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Cp4.1LG05g09390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTCTTTATTCTCTCTTTCTTGTCCGCCTCTCTCCTCTTCCCCTTTCTCTCTCCTCCTTCTCTCTCTTCTCTCTTCTCTCTTCGTCTTCTCGTTTACCTTCTCCCTCGCCTCGTCTGCCCTTTTACTTCACAGAACTCTACAAATCCAAGAAGTTCGTACGGATCGTATGGATCTTGTTTCTTGATTTTTCTCTCCAATTTTCTCGGAGTCTCGATTCTGGGGTTCGCTAGTGGAGGGAATCGGAGGTAGACAGAGCGAGGCGGATCCGTTATGACGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCAACGAGTTCGTTGATAATGGTCCTGGAGAGGATGTTCTCAAGGAGCTTCAAGGAGTAATTATTGATCTCCAATCTTGAAAATCGTGTTATTCTTCTTTGCTTTATACTCTTAGCTTCTCTAGTAAAATGAACATTTGCCTTTTTTTTTTTGTTTGTTTCTTCAATCTATTTGAAGGAATCCATAGAATTTTTCCGGTGATCACCGTCGGGTTTTGATCCGATTCTTTCTAGGGTTTTGAAGCTAATTTAAGCTGTGGTTGGGCTGATTGTCTTTGTTTATGGGAACTTTTAGATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTAACCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCAATAACTCCGGTTCACGATCTCAATGTTCCGTACGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATCTACTCTTTCCACCGGTTAGTACTTCTGTCCTCTCCACTAAATGGTTTCCGAAGTTCGTATTTAATAATCGAAGCGATTTTGGAAATTGTAGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGGAATGTATAACATTCCTACTGGACCTAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGTGCTAATAATGTTGATGTCAGATCTGGAAGGCCAACCCCGTTTATGGTAATTACTGCTTGACTCTGGTTCCACTGCCACTCTTTATATTTTCTCATTTCCTGCAGTTTACCCGATCCATACTGTCATGATTGCTGTATTTTCTTCAAAAAGGAATGGTTATATGTAGTCATGGTGGCTGTTAATTTGATTTAAAGTGGAAGAATGGCATAGATATGATTTTTGCCATCAACATTTTGAAGTATTTTGTTGATAGTTGAACATGACGTCAATTGGGGTATTTGACAAACGTCTACATTATTGTTTCAGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGGTGAGTTTATTGTTGAGGCAGTGAAAAAGTTACCACACCAAGAATTCTGCAGTAATATATATTGATTGCACTTTGTAGCCTATGTGGAGGGGCGTGAGGAAACAGACAGGGGAGCTGCTCACCCATCCCTTACACAGGTAACTCCTTTCTCATCTCACTCTTCCATCATGAAAAAGTTTGTTGCCTAATGTGAAACCCAAACCTTCCCTGTGAATTTCATCTGCTAAAGTGATTTCAAATTACTCAACTCCTTGCTGCCATATATCTAGCGGCACACACTTCAGTATGATGTTTTAACTTAGGGAGACAATTTTCAGGACTTTTTCACGATGAATGCTGGGAAGCGAAAGCGTGATGATTTTGCATCCCAGTACCAGACTAGTGGGTTTATACCGCAGCAAGATGGAGCTGTAGATGCTGACAGTAGTGTCTTTGAGATTGAGGTTTTGTTTCCTTACCTACAGTCAGTGCTCGTATATTTTTTTTTCCGGCCTTGGACTTGTATGCCAATTTTCTTTTACATAATTTCAGTTTCTAGTCTTTTGTGAGCACGAGCTAGTAATAGCAACAACCATAACAACATTCTCTATTTTTCTTTTCTTTCACTAGGGTGGATGCTTATAATTCTTTTTCCAGCACGATTGGTCATGTACATGATATATTGAGACATTCTAACACATGGAGTCAAGCTACTTCCAAATAAGCTAAGGAATGTAGTAATTCCACTTCATTTCAAGGAAACCTTTCTTTTATGGGAATTTAAGGAGACCTTTTAAACACATATTTTTGGTTTACGTGTATATGATACAAAATCAATATTTGAGGTGGAAACTTCTACTGCTATTTTCCATTGCTATCAAAAACCACTCAAAATGAATTTCACCTTGGAGAGGAAAGCAACTAACCTGGGTTGATTTTGTGGTCAAGAACGGCCAATGTAAATAATAAAAGACTTAGTTACCTTGGCAACTAAATATAGTAGGGTTACATGGTTGTCCTTTCAGAATGGTCGAGATGTACACATACTGGCCCAGATGCTAACAAATATTAAAAGAAAACATTGGAGGGAAAGCGACAATTTTATATTCAAGCTCAGCTATACATGCATTCTCTTTATGTAAATTGAAAAATCCTAAACTATTTGAGCGGCCTATTCTTTTGTTTTCGAGCTGATTCTAGTTTTCAAATGCCCTAAAAAATTGTCAATGATTATCTTAAATACTTATCTTGCTAACAAATGCCAACGTGGGGATGCTCTATGCCAACCTCCAAGTCATCCGCTAATGGAACTAACAACTAACTGCCTTATCTTGCTTACAGATTTGGCTCCCTCAATTCACCAGCTTGCTTATGCTGCCTCACGTATGTAATGTGGATTGTAGGTTGCTAGTGTCTATAAGAGAAATTAGAAATCTTAGAACTCTTTCTCGATGCCTTACATTCTTGACTGTAAATTCTGACCCTTATATTCTCTTAAAACTCAAAACTTTTTTCGGTGTACTAGACTCTGAGGGCACAAGATAATCTAGGAAGACAAGTTAAGTGGTGGTGGTTCTTCATTGTGGATAGAGCTAGAAATGGCTATCTGTTTCAGATCTAATTTACGGGTTGAACAATTTGTGTTGCTATTTGAATTTGCTAGAGGTCAAGGCAATCCTCCTAGGTGTCTATTTTAGAGGAACTGTTTGCAAAGGCTGCACTATGATCTGTGGCATTTGGATCTTCAGTCATCTTCTCAATGAGGCTGTCTATCTTTTCTAACTATGAGACCCCAATCCTCTGACCACCCGAAGTTATGAGCTAAGAAGCATGGAAAATAAAAGACATGGACACGCCTTAATTTCTAAAAGTCTAGGATAGGATAGGGCATTCACAATTATTCCAACTTAATTAAGATATATATATTATTTTTAAGTTAACACACACACACACGCACTTCAATGATTCTCATACTTGAAGTTTGTCTTAGTTTATGATCCTTATGCTTTTATGATACAATATTATATGTCGATATTCATGGATACATCCCACTAACTAATCAAATTTTATAGGAAACCAACTTTCATTAAGAAGATGTCCAAGGAGGAGATTTGGAATATAATTAGGCTTAATACCTCTTTGTAGGTCTATTTGTAAGGTTCTTTGTAATGGGGAGGGAGTCCCATTTCAGTAGTTAGACTCATCATCCTTGAAGGTTTTAACAAGAAACATAGCGTGGGACTTCTTTTGTCGGGCTGTTGCTTTTGTGTGCCCTTGCATATTCTTTCATTTCTATATGAGTGAAAACTAGGTTATAAAAAAAACTTCAAAATACGAGGAAAGATCCACTGAAATACCGGTCTTATGGAAGCAAGGAAATTCTTTCATTTTTCTCAATGTTAGTGAAAACTTGGCTTTTTACTGAGAGAAACTTTCATTAAGAAGATGAAAGATTAAAATGCATGGATAGAGGATTACATAAAGGGCTCGCAAATCTTTGTAACAAAAAATAGAGAATAATTATGAAAAAGTTCAGAATTGAGAGACCTATGAGAAGTATTAAAAAAAGTCACTTTCCAAACATTTTCCCAAGTAACTCTTTCTTTCGAGGAACACTTTCCTTTTCCTTTCCCGCTAGATAAATCACAAAATAACTTAATCCATGTGCCAAAAAATCCCTCCCTTGGAATGAAGAATTCTCCACAGCCTTTCCTAACGCCTCTTGAATGCTCTATCTCTGCATAACGAACAAACTTATCAATTTTTTAAGTGATCTAACATCTTAACAAAATGTAAATTTAAATTCGATTCTGCTTTTGCGTTGATTAATACTGTTTTTTCTTTGTCACGTAATGCAATTTAATTTCTCTTTTCATCTATGCTGATTGTATATGTCCTATATCTGCTGCTGTAGTTTCTAAGAGTTAGAATATTTTAGCTTGTTTGACGAATTTTTGAAAATTAAACCATTAACAATTATGATTTAATAGAACTGACGTGATTAAATTTTGCTGAATGCCTTTTAAATTGTGATCGGTCTTTGAAACTTCATAGTGGTAAGCTTTTGCAGATAAGTGGATGCAATGCTTCTGATGGGATACCTGACTTTAGCACTTCTGCAAACAATGCAACATCATCACGTATTGCAAGATCATTATTGAAAATTCCTCAACTTGATGGACCAATGCCTGATCCTTATGATGATGAGCTTTCGACACCCAATGTTAGCTCTCTCTCTCCCCTCCCCTTAAAGGTTTTACAAGTGTGTATTTTTAAAGCAATGGACTATTTATATAACTAAAACATAAATTTTATACTTTTACCCTTCTTGTCATGGATATCATTGAAGCAAGGGATTGTTTGTTTGGGATTAGAACCTTCCTGAATGAAAACAAATTGAAACATGTTGAATTGCATGCTCAGTCACAAAATAAACAAGAATTTGTTTAACCAAGAATTTTTGTAGTGCGATTTACTGGCTTCTTTCTAATTATTAATATTAGAGCTTATGAAGGTGATTGACTTTTGTTGTCGATGGAAGACAAAATATCATTCTAATAATTATCAAGGTTCCGTGTTGGCTAAAATAACAAGCAAGAATATGACCTGGTGACTGACACTAAAATAGCTTCGTGAAATATGCTTATTTAAACAGCAACAGATAAACTTCATTCTTGCTCTTGGTTAAAGACGCTAGTGAATGTTCCCTCTAGTTGTTTATCAAGTAAAGAAACAAAATTATAGCTCGTAGATAAAATCCCAATCAATCTGTACATTTCAGAGGTGTTCCTGGATCTGCACATTTTCTATGGTCAAGATAGTTCACTGTATGGTCAAATCAAATAAGAAGTTATTTCCCTTTCTTGTCATAATTAATTACTTGTAACACGGGATTTCTTTGCTCGCTATATTGGATATGCTGCCTACAATTGTTCGATTCTTCTGATATCTGTTGTGTTCATCCTGTGCGTTTCCTGGGTGATTTTTTTATTCAAGTTTTAGTTCACTGTGTGGCCAAATCATTTAAGAAGCTATTTCCCTTTCTTGTCACAATTAATACTTGTAACACGGGATTTCTTTGCTCGCTATATTGGATATGCTGCCTACAATTGTTCGATTCTTCTGATATCTGTTGTGTTCATCCTGTGCGTTTCCTGGGTGATTTTTTTATTCAAGTTTTAGTTCACTGTGTGGCCAAATCATTTAAGAAGCTATTTCCCTTTCTTGTCACAATTAATACTTGTAACACGGGATTTCTTTGCTCGCTATATTGGATATGCTGCCTACAATTGTTCGATTCTTCTGATATCTGTTGTGTTCATCCTGTGCGTTTCCTGGGTTGATTTTTTTATTCAAGTTTTAGTTCACTGTGTGGCCAAATCAAATAAGAAGTTATTTCCCTTTCTTGTCACAATTAATTACTTGTAACACGGGAATTCTTTGCTCGCTATATTGGATATGCTGCCTACAATTGTTCGATTCCTCTGATATCTGTTGTGTTCATCCTTCCTGGGTTGATTTTTTTAATCAATGAGATGGATACTTTTCTTTGAGATTGAAATCCTGAAATCATAATTAATGAAAATGTTGTTCCTATTGCTCTCCTTCCACTGAGTTTATTTTTTGTTTTATCTTTCCATAAAACTTATTCAACATTTCTGACATCTTTTGCAGATCTACAATTACCAGGGTGTCTTTAATGAAGACTACAACATTGCAAATACACCAGCACCTAATGGTAAATTTTGTAAAGGATGTCTTGATGATAGTGATTGTTTATGGAAAGGACGAAAATTTTGTTGTTTTTTTTATTGTCATTGGAAAAAGATACTAAACGAAAGGTTTAAGTTCAATTTCTGTTATGAACTTCCACATCTAAATACTTTGGCATGGTCTCTCTAAGTTTTCATAAATTTGTTATGGTTTTTCTTGTTAAACTTTTGCATTGTATTTAATGGAAATCTTTAAGTCGCCCTTTTTAAAACTTGTTATCTGACATCAATGATATGTGTTGTTTATATTAACTTTTATGATGTGTTATCAAAATTTAGCGATTGGATTATATGTAATTTAAGGATCAGAATTGAACATTTGAAAGAATAAAAAACATCAGAACAAGGATGAAAGCTAAGGTTCCTAATGTTAACATGTTGTCTGTTACTTCTTCTTGACAGACCCACCAGCTGGCACTCCTGCCGTTGTCGTTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAATGAGGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTACTTTAGTCCTGGTTGGTAGGTGCGGGTTCAGCATATGCTTGAGCATTTGGTTTTGAAATTCTCAGAATTTAATGCACCATTGGATTAATTTTATGTGAAAGGTTACTCGGACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATCATGCATATTAACAATAAGGACATTCTCTTCAACAAGGTGAATTCCCCCCCTCTCCCAAAACTACAAGTTATAGATATTAACCGACCTCGGTTTTCATGTAAGCTCGTTTCTTTGCAGGCGACTGGGGAATTCGACTTCTGATTTTTAATGTAGGTGCACCTTCATCGGTCGGTTATCGGTAGGAGCAGTGTTTCAAAAGAATTCCAGGAAGTTGGTTCATTGGGTGTTTAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCAGGAGGGAAAATGACATGTTGATTCCTTATTATCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGGATGAGAGCTCTTTCGGCCTTCAATGCATATCATATGGCAACTTGAGGATTTTCGACCAAATTTGTCATTGCTCTAATGGAATTTATTTGTAACTTCAACCCCCTTTTCT CACTCTTTATTCTCTCTTTCTTGTCCGCCTCTCTCCTCTTCCCCTTTCTCTCTCCTCCTTCTCTCTCTTCTCTCTTCTCTCTTCGTCTTCTCGTTTACCTTCTCCCTCGCCTCGTCTGCCCTTTTACTTCACAGAACTCTACAAATCCAAGAAGTTCGTACGGATCGTATGGATCTTGTTTCTTGATTTTTCTCTCCAATTTTCTCGGAGTCTCGATTCTGGGGTTCGCTAGTGGAGGGAATCGGAGGTAGACAGAGCGAGGCGGATCCGTTATGACGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCAACGAGTTCGTTGATAATGGTCCTGGAGAGGATGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTAACCