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Cp4.1LG05g10120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCGGTGAAGAGGTCCGAAAAACAAAAAGAAAGAGAGATAAAATCGGGTCTCACAGTTTTATGACCTTCTCCTTCCGTTAGGTTTCATTATCCGAACCTCACACTTCGCCATTACTCTTTTCTTCTCAACTTCCTTGAAACCAGAGATTTTCTTGTGGATCTTCTTCATCAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTGTTTTTGCCATTTCATCCTCATTTTGTTATCTATCGCATGAATCTTATCGTTTTTCTGCGATCAAGGTTGAACTCTGGTATTTGGATTTGTTTTCGTTTCATCGTCTCTTGCTTGTAGTCACTTTCGATTTGTCTCTCGCTCTTTGTTTTAATGTGTTCGTGAAGCTCTGCTCTGCTGATTGATTGTTTTTCATTACTGATGTGCTAATTGATTTTTTTTTTTTTTTTTTACCGTTATTTTGTATTTTGTCTGTTTCGTGTACTGATCTCGGATTTAGTGAGCTGGATCATGTTTGGTATTCCAGACGTTTAATTGGAGCTATTTGTTCATTGATTACATTAATTAATAGACCTGTGCTGGTTTTGACCGACGCCGGAGGATTCAAGAAGTGCTCCACTGAGTGTGTAATTAATTGATTTTCTTCATCCTTATATTCCCGTTCACATTCTTCCACACTAGGTCTTCTTATTTATGGAGTATTTTAATACGGATGAGCCGAGCCAATTTAATTTTATTGCTAAATCTGGCATTTAACTCGGAGAAAAGAGGAAAAATAGAATAGCTATCTCAGTTTCCAATGAAAGAAATGGCGGACATAGATCGTGCTTCCATTATCAAGCTTTTTGCAGGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTTGCTATGTAGATTTCTACATGTAAAATTTCTGTCACGGAAGTTTAAAATTATCATTTTCTTGAGTACACGGGTGGATTTGTATTGGACTCCTGTCTTCTGATAAAATGGCACGCTCTTCAAGCTTTAGAGAGTTTATTGTACAATTTTAAGCGTCTGTTTCTACAGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTATGGTGCACCACAGATGACACAGTTTATGATGCCGTCCAGTCGGTATGCATCTCTGCACTGTTTGAAAGTTCTCATAATCTTTATAATTGTTTACTTCTGCTGCTATTTCTACTTACGCACTCCCTCTTTTTGAATAAAAAAGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGGTACGTGATATGATTTGCTTTATAAATGCAGATATTTCTCTGAATAAATTGGTTCAACTACAAAATTATGGTCCTATCCAATTATGAATGAAGAGATTCATTTACACTGTAGTTTGGGGAAAATAACAAATGCATGTACCCTTGATAACCACTTTTCTTTTTTGAATGCCAATATTTGTGGTTGAGAATTTGAACCTTTAACATTTTGGTCGAAGAATATGCCTTAACTAGTTGAGTTATGCCTAGGTTGGCTACTTTGAAAATTTTTGAAGTTCCCAATATTTTGCAATTGGCTAATTGTGCCAAATATTGGACTTCAAACTCGGCAAGTTCAAACTGCTGATCAGTTTCGTTTTGCGTTGCTACTCTTTTCAAGAAAACTATCTAATGTTTTCTTGGAGGTGGAGAGTAAATTTGCATTATTTCTGCAGTTTTGGAGTACCCAAAATGGTTTCTGCTGAAGATTGTGCCGTGTAGACTAGAACCTGTAATTTAAGATTAGTGGCTTTACCTCTTAATTTTTGGATGACTGCCACAACGTAAGAATCGGTTTTGCACCATTGTATGAATGAGAAAGAATTTGCAAAAGTATTTTGAACTTATATCTAGTGATTATTCAAGGTATTATAGATTTGAATCCACATCTAACCGTAATTAAAAGGTCACCATGTTGTGGCATCTTCATTTAATAATTTTTCATTTATTTGTCATTTTTCCCCTTGCCTACAATTAGTTTTCCTTGTACTATAACAATAGGGTGTTATTTCTAAGCTCTAGGTCCCATAAAGCATCTTCTCATCTTTTGGAATGCAATATCTCAACTTCAGCTTTCTTTTCGTACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGGTATAGTTCTGTCACCTTTTATGTTATGTCAACCAGTCTGGTTTCTTCTTTGCCTCCTGTTTAAAAGATAATCGTTCTTTCTAGAGTTGCAATATTACCATTGACTCATCACCATTGACTCTTCATAAATGACCTAAAATGATCTGACATGATTAGGATGTTTGCTTAGATTAAGTTTGAAAGAACAACATTGAGTTGCATTGATTTTTTCAACCTTCTATCAATTTTTCTATTCGAAAGGTAGTTTTGAAACATTTATGAAAGATTAAGGTTAATGGTAATATTGCAAAATTTTGAAAGGAGTATTTTTTAAACCCGGGACAAAGTTTAAGGGTATTTAGTTTCATCACTACGATGACCATCCATGGATTCACCTATTTAGATTTAAGATAGAAAGAATGACACTAAGTCACTTAGATTTTTTATTCAACGTTTCAACAAATTTTTTACTCTAATGGTAGATTTGAAACATTTACAAAAGTTTAAGGTAGTTTCACAACGTTTGTTCGTTTAAGGTAGTTTCACAACGTTTGAAAGAACAGGGGTACAAGTGACAGTTCATGGGTTGTTTTTATAAGTTAGTTTTTGTTTCATAGAAAAATCAACTACCTTTATTTGCATAGGTATATTGGATGTACTTTTATTTATTTATTATTATTATTATTATTTTTTATGAATAAACAAATCACTTGATGTTGCTTTAATTTGCACACGGGCCTCAATTATTTGTTTAATCTACCCTCCATCTACATAATAGCCACACAAAATATTGGAACTTCGAACAGCAATGACAAATTCCTTTAATTTGTGTTTGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGGTATCACAATACATTGTATTGCTAGATTTGCTCCATTTTTGTCTACTTTCTTTATAACCCGGAGAAAACTGTGTGCATGGTGGACAGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTTAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGAGTTGCTGCTATTGACATTGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTACGTGCACTCTCATGTTGTTTGGTTTGTGCTCAATGATTCTGGTACAATAATCAGTGTCTGGACCTATTATGTAATAATTGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACATTTCTTTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTCGGACAGGTTCGAGGATTTTATTATTATTATAATTTGACTTCGGGATTTTCTACCTTCACATTTTTATGAATAATTACAT ATGGGAGCGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTATGGTGCACCACAGATGACACAGTTTATGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTTAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGAGTTGCTGCTATTGACATTGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTACGTGCACTCTCATGTTGTTTGGTTTGTGCTCAATGATTCTGGTACAATAATCAGTGTCTGGACCTATTATGTAATAATTGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACATTTCTTTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTCGGACAGGTTCGAGGATTTTATTATTATTATAATTTGACTTCGGGATTTTCTACCTTCACATTTTTATGAATAATTACAT ATGGGAGCGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTATGGTGCACCACAGATGACACAGTTTATGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTTAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGA MGAVKMQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDILKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELNRLNAFIQGGY Homology
