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Cp4.1LG05g10030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGGTCAGGAAGCCCTTGTCGATAAGATCGCTTTGGCCTCGTCCTCGTGCCTCCAAGCCCCGAAAGCGTTGGTCGTGGCTCTGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAGATGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCCCGTCCCCGTTGAGGGGGAGGAAGGTCGGGGAGACGACGAAGGGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATCATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTTGAAGAGCTTTTGTACTGTTGGAGGAATTTGAAGTGTCCTGTTTTTGTTGATTTGGTTTGTAGATTCTATGGAGAGCTTTGCAAGGATTTGTTTTCTCCCGACGATCAAGCTTACCCAATTAAACCATAA ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGGTCAGGAAGCCCTTGTCGATAAGATCGCTTTGGCCTCGTCCTCGTGCCTCCAAGCCCCGAAAGCGTTGGTCGTGGCTCTGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAGATGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCCCGTCCCCGTTGAGGGGGAGGAAGGTCGGGGAGACGACGAAGGGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATCATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTTGAAGAGCTTTTGTACTGTTGGAGGAATTTGAAGTGTCCTGTTTTTGTTGATTTGGTTTGTAGATTCTATGGAGAGCTTTGCAAGGATTTGTTTTCTCCCGACGATCAAGCTTACCCAATTAAACCATAA ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGGTCAGGAAGCCCTTGTCGATAAGATCGCTTTGGCCTCGTCCTCGTGCCTCCAAGCCCCGAAAGCGTTGGTCGTGGCTCTGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAGATGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCCCGTCCCCGTTGAGGGGGAGGAAGGTCGGGGAGACGACGAAGGGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATCATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTTGAAGAGCTTTTGTACTGTTGGAGGAATTTGAAGTGTCCTGTTTTTGTTGATTTGGTTTGTAGATTCTATGGAGAGCTTTGCAAGGATTTGTTTTCTCCCGACGATCAAGCTTACCCAATTAAACCATAA MKVEAALVSFKSKLSKPCKKLLHVFKFRVRKPLSIRSLWPRPRASKPRKRWSWLWWLRRGVGKMERVRELRGGRCLDGSREKLLFPSPLRGRKVGETTKGSSSAEEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRNLKCPVFVDLVCRFYGELCKDLFSPDDQAYPIKP Homology
BLAST of Cp4.1LG05g10030 vs. ExPASy Swiss-Prot
Match: Q84RF2 (Transcription repressor OFP17 OS=Arabidopsis thaliana OX=3702 GN=OFP17 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31 Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. NCBI nr
Match: XP_023534214.1 (transcription repressor OFP17 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362 bits (928), Expect = 3.67e-126 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. NCBI nr
Match: XP_022947769.1 (transcription repressor OFP17 [Cucurbita moschata]) HSP 1 Score: 345 bits (885), Expect = 1.58e-119 Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. NCBI nr
Match: KAG6605384.1 (Transcription repressor OFP17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 344 bits (882), Expect = 5.22e-119 Identity = 172/185 (92.97%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. NCBI nr
Match: XP_023007257.1 (transcription repressor OFP17 [Cucurbita maxima]) HSP 1 Score: 316 bits (810), Expect = 3.87e-108 Identity = 159/181 (87.85%), Postives = 166/181 (91.71%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. NCBI nr
Match: KAG7035338.1 (Transcription repressor OFP17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 303 bits (777), Expect = 2.50e-102 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. ExPASy TrEMBL
Match: A0A6J1G7V7 (transcription repressor OFP17 OS=Cucurbita moschata OX=3662 GN=LOC111451529 PE=4 SV=1) HSP 1 Score: 345 bits (885), Expect = 7.65e-120 Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. ExPASy TrEMBL
Match: A0A6J1KY64 (transcription repressor OFP17 OS=Cucurbita maxima OX=3661 GN=LOC111499796 PE=4 SV=1) HSP 1 Score: 316 bits (810), Expect = 1.88e-108 Identity = 159/181 (87.85%), Postives = 166/181 (91.71%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. ExPASy TrEMBL
Match: A0A6J1D7X1 (transcription repressor OFP17 OS=Momordica charantia OX=3673 GN=LOC111018093 PE=4 SV=1) HSP 1 Score: 247 bits (630), Expect = 5.88e-81 Identity = 135/181 (74.59%), Postives = 146/181 (80.66%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. ExPASy TrEMBL
Match: A0A5D3DSU1 (Transcription repressor OFP17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00290 PE=4 SV=1) HSP 1 Score: 231 bits (588), Expect = 1.77e-74 Identity = 133/184 (72.28%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. ExPASy TrEMBL
Match: A0A1S3CQ19 (transcription repressor OFP17 OS=Cucumis melo OX=3656 GN=LOC103502957 PE=4 SV=1) HSP 1 Score: 231 bits (588), Expect = 1.77e-74 Identity = 133/184 (72.28%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. TAIR 10
Match: AT2G30395.1 (ovate family protein 17 ) HSP 1 Score: 137.9 bits (346), Expect = 7.9e-33 Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = 0
BLAST of Cp4.1LG05g10030 vs. TAIR 10
Match: AT1G06923.1 (BEST Arabidopsis thaliana protein match is: ovate family protein 17 (TAIR:AT2G30395.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25 Identity = 66/177 (37.29%), Postives = 102/177 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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