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Cp4.1LG05g09330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCACCACCTTTTTCGGTCGCATTTTCCAGTCAGGCTTGTAAAGAAGCAACGTCAAACCCCCACAGACGACAGCCCCATCAATCCCCTCTCTCCTTCTTCTCTCTGTTCTGTCTGTAACTTCCCTCATTAAATTCTCTCTGCTTAATTCATTCCTCTTTCTTCCTTCGATTTTTCCGTCAATCCTCTCTTCATAGTCAACCTTCTTTCCAATCCAATCTCAACTCCTCCATTTCTTCGCCAACCAACAGGTTTCAGTTCTTCCTTCGATTTTGGGGCTTTTCTTGCCTCTTCGCCTTTTCGTTTCAGCTACTGTGTAGACGATTCCGATTTTCTCGGTTTTGGTTTCTGAATTGCGGAATTTCTTGTTTGGATCAGGTTTGTTCGAGAAATCTGGGGCGGAGACGGCCATGGCTCATAAGGTGGACCACGAGTATGACTATCTCTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCCACCAGGACTCTCGAGGTAGATGCTTAATCGATTCAACTCTCAGCATTTTTTATTCGATTTGCGCGTTTTTTAATTAGCATTTGTTTTAATTTCTTCATTGATCGATTGAGTTTCCTTTTGTGATTGACGAACTTTGAAAATCTAGGTTCCGATGATTTCTAGATGGCGGCTTGCGCCTTTGTTTTCCCTTTCAATCGTTAAAGTACAGTGGATTAATTGCATGAGGAGTTCGAGTAGTAGTTACTTTCTTGTTTGAAAGCCACAAACGTTAAGGCTTGAATTAATAGTTGCTGAATTTATTCAATATAAATAATACGTTTCTCATATATGAAGGAAACGATCTAGGTTTTGTAGCCATGTCTACGGAAGACTGAGAGACGATGAAACCATGTGTGCTCAATTATTAAAAAGTATGGCTGCGAGTAGTTAGAGCAGGGAGAAATTGATTGAATTCTTTTCCTGTATTTCTAAGTCACCCTCATTTCTTACCAACTTATCAACCACCATTGCTTATTTGAGTATACCACTAACTTTGTAAATGCTCATGCTCTTGCAATTTTGAGTGTTTTTGTTAAAAAAGTAGAATTAACGAAGTTGGGGTTGTTCATTTAGAAAGTTAAGTATGTTTAGTCTACTTAAATATAGCTCAATTGGTTGAGCCATGTATCATCGACCAAGAGCTTAAAGGTTCGACTCTCCGCGTCACAAATAAAAGTTAGGGTATGCCTACCCTATTGTGGCCAAACCAATAGCTATGGTAGCTCTAGCATTAAATATTATACCAACTCTAGGAACTTTTTGGCTGAGGGATTGCTGTTTTTCTTGTGAAATGCTTAGTAAATGAAGCTAAGATTCATAATTTTTTAAGGGAGTTTGAGATCTCGAACTAAAATTATCGTGGAATCATATACATTTAGAATCTGTTCCTACTGTTTCTTTTTGTTCTTTACTCAAAATTCTGTTGTAAAAACTTGCATACGGAAGGCTAATGAACTGGAGGGTTGTCCTCAGCTAACTGGGAAATCATTATTGAGTCTGAGATTCTTTTTCATTTCATTGTTTTGTAAACTTGGTAGTTAAAAGTGTTTGTCATCTCATTGTAGTCAATGTTATTGTCATACAGGTAGAAGGTAAGACAGTCAAGGCTCAGATCTGGGACACAGCGGGTCAGGAACGATACCGTGCCATTACGAGTGCGTACTATAGGGGAGCTGTTGGTGCTCTCCTCGTTTATGATCTCACAAAGAGACAGACTTTTGATAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATAGGAAACAAATCCGACCTAAATCATCTAAGAGCTGTCTCAGAGGATGATGGACAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATCGAGACGTCGGCTTTGGACGCCACAAACATTGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCGAGTGTCCCCCATCCTGGTCAAGGAACCACCATCAACGTGACCGAAACTTCTGGGGACTCGAACAGAAGGGGTTGCTGCTCATCTTGAGGCGACACAGAAAGATAGAACTGATAGTTCACATCAAAGGTTTCTCTCTGGTGTTTCTCTTTTCATAATTGATCTGTTGTTTTTGATCTTCTTCCGGATTTGGAGAAACTAGGAAAATGTAGTGTATTATCATTCATAGCGGGCATGTAGAATGAATATATCTCACCCGATCCCTCCCTCTTGATCCACTGTGTTAGTTCTTTTCAGCAGTTTCAAATTTTTTACCTTGTTCCCTTTTACTTACCCATTCATATAACAATTACTTGGGAAATTTGATCTGTATTTGTTCTCCATTTGCAACTCTTACTCAGAAATTCTTACAGATATGAGACATGTGAGATTACTAGCTCTGTGTGTGTGTGTGTGTGTGTTCATTACTGATTGGCTCTTCTTTTGAGTTAGCATTTTAGGGGCAT CTCCACCACCTTTTTCGGTCGCATTTTCCAGTCAGGCTTGTAAAGAAGCAACGTCAAACCCCCACAGACGACAGCCCCATCAATCCCCTCTCTCCTTCTTCTCTCTGTTCTGTCTGTAACTTCCCTCATTAAATTCTCTCTGCTTAATTCATTCCTCTTTCTTCCTTCGATTTTTCCGTCAATCCTCTCTTCATAGTCAACCTTCTTTCCAATCCAATCTCAACTCCTCCATTTCTTCGCCAACCAACAGGTTTGTTCGAGAAATCTGGGGCGGAGACGGCCATGGCTCATAAGGTGGACCACGAGTATGACTATCTCTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCCACCAGGACTCTCGAGGTAGAAGGTAAGACAGTCAAGGCTCAGATCTGGGACACAGCGGGTCAGGAACGATACCGTGCCATTACGAGTGCGTACTATAGGGGAGCTGTTGGTGCTCTCCTCGTTTATGATCTCACAAAGAGACAGACTTTTGATAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATAGGAAACAAATCCGACCTAAATCATCTAAGAGCTGTCTCAGAGGATGATGGACAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATCGAGACGTCGGCTTTGGACGCCACAAACATTGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCGAGTGTCCCCCATCCTGGTCAAGGAACCACCATCAACGTGACCGAAACTTCTGGGGACTCGAACAGAAGGGGTTGCTGCTCATCTTGAGGCGACACAGAAAGATAGAACTGATAGTTCACATCAAAGGTTTCTCTCTGGTGTTTCTCTTTTCATAATTGATCTGTTGTTTTTGATCTTCTTCCGGATTTGGAGAAACTAGGAAAATGTAGTGTATTATCATTCATAGCGGGCATGTAGAATGAATATATCTCACCCGATCCCTCCCTCTTGATCCACTGTGTTAGTTCTTTTCAGCAGTTTCAAATTTTTTACCTTGTTCCCTTTTACTTACCCATTCATATAACAATTACTTGGGAAATTTGATCTGTATTTGTTCTCCATTTGCAACTCTTACTCAGAAATTCTTACAGATATGAGACATGTGAGATTACTAGCTCTGTGTGTGTGTGTGTGTGTGTTCATTACTGATTGGCTCTTCTTTTGAGTTAGCATTTTAGGGGCAT ATGGCTCATAAGGTGGACCACGAGTATGACTATCTCTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCCACCAGGACTCTCGAGGTAGAAGGTAAGACAGTCAAGGCTCAGATCTGGGACACAGCGGGTCAGGAACGATACCGTGCCATTACGAGTGCGTACTATAGGGGAGCTGTTGGTGCTCTCCTCGTTTATGATCTCACAAAGAGACAGACTTTTGATAACGTGCAAAGGTGGCTTCGAGAGCTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATAGGAAACAAATCCGACCTAAATCATCTAAGAGCTGTCTCAGAGGATGATGGACAGGCCATGGCTGAGAAGGAAGGCCTTTCATTTATCGAGACGTCGGCTTTGGACGCCACAAACATTGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCGAGTGTCCCCCATCCTGGTCAAGGAACCACCATCAACGTGACCGAAACTTCTGGGGACTCGAACAGAAGGGGTTGCTGCTCATCTTGA MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVIVMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS Homology
