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Cp4.1LG05g09250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGCAAATCAAGCTTTCGTGGTTGATTTCCCCAGAGCAGCAATGGAGAAAGAACATAAATCCAGATTGCCTAAACCTCCGACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTGACGAGTGTCTCGATGTCTTCTGGTAGTGCTGATATTTCTTCGAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTCATCGCCACAGCCTTTTCCTGAAACTGAGGGAAATAGAAGAGCAGCAAACGGAAATACCGTAGACGGCGGCTATGGCGATCAAAGAGGTATATGTTTTGCACCTCCTGGTGGCTGGCAACATCCAGCGGTGGCGACGACATTCGCCGATCCATCTACTCTGTTTACGTTCTTTCAATCGCAGTGCATCGTAAACAGTAAGACGGCGTGA ATGAATGCAAATCAAGCTTTCGTGGTTGATTTCCCCAGAGCAGCAATGGAGAAAGAACATAAATCCAGATTGCCTAAACCTCCGACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTGACGAGTGTCTCGATGTCTTCTGGTAGTGCTGATATTTCTTCGAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTCATCGCCACAGCCTTTTCCTGAAACTGAGGGAAATAGAAGAGCAGCAAACGGAAATACCGTAGACGGCGGCTATGGCGATCAAAGAGGTATATGTTTTGCACCTCCTGGTGGCTGGCAACATCCAGCGGTGGCGACGACATTCGCCGATCCATCTACTCTGTTTACGTTCTTTCAATCGCAGTGCATCGTAAACAGTAAGACGGCGTGA ATGAATGCAAATCAAGCTTTCGTGGTTGATTTCCCCAGAGCAGCAATGGAGAAAGAACATAAATCCAGATTGCCTAAACCTCCGACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTGACGAGTGTCTCGATGTCTTCTGGTAGTGCTGATATTTCTTCGAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTCATCGCCACAGCCTTTTCCTGAAACTGAGGGAAATAGAAGAGCAGCAAACGGAAATACCGTAGACGGCGGCTATGGCGATCAAAGAGGTATATGTTTTGCACCTCCTGGTGGCTGGCAACATCCAGCGGTGGCGACGACATTCGCCGATCCATCTACTCTGTTTACGTTCTTTCAATCGCAGTGCATCGTAAACAGTAAGACGGCGTGA MNANQAFVVDFPRAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKAILPLLSPLPSSPQPFPETEGNRRAANGNTVDGGYGDQRGICFAPPGGWQHPAVATTFADPSTLFTFFQSQCIVNSKTA Homology
BLAST of Cp4.1LG05g09250 vs. NCBI nr
Match: KAG6605440.1 (hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035388.1 hypothetical protein SDJN02_02184, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 269 bits (687), Expect = 1.18e-90 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. NCBI nr
Match: XP_038902307.1 (uncharacterized protein LOC120088941 [Benincasa hispida]) HSP 1 Score: 211 bits (537), Expect = 9.36e-68 Identity = 111/139 (79.86%), Postives = 117/139 (84.17%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. NCBI nr
Match: XP_011657141.1 (uncharacterized protein LOC105435808 [Cucumis sativus] >XP_031742438.1 uncharacterized protein LOC116404357 [Cucumis sativus] >KAE8645882.1 hypothetical protein Csa_017707 [Cucumis sativus]) HSP 1 Score: 204 bits (518), Expect = 7.35e-65 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. NCBI nr
Match: XP_023512816.1 (uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199 bits (507), Expect = 3.37e-63 Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. NCBI nr
Match: KAG6570684.1 (hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010531.1 hypothetical protein SDJN02_27325, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196 bits (499), Expect = 5.57e-62 Identity = 102/138 (73.91%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. ExPASy TrEMBL
Match: A0A0A0KBQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1) HSP 1 Score: 204 bits (518), Expect = 3.56e-65 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. ExPASy TrEMBL
Match: A0A5A7V856 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00270 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 2.12e-56 Identity = 97/124 (78.23%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. ExPASy TrEMBL
Match: A0A6J1D5B7 (uncharacterized protein LOC111017071 OS=Momordica charantia OX=3673 GN=LOC111017071 PE=4 SV=1) HSP 1 Score: 131 bits (330), Expect = 4.15e-36 Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. ExPASy TrEMBL
Match: A0A6P3ZH11 (uncharacterized protein LOC107411018 OS=Ziziphus jujuba OX=326968 GN=LOC107411018 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.06e-22 Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. ExPASy TrEMBL
Match: A0A2I4HTA9 (uncharacterized protein LOC108990495 OS=Juglans regia OX=51240 GN=LOC108990495 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.63e-21 Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of Cp4.1LG05g09250 vs. TAIR 10
Match: AT1G07473.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07476.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05 Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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