Cp4.1LG05g08980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g08980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein RABE1c
Location	Cp4.1LG05: 5950869 .. 5953613 (-)
RNA-Seq Expression	Cp4.1LG05g08980
Synteny	Cp4.1LG05g08980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCCTTCCGCCTGGGAAAGGGAATAAAGTCCGAGAAAAAGGAGGTCTCTTTACAGGTGGAGAGCCGCTCGAATTTTTTTTTTTCCATTTTTGGCTAAAATCGCTGTCAATCTTTCTCTAACCTCCCACGCGCCACCGCAACCGCCTCGACGGTGACTCGGTTGACGGCTGTTCTCTCGTTTTCTGTCTCGGAATCGGTACATTTCTCTAGCATTTGCGGTTTTTCTGCCGTTCCGTCTCTTTCTCGTTGAGGTTTGTTGAGTTTGTGGTTGTTTTGTTTCATTGTGTTCTAGGTTATTGCAGAGGGGGATTTCTGTTGAATCGATTTGATTGGAATTGTTATGGCTGCTCCACCTGCAAGAGCTAGGGCGGATTATGATTATCTCATAAAGCTTCTGTTAATCGGCGATAGCGGTGCGTGATTTTCTTTTCGGATTCAAATAGAGCCTCATTTTCTAGTTTCTTCTTTGAGGTTATCCTATAATGGTCTGTTGATTCGAAAAACGCGATAATTATTGATTGAGAATGCTTGTTTTTCTTGGATCTGGACTGCTCTCTCGAATCTCTCAGTTTGTGTGGATGATAATTTTAGTTACGCTGAATTTGATTTGTTGATTCAGGACGCGTGTTGGTTGATTTGGTGTATTCCATGATGTAAATTTGAACATCTCTATTATATCGATGTGCTGTTTTTGTATCTGTTTAACAGATTTGGTTCACATTGCAATATTACCTAATGATTTCCTTTGGTTCTGTTCATTTTTGTTGGTCATTTTTGCAGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTGTATAATTTTCTATATGAATGTATTTCCCATTTCTTATGGGATTATGGGATGAATTTATGCACTTAAAAAGTTTCCTTCTGAACTAACTAGGACATTTTCCCCTCCTGCAGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGTAAACGGATCAAGCTCCAAATTTGGGACACCGCTGGTCAGGAGCGGTTCCGTACGATCACCACAGGTATTCTTTTCTTACCTCCATGATCATGGACTTGTCTATTGCTAGAAGCTAGAATCATGATAGAATATGTTATATTTTAATGAAATTTGATTTGTGACTATTCATTACTGGATTTCTTCCTAAATTGTAAATCTTTCGTGGAATGGCTAACTGTTTTAATTTTGCTATTTGAACTTGGAGTTCAGTGTCCTGATATTGATTCTCTTTTCTTTGAGTATTTTCTTTATCAGGATTTTTGTTTTTGCTGTAGCATTAATTGTCAATGAGCAGAGTTTCTCAATAGTTCTGCTACCTGTTTGTTTTTTCAGCGTACTACCGCGGTGCCATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAGTAAGTACCATTTTGCCATTTCTTTTTGCAGATTTTTCTTTTGTCAAATTATATTCGTTCTTGTATATTTGCATTTGATCCAAAATATGATTTCATCTTTTCATTTATGATGCCTTGTCCTATGGATGTTTCATAGCTCCTTCCATTTCTCTATCATTTTGCCTTCTCACTCCTTATTCTCTAATGCTTTTCAGATATTCGAAATTGGATTCGTAATATCGAACAACATGCTTCTGATAATGTCAACAAGATACTGGTAGGAAACAAGGCCGACATGGACGAAAGCAAAAGGGTATGTTATTACTTCCATTCTGCTTATGAAAACTGAAAAGAAAGGCATCAACTTTAAATAGTTGTGCTACTAACCTTGTGGCATATTAGACAACTGTTGTTGATATATGCTTTGGACCTCAGATAATATTACCAAACTGATATCTAGGGGTATCTTTCTTGAAGAATCCTCGACTAAGATTATCTTTCTCTCAAGCCATGCCTGTTACCATTTCTTTTAACATCCTCATATTACAGGCTGTGCCTACATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTGTGAGTCGCTTGTTCTTCTTCCTGTGTAATTTTTCCATAATAGTTTGTGAATGTAAGCTGAAAAATATTTGGTATTTGCATTACAGAGTGCGAAGACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAATAGGAAGGGATATTAAGCAACGTCTCTCTGATACCGATTCAAAGTCTGAGGTATTTTATAATTCTTCTGCTATAGTTCACCTAAAAAAACAAGAAATAACCAAAGCTCGAACTTTTTATTTTCTCATTGTGTATTATAATTATTCTTGATTAATGAACCGAAGACGTGTGGTTTTTGTTACGTTTGCAGCCTTCGACGATCAAGATCAATCAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCATCCTGCTGTGGTTCTTAAGATTGTCAAACCCTTTGAAGTAGTCATATATTGAAGTTGTCATACTTCATTGATGGGCGCATCTATTAGCTATTTTGTGATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGTACTTTTCATGTTTTAGAATTTCATTTGTGATAATGTCTATATTATAAAGAGATTTATTTGTTTCCTTTTCATTTTGAGTTTTTTCAGAAACAATGTTATTCCAATTATTTGTTTGCTACCGGATGGTTTGTATATATTCAACTATTTTGACTTTAAGACGTATCTTCTTAATGGTACTCATTTTCTCTAA

