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Cp4.1LG05g10410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGCCGTAAATATTGGGCCTCTACAAACTGGGCCTCTACAAAAGTTTTCTTGTTCATCTTTCTTTTAAAAGAATCTAAAAACCCTAATTTTCGACCTAGCAGGTCGAAGTTCGTGTTCGCAGCAGCAGAGGGACGAGGGGACGAGGGGACGAACGCCATGGGGAGAAGTATTTGTTTTTCCTCTGCCTTCTTCCATTCTCTTTACTTGTCTAATGAACATTTTTCATCCTTAATGTTTGGATATATCTTTGGTGATAAAGCTTTGTTATCTGCAAATGCCGATTGATTGATGATTGGTTTTCATTATTTTTGCATAGGACCTGCTAGATGTTATCGCCAAATTAAGAATAAGCCCTACCCAAAATCGCGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAAAATGTATCCAGTGAGGCTTTGGAAGCAGCTCGTATTGCCTGCAATAAGTATATGTCGAAATTCGCTGGGAAGGATGCGTTTCATTTGAGGGTTAGGGTGCATCCTTTCCATGTTCTGCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGAATGAGAGGTGCGTTCGGTAAGCCCCAAGGAACTTGCGCTAGAGTGGACATTGGTCAGGTTCTTCTTTCTGTTCGTTGCAAGGACAACAACAGCCAACATGCTCAGGAGGCCCTTCGCCGTGCTAAGTTCAAGTTCCCGGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGTATGCCCCTTAACTGGGTTTAATGTAGTTTCAGTTTTCTTAGCCTTGAATTTTATGTGTGCACTTTTCAAAATCGTAGTTCTTTGCCTGGGATCTGATGGGAACATTTTAGAGTATTTTATTTGATTGAATGTTGATTGTTCCAAACTGTTTTTTTTTCTCAGGGGATTCACTAAGTTCAGCCGAGCTGATTATCTAAAGTTCAAGTCAGAGAACAAGATTATGCCCGATGGTGTTAATGCCAAGGTAAGCGACATTGTGGACAACTATATCATTGCTTTCCTGTTCTTATTGTTGGAAATGGATTGAGCTTTTTTCTGTTTGTTTTTTTATAAAAGCGCGATATAGGAGAATGAATCTAATGGTAGTTTGGAGAGGCTACCTTTTCTTTCCTTCAAAATAAATTTCGTTGCATTAAACTAAAACAATTTAGTGCGAAGTATTTATTCATTCATTTATTTTTTGAGTTCATCAATTGTAAAGTAGGGGATTGAATTGTTGACCTCTTGGATGGTAATAGTCTTCTCTAAGTTATGCTCGGGTTGACTAGTACTCAGCATCCAATACAAGGTCTATTGAATCTATAGAAACGTAGGGCACGTCTCTAAGACATACAACAAAGTTATTCACTAGATGATATGAATGGCTTCTAGGTTGGGATTTGTGTCATAGAATTATATTTTTGTAGCATAAGCTTATATATTTCTTGGGTCTTCATACTTGGAAGCACAATCTATAGAAACGTAGGGCACTTCTCTAAGACATACAACAAAGTTATTCACTAGATGATATGAATGGCTTCTAGGTTGGGATTTGTGTCATAGAATTATATTTTTGTAGCATAAGCTTATATATTTCTTGGGTCTTCATACTTGGAAGCACAACAATATGTGGCCAAAATATGTTTCTTATTTCTATCGTTTGTTTGGAGTTGCATGGTATTGTTTTTCTTTATATTTGTTAACCCGTGGGGTTGCATTTGGACTGTGCAGCTTCTTGGATGCCATGGCCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTGAAGCTGCCTAAGCTAAGCTAGTCGATTTTGTCAGTTTTAAATTTATATGGAATTTATGTTCACATTATTACCATTAAGTCTGTTTGAACATTGTGAAATGAGGGAGTTTCTGCTTGCCTTGGTTTATTACTTTTTGATATTTTAAATGAAACTTATTTCTTCTCTCTGTATTAGCTTGCAATTCTGACAGTTTTGATTTAATACCTAGTTGTTTAAGAGAACGTTGGAGATAACAGTAAATGAGGTTTCAAGGCAACTGATGAGAAATTCTTGCCTAGAACTAGGTCGTTTACAAAAAATTTCTACGTGTGTTTATTTTTTTTTTGCAGAAGCTTGTAGAATTGCCAATTTTTTAAGATTCTATTGTTCTTTCTTTACTTCGTATGAATGATAATATGATGGTAGCTAAATAACCATTCCTGCTTGT