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Cp4.1LG05g10450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTATGTATTTGATAACAGTAATCTCGTGAGTCTCGTGAGTGATTGATTTTAAAAGTGATTAGACATGACTCGACTCTTTAAATGTCACCAACCATTATCTAATTCATTTATATCATTGGAGTCGATCATAATAAGCTTTGTATTATACCTCTTATTTCATAGTTTTTAAATTGGAAATTGGTTTGGTAACATAAAATAAATAAACCTTATTGAATAGATAGATCTCGGGTTAGACTTTGAACCGTTCTTTGACCCAGTCGGTGGACGCTATGAGAATTTCAGCTAATTAGAATTTATCCACTCGTAATCGTTTTGTGACAGGATTGAATTTGATATCTTCGTCATTTTCTTCAGTTCCTTACGTCTTTTCCTTCAACCAATTAGGAGTTTGTTCTCAGTTGTAATTGTCATTTGAAGATCAATGATCGCCGCTGGTTTTGTTCGTCAATGTGTTGTCCGTTCCCTAATCATATCGTTCATGAACGTATTCTAGTTATACCGTTATAGGAACTTATTCTAACCATATTGTTTTATCAATCTATCATAATCATGTCTTTTTCTATACATAACCGAATCATATTGTTATCATCAATCATATCTTAGTCATATCCTTACATTACGTTTATCGTATCTTTCTTACGTCCTATTTCACACATATCATTGAACACATTGTAACGTAAGAGTTATCATATCATTCACATATCATAATACATACCTAACATATCATAGTCATATTGGTTCATGAACAATTCACAGATATCAAATTTATGACACGTGCAGAACCACGAAGCACGTGTTAGCATCAAATATAATCATGTCGATAGTAAGGTCACTTACTTGATTAGCTTAAGCTGGTGTCACCAATTTATCCTTAATGAAAGTTTGGTTTTGTAAAAGTTTTAACGAGTAATTCCGCATTCAATGTTCATGATATGTACAGTAGCGTTTTAGCTAAAGTAGAAAATTTAGGGTCGTTACACTACTTGTGTTCTTAGAAGTAGCTTCGTTTCATGGCCATGGAATGCACAATGGGGTCAATCGCCTCAAGTCGCTCTGTTTCCCTCTCTCGATTGTTCGTTTGTTTTTTGAGTTAAGGATATGGTGGTGAATTGTATACTGTTTCCCTCCAACTGTCGTTGGGGGAAGGTGTCGTCGGTTGAGATTTATATCATAAAATTTAATAATTACTTTTATTTTCCTCCAATTTTAATTGTTTTATTTGCAATATAATATTATACATTATATCAAAATTGAAGGTTATTAGTATAATCTTGAATAGTATGTAATTGACATATGAGAGAATTATATTTAAGTAACATCCCGAATGACCTATAGTATGTAGATAAGGTTGGGTGTTTGTCCTGCTAACACTATTGATACAACTCATTTTGTAATTGTTATAAAAGATTTAATTCAAATCGTTTATGCGAAAAAATATGTATAGGGTTATCATATACGATAAATTTGTTAATCGAGAAGTTTAATATTTCATAAGATGATCATATGTGACTCGATCCTAATCCTGGTTAAATTATGAATTCTATCCGTGAGAGTTTGTCTTATGATTTGCATGTGTGAGAATGACATTTGTAGTCGATTCAATATGTTTATCATTTTAGGTACTAGACCAAGTAGAGAACATAATTTAACGAGATGAAGTTCACTCTTTTCTATATAAGACAAGCTCCCTCGAGTAGTAATTTCAAGACTTGAATAATGGGGTCTCACCCTTATACTAAACTTATGGTTGGATCATAAACAAATGGTCCTTTGACTTAGTTGTACTTACGAACAACTCGAGAATGACGGACTTGTGATAATTATATCAATGGACATACCCATTTGTCTGAATTTAAAAGTAATTACGTATGGATAAACAAAATTAGACAAAATGATTAACCATTCATCAACGACTTTCCTTTATGTTTTATCGGATTTGATTGACCTCGTCCCATTTCATAAATCTCCGAGCTACCCTTAATCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGGAATTACATATGAAAATTCCCCATGATTAGCTCAATTAATGGCTCTACTTGAATCCAAATTTCTTAAACTTACCCACAACAACAATCCAGACTGGTTCTTCTTTTGTTGTGTCCCACTTTTACAATAAAACAAAAAAACAACACCACTTTTGTTTCCTTTCCAAAAGTGTGGGACAGGCAGCATGGTTGGATAAAATTGCATGTAAAAATCAAAAAACAAACACATAATGACTTATCCTCTTATAAATACACCAAATGGGCTGCAGAGTTTCTCCATTAACTTAGCTGCCATTTCACAGCTTTTCTTGAAGAACACAAAAAAAAAAAAAAAAAAAAAAATCCTNATGGAAGCCAGCAGTGAAAATAGGTTCAATTTGTTGCCTCCTGGTCTCAGATTTTGCCCAACTGATGAAGACCTTGTGCTTCACTTTCTTTATCATAAGGCTTCTCTTGCCTCACCTCACCATTCTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGGTAACATCTTTCTCTCTTTCTCTCTCTCAATTTACCCTAATTTCGTGAGATCCCACGTCGATTTGAGAGAGTAACGAGTGTCAGCGAGGACACTAGGCCCTAAAAAGATAGATTGTGAGATCCCACATCAATTGGAGAGAAAAAACGAGTGCCAATGAGGACGTTGGGCCCTTAAGGGGGTAGATTGTGAGATCTCACGTCAATTGGAGAGGAGAACGAGTGTCAACGAGGACGTTGGGCCTAAATAGGGTGGATTGTGAGATCTCGCATCAATTGTAGAGAAGAACGAGTGCCAACGAGGACGTTGGGCCTTAAAGGGGGTAGATTGTGAGATCCTACATCAATTGAAGAGGAGAACGAGTGCCAGCAAGGATGCTGGACCTCGAAGAAAGTGGATTGTGAGATCCCACGTCGATACGAGAGAGTGAAACAAAACATTTTTTATAAGATGTGGAAACCTCTCCGTAGCATTTGTGTTTTAAAATTTTTGAAGAGAAACTCAATAGGAAGTCAAAATAGGACAATATTTACTAGCAGTGGACTTGAGCTGTTACGTCTACCATTTTAGTAAGCTACAAGATTTTGAGATTCGGTTATCAAAATTAGTATCCAAAACCAATAACGTGTTTAAAATGACTTTTTATGCGTTTTTTAATACCTAAAAAGGTGTTCCAACCTATTGTTTACCGAACCATCGTATCGTAACGTTTGAACTTTTAAGAGTACTAAGAGTGAATTAAAACTGGCGTTTTGGACAGGGAGAGCACTTTCAAATGGGGATATTCATTACTTTTTCAGCACAGTGGGAGAAAGCAAAGCAACAGAGAATGGATATTGGAAAGATGTGTTAATGGATGAGCCAATCTTGTGCAGTGCCACTGGGGACGAAGTGGGTATCAAAAAATATCATATTTTCTTTGTTGGTGAAGGAGATGACTCGCCAACGCCCATCCAAACCACCTGGGTTATGCAAGAATACCGCATTTATAGCTACCTTTTGGATACCCATGCCCACTCTCCAGACACTCTACCAAAACAAGAATCAGTAAGTCAAACAAAAATCAGCCATCTTTCTGTTCATCTTCATCTGTTCTTGTTCTTTCAATTTCTTATTTCTTGGTATCTTTTTTCGTTTTGGTTGATTATAAATATGTAATGTCCCACCTCCGATGGGAGGAGAATGAAATATCTTTTATAAATGTGTGGAAACCTTTCCTTAGCAGACGCGTTTTAAAAACCTTGTGGGGAAGCCCGAAAGGGGAACCCAAAGAAAACAATATCCGTTAGCGATGGGTTTGGGCCGTTACAAATGGTATCAAAGTCAGACACTGGACAATGTGCCAGTGAGAAGGCTGTTCCCCGAAGTGGGTAGACACAAGTCAGTGTACTAGTAAGGACGTTGGATCCCAAAGGGGGTGGATTTGGTGGGGGTCCATATCAATTAGAGAAAGGTACGAGTGCTAACGAGGAAGTTAGGCCCTGAAGGGAGTGGATTGCGATATCCCACGTCGGTTGGAGAGGAGAATGAAACGCCCTTTATAAGGGTGTGGAAACCTCTCCCTATCCGACACGTTTTAAAAACCTTGAGGGAAAGCTCGAAAGGGAAACCCAAAGAGCACAATATCTACCCGCAGTGGGTTTGGGCCGTAACAAAATCTTTGTGTTTTTCAATGGTTTCTAGCACAGTTTGGTTTGGTGAAATATGTTCAGGTCGTTAGTTTATTTGGAATTAACGTAAATTCTTATTATTGTTGTAATTTGAACAGGAGTTCGGACTATGGGTTATGTGTCGAGTTTTTGAAGCAAAAGACAATAGTACAAGAAGTATCTTTAGTTACGAGGACGACGAAGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGTCGATCGATGATATTTGAATCGATTATGAATATTTATTAAAGTTCTAATGGTT ATGATTATCAGTGAAAATAGGTTCAATTTGTTGCCTCCTGGTCTCAGATTTTGCCCAACTGATGAAGACCTTAGTGAATTAAAACTGGCGTTTTGGACAGGGAGAGCACTTTCAAATGGGGATATTCATTACTTTTTCAGCACAGTGGGAGAAAGCAAAGCAACAGAGAATGGATATTGGAAAGATGTGTTAATGGATGAGCCAATCTTGTGCAGTGCCACTGGGGACGAAGTGGGTATCAAAAAATATCATATTTTCTTTGTTGGTGAAGGAGATGACTCGCCAACGCCCATCCAAACCACCTGGGTTATGCAAGAATACCGCATTTATAGCTACCTTTTGGATACCCATGCCCACTCTCCAGACACTCTACCAAAACAAGAATCAGAGTTCGGACTATGGGTTATGTGTCGAGTTTTTGAAGCAAAAGACAATAGTACAAGAAGTATCTTTAGTTACGAGGACGACGAAGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGTCGATCGATGATATTTGAATCGATTATGAATATTTATTAAAGTTCTAATGGTT