%), Postives = 399/615 (64.88%), Query Frame = 0
Query: 15 MEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPDEVALLVTCLKALCG 74
M+ +TD+ LV +R L SV G+TD Y+QL V+ E D VA L T LK+L
Sbjct: 16 MDNAEYTDTDLVFAVRKALASVQNGDTDDYSQLKTVMCLTEDADFDAVAQLETVLKSLSV 75
Query: 75 AVSFIDNALHESLLAGIFKMSLW--DYGPNVMDALVELITSLAVSSGKYVDSCLDMLVNN 134
+V++ID H+ LL MSLW + P+VMDALV+LI SLA +SGKY+D CL+MLV N
Sbjct: 76 SVAWIDLVHHKDLLEA---MSLWYHSHRPSVMDALVDLIISLAATSGKYLDPCLNMLVRN 135
Query: 135 FMPPHYYKDLLKKPHGLIRKDEVFSRVHTALKDISDLVPLAPLRLEQIVVNKMQRVFFKE 194
F P +K + + + + EV RVH AL IS L+PLAP L I+ M+++ K+
Sbjct: 136 FSQP-TFKHKVSQTQLVKKMQEVHPRVHAALHKISYLIPLAPWNLVSILAQNMRKIDKKD 195
Query: 195 SLTSVYVENMLRLEKGSLSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIEL 254
YV+N+LRLE S+ E VG IL +++++LDLD+ G DD + G+F++EL
Sbjct: 196 PSIVTYVDNLLRLENSSIGEVVGSVILMMVMERMLDLDLVSGC-----DDSNGGMFDMEL 255
Query: 255 EDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTFEHLESCERDGRLNEVFE 314
ED E T + ++F L + + GNV++E LD L+VL F HLESC+ RL+EVFE
Sbjct: 256 EDAVESTMNEGDEF--PVGALKQNTSGGNVVSELLDKLMVLFFHHLESCQNSDRLDEVFE 315
Query: 315 ILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLADMFISCNDPPLTRMSAV 374
IL SF+ +L YK+KF+QF++FYAC+LDPE CG RFA L D+++S N LTRMSAV
Sbjct: 316 ILFKSFENYILNTYKTKFSQFLMFYACSLDPENCGVRFASKLLDIYLSSNTCRLTRMSAV 375
Query: 375 SYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPKAHKVFYSGCQAIMYVLC 434
+YLASYLSRGKFL S V ++LKRLVD C EY T + D+ P+AH+VFYSGCQAI+YVLC
Sbjct: 376 AYLASYLSRGKFLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGCQAILYVLC 435
Query: 435 FRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEFLRKANDANLFTPSETFI 494
FRMRSI+EIPR +SQ + IL+H+L PL VCLPS+V EFL++A LF SE+FI
Sbjct: 436 FRMRSIVEIPRFQSQ--FRSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSESFI 495
Query: 495 FNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVYWSMVRPSYDEEEDDDDD 554
F+ L ESE S+ FGG ERLD FFPFDPCLLK Y+ P F +WSMV+ +Y E+ D+
Sbjct: 496 FDDLHESELSRAFGGFERLDTFFPFDPCLLKMSSSYISPNFNFWSMVKTTYGEDGDE--- 555
Query: 555 EGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDEFDSALNKMSITPRNSILYRRD 614
+ +E +++G+A + D + +L DS +N MS TP++S + +
Sbjct: 556 -------------ELCDEVIVNGDADSAEEPDDDVEL---DSEMNTMSTTPKHSFMRETE 598
Query: 615 S-VQMPSRILPSTSP 627
++MPSRI PSTSP
Sbjct: 616 RLLKMPSRIRPSTSP 598
BLAST of Cp4.1LG05g10480 vs. TAIR 10
Match:
AT2G39240.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )
HSP 1 Score: 420.6 bits (1080), Expect = 2.2e-117
Identity = 265/636 (41.67%), Postives = 376/636 (59.12%), Query Frame = 0
Query: 13 QDMEGVNFTDSQLVDFIRGFLGSVSLGNTDGYNQLVGVIHHRERLSPDE----------- 72
+++E + +D LV IR L S G+TD YN+LV +++ +++ S D+
Sbjct: 4 EEVETADLSDKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDV 63
Query: 73 --VALLVTCLKALCGAVSFIDNALHESLLAGIFKMSLWDYGPNVMDALVELITSLAVSSG 132
VA T LK L +V+ +D+ H LL I +WD+ PNV+ AL++LI SLA +SG
Sbjct: 64 DVVAQRETLLKILSHSVACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSG 123
Query: 133 KYVDSCLDMLVNNFMPPHYYKDLLKKPHGLIRKD-EVFSRVHTALKDISDLVPLAPLRLE 192
K++ SCLD LV+N L +P L K EV SRVH AL IS LVPLAP L
Sbjct: 124 KHLSSCLDTLVSN---------LRSQPRKLDNKMLEVLSRVHAALHKISYLVPLAPSILL 183
Query: 193 QIVVNKMQRVFFKESLTSV--YVENMLRLEKGS-LSEFVGRKILTALVDKLLDLDVEIGW 252
I+ M V K L V YV+N+L+LE S + + VG+ IL ++ + DLD EI
Sbjct: 184 PILAQSMPSVHDKARLQVVVPYVKNLLKLENSSIIGKVVGKDILMMVMGRFRDLDSEIEC 243
Query: 253 DDILQDDFSKGIFEIELEDDDEITDDINEDFIELPSELSRKSLTGNVIAETLDSLIVLTF 312