CGGGCCGTAAATATTGGGCCTCTACAAACTGGGCCTCTACAAAAGTTTTCTTGTTCATCTTTCTTTTAAAAGAATCTAAAAACCCTAATTTTCGACCTAGCAGGTCGAAGTTCGTGTTCGCAGCAGCAGAGGGACGAGGGGACGAGGGGACGAACGCCATGGGGAGAAGACCTGCTAGATGTTATCGCCAAATTAAGAATAAGCCCTACCCAAAATCGCGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAAAATGTATCCAGTGAGGCTTTGGAAGCAGCTCGTATTGCCTGCAATAAGTATATGTCGAAATTCGCTGGGAAGGATGCGTTTCATTTGAGGGTTAGGGTGCATCCTTTCCATGTTCTGCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGAATGAGAGGTGCGTTCGGTAAGCCCCAAGGAACTTGCGCTAGAGTGGACATTGGTCAGGTTCTTCTTTCTGTTCGTTGCAAGGACAACAACAGCCAACATGCTCAGGAGGCCCTTCGCCGTGCTAAGTTCAAGTTCCCGGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAGTTCAGCCGAGCTGATTATCTAAAGTTCAAGTCAGAGAACAAGATTATGCCCGATGGTGTTAATGCCAAGCTTCTTGGATGCCATGGCCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTGAAGCTGCCTAAGCTAAGCTAGTCGATTTTGTCAGTTTTAAATTTATATGGAATTTATGTTCACATTATTACCATTAAGTCTGTTTGAACATTGTGAAATGAGGGAGTTTCTGCTTGCCTTGGTTTATTACTTTTTGATATTTTAAATGAAACTTATTTCTTCTCTCTGTATTAGCTTGCAATTCTGACAGTTTTGATTTAATACCTAGTTGTTTAAGAGAACGTTGGAGATAACAGTAAATGAGGTTTCAAGGCAACTGATGAGAAATTCTTGCCTAGAACTAGGTCGTTTACAAAAAATTTCTACGTGTGTTTATTTTTTTTTTGCAGAAGCTTGTAGAATTGCCAATTTTTTAAGATTCTATTGTTCTTTCTTTACTTCGTATGAATGATAATATGATGGTAGCTAAATAACCATTCCTGCTTGT ATGGGGAGAAGACCTGCTAGATGTTATCGCCAAATTAAGAATAAGCCCTACCCAAAATCGCGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAAAATGTATCCAGTGAGGCTTTGGAAGCAGCTCGTATTGCCTGCAATAAGTATATGTCGAAATTCGCTGGGAAGGATGCGTTTCATTTGAGGGTTAGGGTGCATCCTTTCCATGTTCTGCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGAATGAGAGGTGCGTTCGGTAAGCCCCAAGGAACTTGCGCTAGAGTGGACATTGGTCAGGTTCTTCTTTCTGTTCGTTGCAAGGACAACAACAGCCAACATGCTCAGGAGGCCCTTCGCCGTGCTAAGTTCAAGTTCCCGGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAGTTCAGCCGAGCTGATTATCTAAAGTTCAAGTCAGAGAACAAGATTATGCCCGATGGTGTTAATGCCAAGCTTCTTGGATGCCATGGCCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTGAAGCTGCCTAA MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSEAA Homology
BLAST of Cp4.1LG05g10410 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-119 Identity = 200/217 (92.17%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 8.8e-119 Identity = 204/219 (93.15%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 2.6e-118 Identity = 202/220 (91.82%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy Swiss-Prot
Match: A2Y0T4 (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica OX=39946 GN=SG12 PE=2 SV=2) HSP 1 Score: 409.8 bits (1052), Expect = 1.9e-113 Identity = 195/219 (89.04%), Postives = 205/219 (93.61%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy Swiss-Prot
Match: Q0DKF0 (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=SG12 PE=2 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 1.9e-113 Identity = 195/219 (89.04%), Postives = 205/219 (93.61%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. NCBI nr
Match: XP_022947484.1 (60S ribosomal protein L10-like [Cucurbita moschata] >XP_023007269.1 60S ribosomal protein L10-like [Cucurbita maxima] >XP_023534617.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6605333.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 456 bits (1174), Expect = 3.27e-162 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. NCBI nr