ATGATTATCAGTGAAAATAGGTTCAATTTGTTGCCTCCTGGTCTCAGATTTTGCCCAACTGATGAAGACCTTAGTGAATTAAAACTGGCGTTTTGGACAGGGAGAGCACTTTCAAATGGGGATATTCATTACTTTTTCAGCACAGTGGGAGAAAGCAAAGCAACAGAGAATGGATATTGGAAAGATGTGTTAATGGATGAGCCAATCTTGTGCAGTGCCACTGGGGACGAAGTGGGTATCAAAAAATATCATATTTTCTTTGTTGGTGAAGGAGATGACTCGCCAACGCCCATCCAAACCACCTGGGTTATGCAAGAATACCGCATTTATAGCTACCTTTTGGATACCCATGCCCACTCTCCAGACACTCTACCAAAACAAGAATCAGAGTTCGGACTATGGGTTATGTGTCGAGTTTTTGAAGCAAAAGACAATAGTACAAGAAGTATCTTTAGTTACGAGGACGACGAAGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGTCGATCGATGATATTTGA MIISENRFNLLPPGLRFCPTDEDLSELKLAFWTGRALSNGDIHYFFSTVGESKATENGYWKDVLMDEPILCSATGDEVGIKKYHIFFVGEGDDSPTPIQTTWVMQEYRIYSYLLDTHAHSPDTLPKQESEFGLWVMCRVFEAKDNSTRSIFSYEDDEDNESELSYLDEMYLSIDDI Homology
BLAST of Cp4.1LG05g10450 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.5e-23 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11 Identity = 51/162 (31.48%), Postives = 72/162 (44.44%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy Swiss-Prot
Match: K4BNG7 (NAC domain-containing protein 2 OS=Solanum lycopersicum OX=4081 GN=NAP2 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11 Identity = 54/194 (27.84%), Postives = 84/194 (43.30%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.0e-10 Identity = 50/166 (30.12%), Postives = 75/166 (45.18%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy Swiss-Prot
Match: Q84WP6 (NAC domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=NAC043 PE=2 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09 Identity = 47/182 (25.82%), Postives = 82/182 (45.05%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. NCBI nr
Match: XP_023534627.1 (NAC domain-containing protein 104-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 330 bits (846), Expect = 3.13e-113 Identity = 166/200 (83.00%), Postives = 169/200 (84.50%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. NCBI nr
Match: KAG6605330.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035288.1 NAC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325 bits (833), Expect = 3.00e-111 Identity = 163/200 (81.50%), Postives = 168/200 (84.00%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. NCBI nr
Match: XP_023007250.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 321 bits (822), Expect = 1.42e-109 Identity = 160/200 (80.00%), Postives = 167/200 (83.50%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. NCBI nr