BLAST of Cp4.1LG05g09330 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 2.4e-105 Identity = 191/217 (88.02%), Postives = 208/217 (95.85%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 1.6e-101 Identity = 188/217 (86.64%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 4.0e-100 Identity = 183/217 (84.33%), Postives = 202/217 (93.09%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2) HSP 1 Score: 364.8 bits (935), Expect = 6.9e-100 Identity = 181/217 (83.41%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4) HSP 1 Score: 364.8 bits (935), Expect = 6.9e-100 Identity = 185/218 (84.86%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. NCBI nr
Match: XP_023532299.1 (ras-related protein Rab11C [Cucurbita pepo subsp. pepo]) HSP 1 Score: 428 bits (1101), Expect = 3.52e-151 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. NCBI nr
Match: XP_022946941.1 (ras-related protein Rab11C [Cucurbita moschata]) HSP 1 Score: 427 bits (1098), Expect = 1.01e-150 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. NCBI nr
Match: XP_023007279.1 (ras-related protein Rab11C [Cucurbita maxima]) HSP 1 Score: 426 bits (1096), Expect = 2.04e-150 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. NCBI nr
Match: KAG7035384.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427 bits (1098), Expect = 2.98e-150 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. NCBI nr
Match: KAG6605436.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 427 bits (1098), Expect = 4.12e-150 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy TrEMBL
Match: A0A6J1G4Z7 (ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV=1) HSP 1 Score: 427 bits (1098), Expect = 4.89e-151 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy TrEMBL
Match: A0A6J1L4I1 (ras-related protein Rab11C OS=Cucurbita maxima OX=3661 GN=LOC111499821 PE=4 SV=1) HSP 1 Score: 426 bits (1096), Expect = 9.86e-151 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy TrEMBL
Match: A0A5A7V7L9 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001070 PE=4 SV=1) HSP 1 Score: 414 bits (1063), Expect = 1.06e-145 Identity = 207/217 (95.39%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy TrEMBL
Match: A0A0A0KE61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1) HSP 1 Score: 414 bits (1063), Expect = 1.06e-145 Identity = 207/217 (95.39%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. ExPASy TrEMBL
Match: A0A1S3CKN1 (ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1) HSP 1 Score: 414 bits (1063), Expect = 1.06e-145 Identity = 207/217 (95.39%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B ) HSP 1 Score: 364.8 bits (935), Expect = 4.9e-101 Identity = 181/217 (83.41%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C ) HSP 1 Score: 364.8 bits (935), Expect = 4.9e-101 Identity = 185/218 (84.86%), Postives = 204/218 (93.58%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D ) HSP 1 Score: 362.5 bits (929), Expect = 2.4e-100 Identity = 182/218 (83.49%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C ) HSP 1 Score: 319.3 bits (817), Expect = 2.4e-87 Identity = 158/217 (72.81%), Postives = 191/217 (88.02%), Query Frame = 0
BLAST of Cp4.1LG05g09330 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D ) HSP 1 Score: 288.9 bits (738), Expect = 3.4e-78 Identity = 138/215 (64.19%), Postives = 175/215 (81.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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