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Cp4.1LG05g09610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGTCGCACTGGATAATTCAATGAATCTGACCTATTCTGATAGCCAAGATCGAAGAAGAGAGGTGAAAAGGAAACCATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAAGCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCGAGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGTAAGAACACTCGACTCTCTGTTAGACTGTTAGATCCTTCGCCGTTTATTTGCCCTAATTTTGGAGGTATTTCTGAATTCTGATGAAAACGCTGCGAAATCGATTGACGTTCGGTTATTCTGCGAGCGAATCACTCGATGAAGAAAGAGGAGAGGCTGATTTTTCAAATTAAGCACTCAAATCACTCGATCGAAATCGAAACCGAAATCAAATTACTCGATGGAAAAGTTTCTCGGAACGATTGAATTTGTATCGTATTGTGCAATCGAGTTCGAAATCTGTGGGGAGTGCTTTTATTTTCCTTAATTGCAACGCCTCTTGTCATCGATTTGTCGTTTCAGGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCACCGTAATCTACGATGAGCCTCCACCAACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCAATGTTGATGTACGTATTATCCTCTCTTCTGCTACTCAGATTCACTTCACCAGCCCTAAAACAAACAAGCAAGAACGATTAAATCTAAATTGTTCGTGAAAATTGCAGGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCAAAAATGTGATTGAAAGTAGGGAAATTCATTTGAACACTGATTTTCTGATCCACCATTCTTGGCAGACATATAATCATATTCAAAATTTATATTGAGCATAGTTCGTTCATCACTACCGATGCTAAATTGTAGATTTATTGTTTTTTTTTTCTTTCAATTTAACCAAC TGCGTCGCACTGGATAATTCAATGAATCTGACCTATTCTGATAGCCAAGATCGAAGAAGAGAGGTGAAAAGGAAACCATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAAGCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCGAGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCACCGTAATCTACGATGAGCCTCCACCAACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCAATGTTGATGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCAAAAATGTGATTGAAAGTAGGGAAATTCATTTGAACACTGATTTTCTGATCCACCATTCTTGGCAGACATATAATCATATTCAAAATTTATATTGAGCATAGTTCGTTCATCACTACCGATGCTAAATTGTAGATTTATTGTTTTTTTTTTCTTTCAATTTAACCAAC ATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAAGCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCGAGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCACCGTAATCTACGATGAGCCTCCACCAACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCAATGTTGATGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCAAAAATGTGA MEKAKQLLELTPEEADAVEKLDGRRNIAGDSCFYTFFSFRGIRVNRVEPGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGSTVIYDEPPPTLVSVDISIAYLSTANVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM Homology
BLAST of Cp4.1LG05g09610 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. NCBI nr
Match: XP_023532314.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303 bits (776), Expect = 1.22e-103 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. NCBI nr
Match: KAG6605429.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035378.1 Acyl-coenzyme A thioesterase 13 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295 bits (756), Expect = 1.37e-100 Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. NCBI nr
Match: XP_022948156.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]) HSP 1 Score: 294 bits (752), Expect = 5.59e-100 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. NCBI nr
Match: KAG6570673.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231 bits (588), Expect = 6.33e-75 Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. NCBI nr
Match: XP_022943771.1 (uncharacterized protein LOC111448424 [Cucurbita moschata] >KAG7010519.1 Acyl-coenzyme A thioesterase 13 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231 bits (588), Expect = 8.27e-75 Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy TrEMBL
Match: A0A6J1G8H0 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111451820 PE=3 SV=1) HSP 1 Score: 294 bits (752), Expect = 2.71e-100 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy TrEMBL
Match: A0A6J1FSM4 (uncharacterized protein LOC111448424 OS=Cucurbita moschata OX=3662 GN=LOC111448424 PE=3 SV=1) HSP 1 Score: 231 bits (588), Expect = 4.00e-75 Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy TrEMBL
Match: A0A6J1JFG8 (uncharacterized protein LOC111484536 OS=Cucurbita maxima OX=3661 GN=LOC111484536 PE=3 SV=1) HSP 1 Score: 229 bits (583), Expect = 2.31e-74 Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy TrEMBL
Match: A0A6J1D5C3 (acyl-coenzyme A thioesterase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017075 PE=3 SV=1) HSP 1 Score: 227 bits (579), Expect = 6.96e-74 Identity = 118/154 (76.62%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. ExPASy TrEMBL
Match: A0A0A0KH68 (Acyl-CoA thioesterase OS=Cucumis sativus OX=3659 GN=Csa_6G187990 PE=3 SV=1) HSP 1 Score: 224 bits (571), Expect = 1.23e-72 Identity = 116/153 (75.82%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. TAIR 10
Match: AT2G29590.1 (Thioesterase superfamily protein ) HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39 Identity = 83/150 (55.33%), Postives = 103/150 (68.67%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein ) HSP 1 Score: 95.5 bits (236), Expect = 4.0e-20 Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 0
BLAST of Cp4.1LG05g09610 vs. TAIR 10
Match: AT3G16175.1 (Thioesterase superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11 Identity = 32/107 (29.91%), Postives = 59/107 (55.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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