![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG05g09740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTGCTCTGTTAGGCATCTCTGTAACAGCAACCGAACGGGATCCCAATCCAACGTCAGCTTCGTTTCCAGCTTCCGAATCCTGTGAACTTCTTCTTCTCAGGCTCTGCTAGTGTTTCGCTCAGTGCGGAATGAGGAACGTTCAGGTTGCTTTTCGAACCATTGGAGGTGGCATAATGAGGAAATTTAAGCAACCTTCTGCGCTCAGAAACCTTTCCACAAACGCCGCTCGAGGTAATTTTTACTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTNTTGAATCGCTGGATTTCTTACTTATACTGTGATTTCTGAAGTTCTTTTACCTAATGATTTGGCTGGAAATTTGTCAGGTTTATTGTTAAGACTATGTTGCTGAAATGTGTTTCGGTTTAGATCTTGTTTGTCCGAGTTTTTGCGTGAAAAACCTCATGTTTAGTTGTGTAATTGGTTAATGTGCTTCGAGGCATGTTTTTACATCTTTCGTTTTTTGAAAATTGTAAACAGATTGTAGTTTCGATGATGAGGGAAAATCCAATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGCGTATCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGTAAACCTCGTGAAAGAATCGGTTCAAGGCTGAGTGGTGGAAACAATTTTTAGGCGTTGTATGGTCTTGAAGATAATCTTAACACGCTGTCGGATGGGATGGATGGCAAGTTGAAGAAAGCTTCTACGTATTTTGAGTTTGATCCCGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCGGATATGTCCTTTAAACCTGGATCAACATACGAAATCAAGGCACGTAGCTGGGCAACTAATTGTTTTTATACTTGTTAAGAACAAATCCTTATCATTATTCATTTCATAACTTTTATTTATAATTACATCATGCCAATCCGAGCATTAGCACTTTTACCGTAAAAAATTTATAATCACATTACATCTACAAAACTACCTTTACTAGAATCAATCACGTCTTCTTCAAGAAGCATACTAGGTGAATTTTATGGCCAACTATGTCCGCATGGTTAGCATTTGGATTGGATGACCTGTGACGGAAATGAAGTTCACCTTCTGTAGATGATGATGTATGCTTAATGTTACGATTATTCTAAGTGCTTTTGAATTTATACAGGATCTGGATCTAACAAAGCCTGGTGTACGCAAACCTCCCAAAAGAGTTGAGTTTCAGGTGACGACGGAGGAGGTCTTAAGAAAAGCTGATTTCAGGGTGAGCATTCCTGAATTTCATTTACCTTGCCATTTTACTAATTCCCTTCTCATATCATTATTATAGCAAGGACCTGGAGTAAAACATGGTCGGAATTAATGGTAGCAGACCATTTGATCCTCTGCAACTTTTCATATTCCGTAGCTACGTAGTCGGATGTGGAATTTCTTATGATCAAACTTCTCATCTTTTAAATGTCATATGCTTATTTATAAACTCAAAGAAACAAATCTAGTCAATATGAGTAGTTTAGAACAGAAGGAGCCGTTGTGATTAGAAATTTGGTCTGTCATCCTAGAAACAGCGCAGTCATCAATAGCCATGGACCATCAAATTTTTTCTTTTTATATAAATTGCAGTTAATCAATTCATGGGTTCCTGATATGGGTAGTGCCTCTTTCTAGCATTTGATCGTTTGCAACATTAGAGAGGTCATGGAATTACCACTATCATTCTCATTGCTACCAGAAAATAGTTCGGCTATTAGTTGGTCTTTTTTGCCATTTAAATTATGTCCACGACTCTCTTGAGGAAGTTTATAATCCAGAGTACCTATCCAAGCTAAGAAAATATGTTCTTGGAGTCAAATTGCATTTTATCTCGCATATCTAACAATTAGCAAATAGATGTTTGCAGAATGTTAGGTTTCTGGCGAATTTTATTACCGATGCCGGGATCATTAACAAGAGGAGCAAGGTAAACTTTTCGAGCAAAACTCAGGTTTAGAACAAGTTGAGTCGTCAACCTTCATCTGACCTGATCACTTCAACAATTTTGCAGACAGGTATAAGTGCCAAAGCACAGAGGAAAGTTGCCCGTGAGATCAAAACAGCACGAGCTTTTGGCTTAATGCCTTTCACAACAATGGGAACCAAATCATTTGTTTTTGGGAAGACCATGGAGTATCTCGATAAGGACTATGAATATGAAGTTTTCGAGAATAATACCGATGCAGATAGAGGACGCCCACATGGTTCCTAGAGACCACGCTTTCAGATGGTCGAGAATTATACACGTTTTGCCTCTCTTCATAGCTGGTATGCATTTGCCGCCCTTGATCCAACCATTAGCTCGAGCATTACAGGGCTTGACTTTGTTTGATTGCCGATTACAATCATGCTTCAAGCCCCAGAATCCTGCAAATTTGTTGAAAGCAGGAAGGTATCGCAGAAAATTCATGGTGATCTTCATATTTCGATATTCCAAAATTTTGTTTTATGCATTGGTTTTGTGGTTAGAGGTCTCAATTACTGTAGTTTGCATATTTGTTGTTCTTTTACCGTATTAATATGTAAAGGGGTGAGGTAACTCATGATCAGCAGCCTGAAATTGGAGCAGTTTGTTAGTTAGTTCCATAGACATGTGGGGCATAATACAATGCTGGCCTTCGTGAAGAAGCTATTTGAGGAGGCTGGTACATTGTTTTATACCGCTGGATGTAGGGAATGATGGTTCAAACCAAAACGGTATAAAACACCAAAGAAAGCTTC TACTGCTCTGTTAGGCATCTCTGTAACAGCAACCGAACGGGATCCCAATCCAACGTCAGCTTCGTTTCCAGCTTCCGAATCCTGTGAACTTCTTCTTCTCAGGCTCTGCTAGTGTTTCGCTCAGTGCGGAATGAGGAACGTTCAGGTTGCTTTTCGAACCATTGGAGGTGGCATAATGAGGAAATTTAAGCAACCTTCTGCGCTCAGAAACCTTTCCACAAACGCCGCTCGAGTTCTTTTACCTAATGATTTGGCTGGAAATTTGTCAGATTGTAGTTTCGATGATGAGGGAAAATCCAATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGCGTATCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGTAAACCTCGTGAAAGAATCGGTTCAAGGCTGAGTGGTGGAAACAATTTTTAGGCGTTGTATGGTCTTGAAGATAATCTTAACACGCTGTCGGATGGGATGGATGGCAAGTTGAAGAAAGCTTCTACGTATTTTGAGTTTGATCCCGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCGGATATGTCCTTTAAACCTGGATCAACATACGAAATCAAGGATCTGGATCTAACAAAGCCTGGTGTACGCAAACCTCCCAAAAGAGTTGAGTTTCAGGTGACGACGGAGGAGGTCTTAAGAAAAGCTGATTTCAGGAATGTTAGGTTTCTGGCGAATTTTATTACCGATGCCGGGATCATTAACAAGAGGAGCAAGACAGGTATAAGTGCCAAAGCACAGAGGAAAGTTGCCCGTGAGATCAAAACAGCACGAGCTTTTGGCTTAATGCCTTTCACAACAATGGGAACCAAATCATTTGTTTTTGGGAAGACCATGGAGTATCTCGATAAGGACTATGAATATGAAGTTTTCGAGAATAATACCGATGCAGATAGAGGACGCCCACATGGTTCCTAGAGACCACGCTTTCAGATGGTCGAGAATTATACACGTTTTGCCTCTCTTCATAGCTGGTATGCATTTGCCGCCCTTGATCCAACCATTAGCTCGAGCATTACAGGGCTTGACTTTGTTTGATTGCCGATTACAATCATGCTTCAAGCCCCAGAATCCTGCAAATTTGTTGAAAGCAGGAAGGTATCGCAGAAAATTCATGGTGATCTTCATATTTCGATATTCCAAAATTTTGTTTTATGCATTGGTTTTGTGGTTAGAGGTCTCAATTACTGTAGTTTGCATATTTGTTGTTCTTTTACCGTATTAATATGTAAAGGGGTGAGGTAACTCATGATCAGCAGCCTGAAATTGGAGCAGTTTGTTAGTTAGTTCCATAGACATGTGGGGCATAATACAATGCTGGCCTTCGTGAAGAAGCTATTTGAGGAGGCTGGTACATTGTTTTATACCGCTGGATGTAGGGAATGATGGTTCAAACCAAAACGGTATAAAACACCAAAGAAAGCTTC ATGAGGAACGTTCAGGTTGCTTTTCGAACCATTGGAGGTGGCATAATGAGGAAATTTAAGCAACCTTCTGCGCTCAGAAACCTTTCCACAAACGCCGCTCGAGTTCTTTTACCTAATGATTTGGCTGGAAATTTGTCAGATTGTAGTTTCGATGATGAGGGAAAATCCAATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGCGTATCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGTAAACCTCGTGAAAGAATCGGTTCAAGGCTGAGTGGTGGAAACAATTTTTAG MRNVQVAFRTIGGGIMRKFKQPSALRNLSTNAARVLLPNDLAGNLSDCSFDDEGKSNSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNF Homology
BLAST of Cp4.1LG05g09740 vs. NCBI nr