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCAATAACTCCGGTTCACGATCTCAATGTTCCGTACGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATCTACTCTTTCCACCGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGGAATGTATAACATTCCTACTGGACCTAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGTGCTAATAATGTTGATGTCAGATCTGGAAGGCCAACCCCGTTTATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTATGTGGAGGGGCGTGAGGAAACAGACAGGGGAGCTGCTCACCCATCCCTTACACAGGACTTTTTCACGATGAATGCTGGGAAGCGAAAGCGTGATGATTTTGCATCCCAGTACCAGACTAGTGGGTTTATACCGCAGCAAGATGGAGCTGTAGATGCTGACAGTAGTGTCTTTGAGATTGAGATTTGGCTCCCTCAATTCACCAGCTTGCTTATGCTGCCTCACATAAGTGGATGCAATGCTTCTGATGGGATACCTGACTTTAGCACTTCTGCAAACAATGCAACATCATCACGTATTGCAAGATCATTATTGAAAATTCCTCAACTTGATGGACCAATGCCTGATCCTTATGATGATGAGCTTTCGACACCCAATATCTACAATTACCAGGGTGTCTTTAATGAAGACTACAACATTGCAAATACACCAGCACCTAATGACCCACCAGCTGGCACTCCTGCCGTTGTCGTTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAATGAGGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTTACTCGGACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATCATGCATATTAACAATAAGGACATTCTCTTCAACAAGGCGACTGGGGAATTCGACTTCTGATTTTTAATGTAGGTGCACCTTCATCGGTCGGTTATCGGAGGGAAAATGACATGTTGATTCCTTATTATCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGGATGAGAGCTCTTTCGGCCTTCAATGCATATCATATGGCAACTTGAGGATTTTCGACCAAATTTGTCATTGCTCTAATGGAATTTATTTGTAACTTCAACCCCCTTTTCT ATGACGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCAACGAGTTCGTTGATAATGGTCCTGGAGAGGATGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTAACCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCAATAACTCCGGTTCACGATCTCAATGTTCCGTACGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATCTACTCTTTCCACCGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGGAATGTATAACATTCCTACTGGACCTAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGTGCTAATAATGTTGATGTCAGATCTGGAAGGCCAACCCCGTTTATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTATGTGGAGGGGCGTGAGGAAACAGACAGGGGAGCTGCTCACCCATCCCTTACACAGGACTTTTTCACGATGAATGCTGGGAAGCGAAAGCGTGATGATTTTGCATCCCAGTACCAGACTAGTGGGTTTATACCGCAGCAAGATGGAGCTGTAGATGCTGACAGTAGTGTCTTTGAGATTGAGATTTGGCTCCCTCAATTCACCAGCTTGCTTATGCTGCCTCACATAAGTGGATGCAATGCTTCTGATGGGATACCTGACTTTAGCACTTCTGCAAACAATGCAACATCATCACGTATTGCAAGATCATTATTGAAAATTCCTCAACTTGATGGACCAATGCCTGATCCTTATGATGATGAGCTTTCGACACCCAATATCTACAATTACCAGGGTGTCTTTAATGAAGACTACAACATTGCAAATACACCAGCACCTAATGACCCACCAGCTGGCACTCCTGCCGTTGTCGTTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAATGAGGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTTACTCGGACCAAGAGTAGGTGGAAATGTACACTAAAGGATGGAATCATGCATATTAACAATAAGGACATTCTCTTCAACAAGGCGACTGGGGAATTCGACTTCTGA MTTSTSSIYINVIEDVINKLRNEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNGMYNIPTGPSDHSASGTDASPAATTPGGSANNVDVRSGRPTPFMQPPSWMGQRTPVDVNIAYVEGREETDRGAAHPSLTQDFFTMNAGKRKRDDFASQYQTSGFIPQQDGAVDADSSVFEIEIWLPQFTSLLMLPHISGCNASDGIPDFSTSANNATSSRIARSLLKIPQLDGPMPDPYDDELSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVVQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF Homology
