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Cp4.1LG05g10350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTGGTCCCAAAGAAATAGAAAACGCAGCCTTTGGAGTCAACCGGCCAACCCTAAGCACTCTTTCTGCCGCCACACTCACTAATTTTCACTATAAAACCGCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCCCTTCGGTTATTGTCAATCTCTCTTCGCTTTTCCGTCGCCGCCGTTGCCGTCGCAGCCGAGCCGCCACGCCAGGTCAGTCTTTCTTCTTCTTCTTCTTTCGTTAAGGCGTTGTATTTTAATGGATTCATCGCTCTTTCGTTTTGTTTTTGTTCCTGTTTTTTTGTAAGTATGGTTGTTGGAACTGGTTACATTGATGTTGTTCGAGGGGATTGAACTGAACTGAACTGTTGTTTGTTAGCCATTCCTTCAGAAATTTGATTTAATACAAAACTGGTTTTTAAGGGAATGTTCATGTTTTAAATGTGAGGGAAGAGAGGCGGATTTGGGGCAGAAATTGAAATGCATTTGAGTAACCGCTTCTTCTAGGGTTTAATGTTTAATGTTTAATGTTTATTATGCATGTTTAAACTATGATTAGAATAAATGACCACAAAAATGAAGAAAAACGTGATTAAATCAAACTAATTTTACTTTTATATAATAACTTTAATTATAGAAGTTTATCATATCTTTCTTGGAGGAGGCACAAGTAGAGAGAGAGGGAGATCAATTGACCACGAGTGCAACGAGAGGAAAATTGAAAAGATAAACGAGAGAATTGGAAATTATACTGTGTGCTAACTCAAGACTCTGAGAGATAGGGTGTGTCGGTTTTGGCAAAGGTAAACTATAAGGACTAACCGAACAATTTTGGTTCTGTTTGTTTGATTTGAGATGAATTCAGGTTGGCAACCGAACAATTTTGGTTTGCTTTGATTTAAGATAAATTCATGTGGACAACCGAATGATTGTGGTTCAGTTCGATTTCTTGGGTTCGACTAGGTTTTTTTAATCCTTTACCGAAGTTCTTCACAAAGTTCTTCAACAGAATAATTGTGGTTCAATTCGGTTTTTATGCCACCAAGTTTGTAGAGAACTTGTTTTCCCACAAACGTTTTTGTAGGAAGATTTGCCGATGTTATTGCTTTTATATTTAAATAAGTTTAATGAATTAAATAATTAATAATTTTATAAGTATCTCTAATAATTATTCACAAAACAAAAAGGTTCCTTTTCACCCCGCAAGCCCTAGCTGATTTTTTCTCTCGTCGCGATATATCTCTCTCTCTCCATTGGCAGCCGGCACCTCTGATTTTCGCCATCGGCTAAGAATTTCTCCTGTAAGCTCTCTCTCACTCGCTTCTGTCTCATTCTCACTCTGTTTTAGCCCATCTCTCCCTCTCCATCTCACTGTCCTTCCGTCTCTCTCCATCGCTTTGCGCCCTCAATTACCACACACTGTCTCTGTAGTCTGAAAAAAAGAAAAAGAAAAATTAGTATGCAATAAACCATCAGGATTGTGAGGGCTGTTTTTATATTTTTATTTATTTTTTTTTTTTTTTTGGAGTTTGGAATCTTTGTGTAAGCATAAGATATATCATTGGTTATGAATAATGGAAAACTGATATTGACTTTGGTTTTTATGAACACACGGTCTAGCCAATGTTTTTTTTTTTCTAGCTCAACTAGTCAATTGCGCAGAGAAAGTGATTCCAGCATTACTGGTCTTCTGTTATCTTGTCATAATCGAGAGAGGGTCACATCTAACTGCCTTTTACTATGCAGGGGTAGCAAGGGACTCCTAATTTGTCATCAAGGGAGGTTGTTGTTGATTGATCAAGGTTGTCTTTTGCAATCATGGCGAACAGTAAGTCTCACCAATTTTTTGTTCCTTATTTTACTCATGTTCATGTTTCCTTCTCTAGCTACTTTTATTGTATCTTTAAATAATTTTCGTTGGGCTTGAGTCAACTAGTACGTTTCTCACTTGCTGTTGTTCTTCAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGGTTTTTTTCTTTTTCCTCTCATGTTTCCTGATCATGCTTCTGTATCTTTTGCTTAAGAGAACAAAATAGGCAATAATCTCGCTTTAAGTTGTCTACTTTGAATGGGAACCGATTTCTCACGCATTGTTTGCATGGTTTAGTTCCTTCGAAGCTGAATTAGCTGTTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGTTTGTGAAATTTTTTTGTCGCATTATTTTCAGCATCTTAGGTTCCCATAATGATATGAGGCCCATACTACTTATTTGCACTGCATGTTGATATAATATATCAGTTATTCATTTTTTATATTCCTTACTGCAGGAAACAAAAATGGGCTCCTTGTACCCCACACCACTACTGACCAAGGCAAGCTTTTTTCTATATTCTTGTCATGTTACGCCTTTCATTAGTAATTAGGGGTATATTACCTGCAGTCTTATGCCTCTTTGAACATCTTTGTCTCTCTTTTAACAAGCCAGAGAGATTGAAGTGAAGTTAATGGAACTAAAATTAATTTATCCTCCCCTGCTAAAACTTTGACAGGAGGATCATTCATACTATTGTTTTAGCATAGATTCTGACTGGCCGTTTACATGATAAAATTGTAAATGGTTACCTCCTTGATCAATAAGAGTCTAATTATTCTCATTTATGAACGTGTTCTGAGTTTGAAACTTTAAATTCTGTACGTCTGTTTTGATTCTGTTTTTGTGGTGTCAGTGAAGCCTAAACATTTCTTACGTAATTTTAGCAGCCACTAACAAATTGATATGCATTTTCATCTTTCTACATCTGTAAATTAACACTTCTGCTGTTGTTTTTCACTGCTACCTTTTATTTCCTTCATGTCTTGCACATGATACCTGAAACTGTAGGCGTAGGCATTATTAAGTTTGTTTCAATACAATTTCCTATAGTGAGGATGCTTTATGAAATTAAGTTCGTTCCGACTTCCCTAAAACTCGTCTGGATGTTCTTTGATTTATGTTAAAATGTGATGATGATGTGTAATGTGTAATGCCAAATACGAAATTGACGTTATGCTTGTATTCTTTTCATTTTGAAGAACTTCAGCACTTGAGAAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGTATTTTTTCTTATCCTTCCTTAAAATTACTTCTAGTTGGGCTTTGTCAATTGTCAATGTTGAGCACATATCTAAATAAAGACGGGACACTGAGTGGATCGTCTTTTTATAAATAAAAAATAAAAAAATTATATATAACGTAACTCAAGACTGATTTAGCTCTTAGTAACATGTTCTCCTATCCCTTGTTAGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTGTTTAGGCAGACAGTTGCTGGTAATGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTAATTTTCACCCTTCCTATGCTTTTTTAACAAGGTGTTGTCTCATATTTTTTTCAACTTCATGTTAAAAATTCTCTGTAACTTTGAATTGTGCAAACATTCTGCAGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCGTTGGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATTGTCAATGACTGGACTGCATTCTGTGGTTCAGACACAACTGCCACAGAATTATCGGTCGTCGAAAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGCTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACAGTTATGTGTGAAAGTTAGTTATATCTTCTGCTACACCTGAGATGTTGCAGAAGCACGTAAGTTATTAATTGTTATTACTATTATCTCTTTTCCTTCTGTCATATTTAACAACTTTGTAATTATGAAATTTGACTCTGCATTTATAGCTTGTTTTATTCGAAATTGGGAAACCATATTTTGCTATTATGAACGTGTTACTTTTTTGTATATGTTTCAGTATGGTCAATTGGATTTGGAACAAAGGAATTTGAATATTTGACTTCATCATA TGCTTGGTCCCAAAGAAATAGAAAACGCAGCCTTTGGAGTCAACCGGCCAACCCTAAGCACTCTTTCTGCCGCCACACTCACTAATTTTCACTATAAAACCGCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCCCTTCGGTTATTGTCAATCTCTCTTCGCTTTTCCGTCGCCGCCGTTGCCGTCGCAGCCGAGCCGCCACGCCAGGGGTAGCAAGGGACTCCTAATTTGTCATCAAGGGAGGTTGTTGTTGATTGATCAAGGTTGTCTTTTGCAATCATGGCGAACAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTTCCTTCGAAGCTGAATTAGCTGTTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCCCACACCACTACTGACCAAGGCAAGCTTTTTTCTATATTCTTGTCATAACTTCAGCACTTGAGAAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTGTTTAGGCAGACAGTTGCTGGTAATGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCGTTGGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATTGTCAATGACTGGACTGCATTCTGTGGTTCAGACACAACTGCCACAGAATTATCGGTCGTCGAAAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGCTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACAGTTATGTGTGAAAGTTAGTTATATCTTCTGCTACACCTGAGATGTTGCAGAAGCACGTAAGTTATTAATTGTTATTACTATTATCTCTTTTCCTTCTGTCATATTTAACAACTTTGTAATTATGAAATTTGACTCTGCATTTATAGCTTGTTTTATTCGAAATTGGGAAACCATATTTTGCTATTATGAACGTGTTACTTTTTTGTATATGTTTCAGTATGGTCAATTGGATTTGGAACAAAGGAATTTGAATATTTGACTTCATCATA ATGGCGAACAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTTCCTTCGAAGCTGAATTAGCTGTTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCCCACACCACTACTGACCAAGGCAAGCTTTTTTCTATATTCTTGTCATAA MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAVVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKLFSIFLS Homology
BLAST of Cp4.1LG05g10350 vs. ExPASy Swiss-Prot
Match: Q9M060 (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.4e-35 Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy Swiss-Prot
Match: O81920 (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris OX=161934 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.0e-30 Identity = 65/79 (82.28%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy Swiss-Prot
Match: Q9TU47 (Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 7.0e-27 Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy Swiss-Prot
Match: Q12522 (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIF6 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 7.0e-27 Identity = 59/79 (74.68%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy Swiss-Prot
Match: O55135 (Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 9.2e-27 Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. NCBI nr