Match: XP_022947761.1 (NAC domain-containing protein 104-like [Cucurbita moschata]) HSP 1 Score: 320 bits (821), Expect = 2.02e-109 Identity = 161/200 (80.50%), Postives = 167/200 (83.50%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. NCBI nr
Match: XP_038900898.1 (NAC domain-containing protein 104-like [Benincasa hispida]) HSP 1 Score: 259 bits (663), Expect = 2.26e-85 Identity = 135/200 (67.50%), Postives = 154/200 (77.00%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy TrEMBL
Match: A0A6J1L2G4 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499792 PE=4 SV=1) HSP 1 Score: 321 bits (822), Expect = 6.88e-110 Identity = 160/200 (80.00%), Postives = 167/200 (83.50%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy TrEMBL
Match: A0A6J1G7C6 (NAC domain-containing protein 104-like OS=Cucurbita moschata OX=3662 GN=LOC111451523 PE=4 SV=1) HSP 1 Score: 320 bits (821), Expect = 9.78e-110 Identity = 161/200 (80.50%), Postives = 167/200 (83.50%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy TrEMBL
Match: A0A0A0LME0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G334550 PE=4 SV=1) HSP 1 Score: 243 bits (621), Expect = 5.57e-79 Identity = 130/214 (60.75%), Postives = 151/214 (70.56%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy TrEMBL
Match: A0A6J1DVM4 (NAC domain-containing protein 104-like OS=Momordica charantia OX=3673 GN=LOC111023517 PE=4 SV=1) HSP 1 Score: 239 bits (611), Expect = 1.02e-77 Identity = 127/204 (62.25%), Postives = 147/204 (72.06%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. ExPASy TrEMBL
Match: A0A6J1L012 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499792 PE=4 SV=1) HSP 1 Score: 236 bits (602), Expect = 8.78e-77 Identity = 117/153 (76.47%), Postives = 121/153 (79.08%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 ) HSP 1 Score: 109.0 bits (271), Expect = 3.9e-24 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 9.1e-13 Identity = 51/162 (31.48%), Postives = 72/162 (44.44%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11 Identity = 50/166 (30.12%), Postives = 75/166 (45.18%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 ) HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11 Identity = 55/201 (27.36%), Postives = 88/201 (43.78%), Query Frame = 0
BLAST of Cp4.1LG05g10450 vs. TAIR 10
Match: AT2G46770.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10 Identity = 47/182 (25.82%), Postives = 82/182 (45.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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