mRNA sequence

TAAGCCTTCCGCCTGGGAAAGGGAATAAAGTCCGAGAAAAAGGAGGTCTCTTTACAGGTGGAGAGCCGCTCGAATTTTTTTTTTTCCATTTTTGGCTAAAATCGCTGTCAATCTTTCTCTAACCTCCCACGCGCCACCGCAACCGCCTCGACGGTGACTCGGTTGACGGCTGTTCTCTCGTTTTCTGTCTCGGAATCGGTTATTGCAGAGGGGGATTTCTGTTGAATCGATTTGATTGGAATTGTTATGGCTGCTCCACCTGCAAGAGCTAGGGCGGATTATGATTATCTCATAAAGCTTCTGTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGTAAACGGATCAAGCTCCAAATTTGGGACACCGCTGGTCAGGAGCGGTTCCGTACGATCACCACAGCGTACTACCGCGGTGCCATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAATATTCGAAATTGGATTCGTAATATCGAACAACATGCTTCTGATAATGTCAACAAGATACTGGTAGGAAACAAGGCCGACATGGACGAAAGCAAAAGGGCTGTGCCTACATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTAGTGCGAAGACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAATAGGAAGGGATATTAAGCAACGTCTCTCTGATACCGATTCAAAGTCTGAGCCTTCGACGATCAAGATCAATCAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCATCCTGCTGTGGTTCTTAAGATTGTCAAACCCTTTGAAGTAGTCATATATTGAAGTTGTCATACTTCATTGATGGGCGCATCTATTAGCTATTTTGTGATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGTACTTTTCATGTTTTAGAATTTCATTTGTGATAATGTCTATATTATAAAGAGATTTATTTGTTTCCTTTTCATTTTGAGTTTTTTCAGAAACAATGTTATTCCAATTATTTGTTTGCTACCGGATGGTTTGTATATATTCAACTATTTTGACTTTAAGACGTATCTTCTTAATGGTACTCATTTTCTCTAA

Coding sequence (CDS)

ATGGCTGCTCCACCTGCAAGAGCTAGGGCGGATTATGATTATCTCATAAAGCTTCTGTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGTAAACGGATCAAGCTCCAAATTTGGGACACCGCTGGTCAGGAGCGGTTCCGTACGATCACCACAGCGTACTACCGCGGTGCCATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAATATTCGAAATTGGATTCGTAATATCGAACAACATGCTTCTGATAATGTCAACAAGATACTGGTAGGAAACAAGGCCGACATGGACGAAAGCAAAAGGGCTGTGCCTACATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTTGAAACTAGTGCGAAGACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAATAGGAAGGGATATTAAGCAACGTCTCTCTGATACCGATTCAAAGTCTGAGCCTTCGACGATCAAGATCAATCAAGACCAGGGAGCCAATGCTGGTCAGGCTGCACAAAAATCATCCTGCTGTGGTTCTTAA

Protein sequence

MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS

Homology

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BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 3.9e-111
Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           LSDTDS++EP+TIKI+Q DQ A AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.0e-108
Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           L+DTD+++EP TIKINQ DQGA   QA QKS+CCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

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BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.9e-103
Identity = 196/217 (90.32%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LSDTDSKSE--PSTIKINQDQGANAGQAAQKSSCCGS 216
           L+D+D++ E  PS      DQ  N  QAA KS+CCGS
Sbjct: 181 LADSDTRQEAQPSITIKPADQSGN--QAAAKSACCGS 215

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.8e-100
Identity = 182/213 (85.45%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCC 214
           L++TD+K+EP  IKI +   A +   A+KS+CC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSSTAEKSACC 213

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97
Identity = 179/215 (83.26%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQG--ANAGQAAQKSSCC 214
           L+++D+K+EP  IKI +     A++    +KS+CC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Cp4.1LG05g08980 vs. NCBI nr
Match: XP_022947496.1 (ras-related protein RABE1c [Cucurbita moschata] >XP_022947497.1 ras-related protein RABE1c [Cucurbita moschata] >XP_023532300.1 ras-related protein RABE1c-like [Cucurbita pepo subsp. pepo] >KAG6605480.1 Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035422.1 Ras-related protein RABE1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422 bits (1084), Expect = 1.18e-148
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215
           LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215