Match: XP_022932025.1 (60S ribosomal protein L10 [Cucurbita moschata] >XP_022973818.1 60S ribosomal protein L10 [Cucurbita maxima] >XP_023512390.1 60S ribosomal protein L10 [Cucurbita pepo subsp. pepo] >KAG6571334.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 453 bits (1166), Expect = 5.43e-161 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. NCBI nr
Match: KAG7011109.1 (60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 453 bits (1166), Expect = 1.35e-160 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. NCBI nr
Match: XP_004147346.1 (60S ribosomal protein L10 [Cucumis sativus] >KGN62212.1 hypothetical protein Csa_016962 [Cucumis sativus]) HSP 1 Score: 446 bits (1147), Expect = 4.29e-158 Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. NCBI nr
Match: XP_008460864.1 (PREDICTED: 60S ribosomal protein L10 [Cucumis melo] >XP_038900395.1 60S ribosomal protein L10 [Benincasa hispida] >KAA0040746.1 60S ribosomal protein L10 [Cucumis melo var. makuwa] >TYK02062.1 60S ribosomal protein L10 [Cucumis melo var. makuwa]) HSP 1 Score: 446 bits (1146), Expect = 6.10e-158 Identity = 214/220 (97.27%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy TrEMBL
Match: A0A6J1L4H1 (60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111499807 PE=3 SV=1) HSP 1 Score: 456 bits (1174), Expect = 1.59e-162 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy TrEMBL
Match: A0A6J1G6Y3 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111451338 PE=3 SV=1) HSP 1 Score: 456 bits (1174), Expect = 1.59e-162 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy TrEMBL
Match: A0A6J1IE94 (60S ribosomal protein L10 OS=Cucurbita maxima OX=3661 GN=LOC111472366 PE=3 SV=1) HSP 1 Score: 453 bits (1166), Expect = 2.63e-161 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy TrEMBL
Match: A0A6J1F123 (60S ribosomal protein L10 OS=Cucurbita moschata OX=3662 GN=LOC111438352 PE=3 SV=1) HSP 1 Score: 453 bits (1166), Expect = 2.63e-161 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. ExPASy TrEMBL
Match: A0A0A0LN38 (Ribosomal_L16 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336100 PE=3 SV=1) HSP 1 Score: 446 bits (1147), Expect = 2.08e-158 Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 407.9 bits (1047), Expect = 5.1e-114 Identity = 193/220 (87.73%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 404.4 bits (1038), Expect = 5.7e-113 Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 ) HSP 1 Score: 401.0 bits (1029), Expect = 6.3e-112 Identity = 190/217 (87.56%), Postives = 201/217 (92.63%), Query Frame = 0
BLAST of Cp4.1LG05g10410 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 274.6 bits (701), Expect = 6.8e-74 Identity = 139/216 (64.35%), Postives = 148/216 (68.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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