Match: XP_022947027.1 (uncharacterized protein LOC111451027 isoform X2 [Cucurbita moschata]) HSP 1 Score: 181 bits (459), Expect = 2.95e-55 Identity = 94/107 (87.85%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. NCBI nr
Match: XP_022947026.1 (uncharacterized protein LOC111451027 isoform X1 [Cucurbita moschata]) HSP 1 Score: 181 bits (459), Expect = 1.12e-54 Identity = 94/107 (87.85%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. NCBI nr
Match: KAG6605412.1 (hypothetical protein SDJN03_02729, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177 bits (448), Expect = 9.01e-54 Identity = 92/107 (85.98%), Postives = 93/107 (86.92%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. NCBI nr
Match: XP_023007407.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111499912 [Cucurbita maxima]) HSP 1 Score: 171 bits (432), Expect = 1.24e-50 Identity = 91/107 (85.05%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. NCBI nr
Match: KAG7010502.1 (rpsR [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159 bits (401), Expect = 5.64e-46 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. ExPASy TrEMBL
Match: A0A6J1G5B3 (uncharacterized protein LOC111451027 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451027 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 1.43e-55 Identity = 94/107 (87.85%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. ExPASy TrEMBL
Match: A0A6J1G586 (uncharacterized protein LOC111451027 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451027 PE=3 SV=1) HSP 1 Score: 181 bits (459), Expect = 5.42e-55 Identity = 94/107 (87.85%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. ExPASy TrEMBL
Match: A0A6J1KYL3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111499912 OS=Cucurbita maxima OX=3661 GN=LOC111499912 PE=3 SV=1) HSP 1 Score: 171 bits (432), Expect = 6.01e-51 Identity = 91/107 (85.05%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. ExPASy TrEMBL
Match: A0A6J1FYC1 (uncharacterized protein LOC111448465 OS=Cucurbita moschata OX=3662 GN=LOC111448465 PE=4 SV=1) HSP 1 Score: 159 bits (401), Expect = 2.88e-46 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Cp4.1LG05g09740 vs. ExPASy TrEMBL
Match: A0A6J1JHF0 (uncharacterized protein LOC111484513 OS=Cucurbita maxima OX=3661 GN=LOC111484513 PE=4 SV=1) HSP 1 Score: 157 bits (397), Expect = 1.16e-45 Identity = 81/107 (75.70%), Postives = 86/107 (80.37%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|