BLAST of Cp4.1LG05g09390 vs. ExPASy Swiss-Prot
Match: Q9USU9 (Transcription initiation factor IIA large subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=toa1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.0e-12 Identity = 105/426 (24.65%), Postives = 165/426 (38.73%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy Swiss-Prot
Match: Q54G80 (Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2a1 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.5e-10 Identity = 59/184 (32.07%), Postives = 89/184 (48.37%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy Swiss-Prot
Match: O08949 (Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.8e-09 Identity = 102/435 (23.45%), Postives = 165/435 (37.93%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy Swiss-Prot
Match: P52654 (Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIA-L PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 2.4e-08 Identity = 96/431 (22.27%), Postives = 167/431 (38.75%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy Swiss-Prot
Match: Q99PM3 (Transcription initiation factor IIA subunit 1 OS=Mus musculus OX=10090 GN=Gtf2a1 PE=1 SV=2) HSP 1 Score: 60.8 bits (146), Expect = 4.0e-08 Identity = 102/436 (23.39%), Postives = 167/436 (38.30%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. NCBI nr
Match: XP_023532247.1 (transcription initiation factor IIA subunit 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 788 bits (2036), Expect = 2.29e-287 Identity = 398/412 (96.60%), Postives = 398/412 (96.60%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. NCBI nr
Match: XP_022946939.1 (transcription initiation factor IIA subunit 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 787 bits (2033), Expect = 6.55e-287 Identity = 397/412 (96.36%), Postives = 398/412 (96.60%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. NCBI nr
Match: KAG6605439.1 (hypothetical protein SDJN03_02756, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 783 bits (2022), Expect = 3.11e-285 Identity = 395/412 (95.87%), Postives = 396/412 (96.12%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. NCBI nr
Match: XP_023007009.1 (transcription initiation factor IIA subunit 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 782 bits (2019), Expect = 8.91e-285 Identity = 394/412 (95.63%), Postives = 395/412 (95.87%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. NCBI nr