BLAST of Cp4.1LG05g10120 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.3e-90 Identity = 165/206 (80.10%), Postives = 184/206 (89.32%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12 Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy Swiss-Prot
Match: P50100 (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=MK0525 PE=4 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 6.9e-12 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy Swiss-Prot
Match: Q58069 (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0653 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11 Identity = 38/113 (33.63%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy Swiss-Prot
Match: P54606 (CBS domain-containing protein YhcV OS=Bacillus subtilis (strain 168) OX=224308 GN=yhcV PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. NCBI nr
Match: KAG7035332.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 409 bits (1051), Expect = 1.29e-143 Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. NCBI nr
Match: XP_022948090.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata] >XP_022948091.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata] >XP_023007248.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima] >XP_023533882.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023533883.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407 bits (1045), Expect = 6.42e-143 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. NCBI nr
Match: KAG6605374.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1045), Expect = 2.51e-142 Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. NCBI nr
Match: KAG6570609.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 394 bits (1013), Expect = 2.42e-137 Identity = 200/208 (96.15%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. NCBI nr
Match: XP_022986939.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima] >XP_022986940.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 392 bits (1006), Expect = 5.67e-137 Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy TrEMBL
Match: A0A6J1G8R5 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111451778 PE=4 SV=1) HSP 1 Score: 407 bits (1045), Expect = 3.11e-143 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy TrEMBL
Match: A0A6J1L768 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111499790 PE=4 SV=1) HSP 1 Score: 407 bits (1045), Expect = 3.11e-143 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy TrEMBL
Match: A0A6J1JHG9 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484529 PE=4 SV=1) HSP 1 Score: 392 bits (1006), Expect = 2.74e-137 Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy TrEMBL
Match: A0A6J1FUM7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448953 PE=4 SV=1) HSP 1 Score: 391 bits (1004), Expect = 5.54e-137 Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. ExPASy TrEMBL
Match: A0A1S3C2E8 (CBS domain-containing protein CBSX3, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496262 PE=4 SV=1) HSP 1 Score: 387 bits (994), Expect = 1.85e-135 Identity = 196/206 (95.15%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 331.6 bits (849), Expect = 4.5e-91 Identity = 165/206 (80.10%), Postives = 184/206 (89.32%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.8e-45 Identity = 96/206 (46.60%), Postives = 137/206 (66.50%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 35/128 (27.34%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 35/128 (27.34%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Cp4.1LG05g10120 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07 Identity = 29/101 (28.71%), Postives = 56/101 (55.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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