DD LQ+D S +F++EL+ ++ G ++++ LD L+V +F
Sbjct: 244 DDNLQNDSSLAMFDMELD----------------------VAVEGTLVSKLLDDLMVESF 303
Query: 313 EHLESCERDGRLNEVFEILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFAVTLA 372
HL+SC+ GRL+EVFE L SF+ +L K KF+QF++FYAC+LDPE CG +FA L
Sbjct: 304 NHLKSCQDAGRLDEVFENLFESFENLILNTQKLKFSQFLMFYACSLDPENCGVKFASKLL 363
Query: 373 DMFISCNDPPLTRMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTQHVDLNPK 432
+ F+S N+ +TR +AV+YLASYL+R FLS S V ++LKRLVD C +Y +T + D P+
Sbjct: 364 EKFLSSNNNQVTRTNAVTYLASYLARANFLSASFVASMLKRLVDECADYCRTCNDDARPE 423
Query: 433 AHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPILTHRLGPLKVCLPSIVEEF 492
H+VFYSGCQAI+YVLCFRMRSILE+P +SQ L P+ +L+H+L PL+VCL S+V EF
Sbjct: 424 VHQVFYSGCQAILYVLCFRMRSILEVPHFQSQ--LTPLESVLSHKLDPLRVCLSSVVSEF 483
Query: 493 LRKANDANLFTPSETFIFNGLLESEYSKTFGGMERLDMFFPFDPCLLKRCDRYLRPYFVY 552
L +A LF S+ FIF+ L ESE S+ GG FFPF P LL++ + + P+F+
Sbjct: 484 LIQAKACGLFIVSDAFIFDDLSESELSRALGG------FFPF-PWLLEKSNSLISPHFIK 543
Query: 553 WSMVRPSYDEEE----DDDDDEGSSDEDVAEVFPDRIEENLMDGEAMARSYDDREFDLDE 612
S V+ +Y++ E D D+E SD+DV +
Sbjct: 544 RSEVKKTYEQAEVTVYGDTDNEEDSDDDV------------------------------D 569
Query: 613 FDSALNKMSITPRNSILYRRDS-VQMPSRILPSTSP 627
D+ +NKMSITP++S+++ + ++MPSRI PSTSP
Sbjct: 604 PDNEMNKMSITPKHSVMHETERLLKMPSRISPSTSP 569
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
B2RS91 | 2.7e-35 | 27.75 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus O... | [more] |
Q5R4N9 | 1.0e-31 | 27.71 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii O... | [more] |
Q10110 | 1.4e-31 | 25.34 | RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharo... | [more] |
Q9NYV6 | 4.0e-31 | 27.18 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens O... | [more] |
P36070 | 1.9e-17 | 23.24 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023533554.1 | 0.0 | 100.00 | RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita p... | [more] |
XP_022947606.1 | 0.0 | 98.57 | RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita m... | [more] |
XP_023007143.1 | 0.0 | 97.62 | RNA polymerase I-specific transcription initiation factor RRN3-like [Cucurbita m... | [more] |
KAG6605341.1 | 0.0 | 98.87 | RNA polymerase I-specific transcription initiation factor RRN3, partial [Cucurbi... | [more] |
KAG7035298.1 | 0.0 | 94.34 | RNA polymerase I-specific transcription initiation factor RRN3, partial [Cucurbi... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G6X0 | 0.0 | 98.57 | RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita... | [more] |
A0A6J1L6W4 | 0.0 | 97.62 | RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita... | [more] |
A0A6J1F0A3 | 0.0 | 89.51 | RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 O... | [more] |
A0A6J1IFT9 | 0.0 | 89.67 | RNA polymerase I-specific transcription initiation factor RRN3-like OS=Cucurbita... | [more] |
A0A6J1D5F0 | 0.0 | 86.49 | RNA polymerase I-specific transcription initiation factor RRN3 OS=Momordica char... | [more] |
Match Name | E-value | Identity | Description | |
AT2G34750.1 | 1.8e-164 | 50.89 | RNA polymerase I specific transcription initiation factor RRN3 protein | [more] |
AT1G30590.1 | 2.1e-144 | 48.13 | RNA polymerase I specific transcription initiation factor RRN3 protein | [more] |
AT2G39240.1 | 2.2e-117 | 41.67 | RNA polymerase I specific transcription initiation factor RRN3 protein | [more] |