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Cp4.1LG05g10210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATGGAGTGTAGGCCAGAGATGGTCATTGTTCGTGGCTTTCTGGGATTAGTTAAGTAAAGAGATTTAGAAAGGAATGCTTGTCTGAAGAAATTCCATGCTCCTCCTTAATTGTTAAAAATGCTGTTACAGTCTTCCTTTCATGTAGGAGCATTTAGTTGGCATCTAGCGTTGAATTAGATTACAAAAACAAATTTTGTGTATCATTTTCCCCTCTTCTTTATGGAGTTCAACATTAATCAATAGTTGTGATGGCCAACTGCAGATCGCGGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGA ATGGGAATGGAGTGTAGGCCAGAGATGGTCATTGTTCGTGGCTTTCTGGGATTAGTTAATTGTGATGGCCAACTGCAGATCGCGGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGA ATGGGAATGGAGTGTAGGCCAGAGATGGTCATTGTTCGTGGCTTTCTGGGATTAGTTAATTGTGATGGCCAACTGCAGATCGCGGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGA MGMECRPEMVIVRGFLGLVNCDGQLQIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK Homology
BLAST of Cp4.1LG05g10210 vs. ExPASy Swiss-Prot
Match: P54778 (26S proteasome regulatory subunit 6B homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 5.6e-19 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy Swiss-Prot
Match: Q9SEI4 (26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 7.3e-19 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy Swiss-Prot
Match: P85200 (26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.3e-18 Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy Swiss-Prot
Match: P46507 (26S proteasome regulatory subunit 6B OS=Manduca sexta OX=7130 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.7e-13 Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy Swiss-Prot
Match: P34123 (26S proteasome regulatory subunit 6B homolog OS=Dictyostelium discoideum OX=44689 GN=psmC4 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. NCBI nr
Match: DAD38580.1 (TPA_asm: hypothetical protein HUJ06_012902 [Nelumbo nucifera]) HSP 1 Score: 98.2 bits (243), Expect = 3.37e-25 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. NCBI nr
Match: KAF2560627.1 (hypothetical protein F2Q70_00014793 [Brassica cretica]) HSP 1 Score: 95.1 bits (235), Expect = 6.70e-24 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. NCBI nr
Match: RHN67943.1 (putative proteasome ATPase [Medicago truncatula]) HSP 1 Score: 94.4 bits (233), Expect = 1.43e-23 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. NCBI nr
Match: OIV91967.1 (hypothetical protein TanjilG_26489 [Lupinus angustifolius]) HSP 1 Score: 94.4 bits (233), Expect = 1.43e-23 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. NCBI nr
Match: ACA58350.1 (putative 26S proteasome regulatory complex protein, partial [Sandersonia aurantiaca]) HSP 1 Score: 94.4 bits (233), Expect = 1.59e-23 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy TrEMBL
Match: A0A1J7FVH8 (AAA_lid_3 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26489 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.90e-24 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy TrEMBL
Match: A0A396ITY6 (Putative proteasome ATPase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0108311 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.90e-24 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy TrEMBL
Match: B1PJP1 (Putative 26S proteasome regulatory complex protein (Fragment) OS=Sandersonia aurantiaca OX=61864 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 7.68e-24 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy TrEMBL
Match: A0A2K3LJU0 (26S protease regulatory subunit 6b (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g034737 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 7.98e-24 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. ExPASy TrEMBL
Match: A0A5K1DEU7 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS19486 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 7.98e-24 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10210 vs. TAIR 10
Match: AT5G58290.1 (regulatory particle triple-A ATPase 3 ) HSP 1 Score: 94.0 bits (232), Expect = 5.2e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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