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Cp4.1LG05g09650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE Homology
BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.0e-16 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.6e-12 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_023532325.1 (protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226 bits (576), Expect = 2.46e-74 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: KAG7035362.1 (Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211 bits (537), Expect = 2.18e-68 Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_023006797.1 (protein ELF4-LIKE 1-like [Cucurbita maxima]) HSP 1 Score: 137 bits (345), Expect = 1.45e-39 Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_022948227.1 (protein EARLY FLOWERING 4-like [Cucurbita moschata]) HSP 1 Score: 134 bits (336), Expect = 4.57e-38 Identity = 80/119 (67.23%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: KAF5751375.1 (hypothetical protein HS088_TW02G00388 [Tripterygium wilfordii]) HSP 1 Score: 115 bits (289), Expect = 2.79e-30 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A6J1KWT2 (protein ELF4-LIKE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499461 PE=3 SV=1) HSP 1 Score: 137 bits (345), Expect = 7.01e-40 Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A6J1G8L9 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451866 PE=3 SV=1) HSP 1 Score: 134 bits (336), Expect = 2.21e-38 Identity = 80/119 (67.23%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A7J7DYC8 (Elf4 domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00388 PE=3 SV=1) HSP 1 Score: 115 bits (289), Expect = 1.35e-30 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A067LNP8 (Elf4 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_08467 PE=3 SV=1) HSP 1 Score: 114 bits (285), Expect = 4.46e-30 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A7J7HN84 (Elf4 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_007156 PE=3 SV=1) HSP 1 Score: 114 bits (284), Expect = 8.90e-30 Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 ) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) ) HSP 1 Score: 80.9 bits (198), Expect = 7.8e-16 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 ) HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 ) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 ) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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