Match: XP_022158453.1 (eukaryotic translation initiation factor 6-2-like [Momordica charantia]) HSP 1 Score: 159 bits (401), Expect = 1.44e-48 Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. NCBI nr
Match: XP_023533549.1 (eukaryotic translation initiation factor 6-2-like [Cucurbita pepo subsp. pepo] >XP_023533550.1 eukaryotic translation initiation factor 6-2-like [Cucurbita pepo subsp. pepo] >XP_023533551.1 eukaryotic translation initiation factor 6-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164 bits (414), Expect = 1.61e-48 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. NCBI nr
Match: XP_022948101.1 (eukaryotic translation initiation factor 6-2 [Cucurbita moschata] >XP_022948102.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata] >XP_022948103.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata] >XP_022948104.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata] >XP_023007233.1 eukaryotic translation initiation factor 6-2-like [Cucurbita maxima] >XP_023007234.1 eukaryotic translation initiation factor 6-2-like [Cucurbita maxima] >XP_023007235.1 eukaryotic translation initiation factor 6-2-like [Cucurbita maxima] >KAG6605343.1 Eukaryotic translation initiation factor 6-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035300.1 Eukaryotic translation initiation factor 6-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161 bits (407), Expect = 1.84e-47 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. NCBI nr
Match: XP_021911239.1 (eukaryotic translation initiation factor 6-2-like [Carica papaya]) HSP 1 Score: 154 bits (389), Expect = 9.76e-47 Identity = 74/87 (85.06%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. NCBI nr
Match: DAD37060.1 (TPA_asm: hypothetical protein HUJ06_007701 [Nelumbo nucifera]) HSP 1 Score: 151 bits (381), Expect = 1.31e-45 Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy TrEMBL
Match: A0A6J1DW46 (eukaryotic translation initiation factor 6-2-like OS=Momordica charantia OX=3673 GN=LOC111024937 PE=4 SV=1) HSP 1 Score: 159 bits (401), Expect = 6.98e-49 Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy TrEMBL
Match: A0A6J1L2F0 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111499780 PE=3 SV=1) HSP 1 Score: 161 bits (407), Expect = 8.92e-48 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy TrEMBL
Match: A0A6J1G8F7 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111451787 PE=3 SV=1) HSP 1 Score: 161 bits (407), Expect = 8.92e-48 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy TrEMBL
Match: A0A453AYK6 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 3.33e-47 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. ExPASy TrEMBL
Match: A0A6J1I8L9 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111472384 PE=3 SV=1) HSP 1 Score: 155 bits (391), Expect = 2.34e-45 Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. TAIR 10
Match: AT3G55620.1 (Translation initiation factor IF6 ) HSP 1 Score: 147.9 bits (372), Expect = 3.8e-36 Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Cp4.1LG05g10350 vs. TAIR 10
Match: AT2G39820.1 (Translation initiation factor IF6 ) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-22 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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