Match: KAG7035387.1 (toa1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 777 bits (2006), Expect = 7.31e-282 Identity = 399/455 (87.69%), Postives = 402/455 (88.35%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy TrEMBL
Match: A0A6J1G5C0 (transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450969 PE=3 SV=1) HSP 1 Score: 787 bits (2033), Expect = 3.17e-287 Identity = 397/412 (96.36%), Postives = 398/412 (96.60%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy TrEMBL
Match: A0A6J1L3S0 (transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499632 PE=3 SV=1) HSP 1 Score: 782 bits (2019), Expect = 4.32e-285 Identity = 394/412 (95.63%), Postives = 395/412 (95.87%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy TrEMBL
Match: A0A1S3CM61 (transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502057 PE=3 SV=1) HSP 1 Score: 723 bits (1867), Expect = 7.02e-262 Identity = 370/415 (89.16%), Postives = 379/415 (91.33%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy TrEMBL
Match: A0A0A0KE66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1) HSP 1 Score: 721 bits (1862), Expect = 5.97e-259 Identity = 371/416 (89.18%), Postives = 380/416 (91.35%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. ExPASy TrEMBL
Match: A0A6J1G5F3 (uncharacterized protein LOC111450969 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450969 PE=3 SV=1) HSP 1 Score: 712 bits (1838), Expect = 3.80e-258 Identity = 358/373 (95.98%), Postives = 359/373 (96.25%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. TAIR 10
Match: AT1G07470.1 (Transcription factor IIA, alpha/beta subunit ) HSP 1 Score: 444.5 bits (1142), Expect = 9.2e-125 Identity = 246/421 (58.43%), Postives = 301/421 (71.50%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. TAIR 10
Match: AT1G07480.1 (Transcription factor IIA, alpha/beta subunit ) HSP 1 Score: 442.2 bits (1136), Expect = 4.6e-124 Identity = 247/416 (59.38%), Postives = 306/416 (73.56%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. TAIR 10
Match: AT1G07480.2 (Transcription factor IIA, alpha/beta subunit ) HSP 1 Score: 442.2 bits (1136), Expect = 4.6e-124 Identity = 247/416 (59.38%), Postives = 306/416 (73.56%), Query Frame = 0
BLAST of Cp4.1LG05g09390 vs. TAIR 10
Match: AT5G59230.1 (transcription factor-related ) HSP 1 Score: 74.7 bits (182), Expect = 1.9e-13 Identity = 37/80 (46.25%), Postives = 62/80 (77.50%), Query Frame = 0
HSP 2 Score: 63.2 bits (152), Expect = 5.8e-10 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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