[Close]

BLAST of Cp4.1LG05g08980 vs. NCBI nr
Match: XP_023006956.1 (ras-related protein RABE1c-like [Cucurbita maxima] >XP_023006957.1 ras-related protein RABE1c-like [Cucurbita maxima])

HSP 1 Score: 418 bits (1074), Expect = 3.95e-147
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAA PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAALPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215
           LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215

[Close]

BLAST of Cp4.1LG05g08980 vs. NCBI nr
Match: XP_022148361.1 (ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-related protein RABE1c-like [Momordica charantia])

HSP 1 Score: 415 bits (1066), Expect = 6.32e-146
Identity = 210/214 (98.13%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCG 214
           L+DTDSK+EPSTIKINQDQGANAGQAAQKS+CCG
Sbjct: 181 LADTDSKAEPSTIKINQDQGANAGQAAQKSACCG 214

[Close]

BLAST of Cp4.1LG05g08980 vs. NCBI nr
Match: XP_004148215.1 (ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Csa_022967 [Cucumis sativus])

HSP 1 Score: 413 bits (1062), Expect = 2.77e-145
Identity = 211/216 (97.69%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 215
           L+DTDSK+EPSTIKINQ DQGANAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Cp4.1LG05g08980 vs. NCBI nr
Match: XP_008448379.1 (PREDICTED: ras-related protein RABE1c [Cucumis melo])

HSP 1 Score: 411 bits (1057), Expect = 1.60e-144
Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 215
           L+DTDSK+EPSTIKINQ DQGANAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL
Match: A0A6J1G6M1 (ras-related protein RABE1c OS=Cucurbita moschata OX=3662 GN=LOC111451346 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 5.72e-149
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215
           LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL
Match: A0A6J1KX78 (ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111499594 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 1.91e-147
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAA PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAALPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215
           LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCGS 215

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL
Match: A0A6J1D4V3 (ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 3.06e-146
Identity = 210/214 (98.13%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQDQGANAGQAAQKSSCCG 214
           L+DTDSK+EPSTIKINQDQGANAGQAAQKS+CCG
Sbjct: 181 LADTDSKAEPSTIKINQDQGANAGQAAQKSACCG 214

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL
Match: A0A0A0KHW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 1.34e-145
Identity = 211/216 (97.69%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 215
           L+DTDSK+EPSTIKINQ DQGANAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL
Match: A0A1S3BJJ0 (ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 7.75e-145
Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 215
           L+DTDSK+EPSTIKINQ DQGANAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Cp4.1LG05g08980 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-112
Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           LSDTDS++EP+TIKI+Q DQ A AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG05g08980 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-112
Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           LSDTDS++EP+TIKI+Q DQ A AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG05g08980 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-112
Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           LSDTDS++EP+TIKI+Q DQ A AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG05g08980 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 397.5 bits (1020), Expect = 6.8e-111
Identity = 203/216 (93.98%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           L+DTDS++EP+TIKI+Q DQ A AGQA QKS+CCGS
Sbjct: 181 LADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of Cp4.1LG05g08980 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 392.1 bits (1006), Expect = 2.8e-109
Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LSDTDSKSEPSTIKINQ-DQGANAGQAAQKSSCCGS 216
           L+DTD+++EP TIKINQ DQGA   QA QKS+CCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g08980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	3.9e-111	94.91	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	4.0e-108	92.13	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	3.9e-103	90.32	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	6.8e-100	85.45	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	4.1e-97	83.26	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of Cp4.1LG05g08980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947496.1	1.18e-148	100.00	ras-related protein RABE1c [Cucurbita moschata] >XP_022947497.1 ras-related prot...	[more]
XP_023006956.1	3.95e-147	99.53	ras-related protein RABE1c-like [Cucurbita maxima] >XP_023006957.1 ras-related p...	[more]
XP_022148361.1	6.32e-146	98.13	ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-relate...	[more]
XP_004148215.1	2.77e-145	97.69	ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Cs...	[more]
XP_008448379.1	1.60e-144	97.69	PREDICTED: ras-related protein RABE1c [Cucumis melo]	[more]

BLAST of Cp4.1LG05g08980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6M1	5.72e-149	100.00	ras-related protein RABE1c OS=Cucurbita moschata OX=3662 GN=LOC111451346 PE=4 SV...	[more]
A0A6J1KX78	1.91e-147	99.53	ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111499594 PE=4...	[more]
A0A6J1D4V3	3.06e-146	98.13	ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 P...	[more]
A0A0A0KHW0	1.34e-145	97.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1	[more]
A0A1S3BJJ0	7.75e-145	97.69	ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g08980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46060.1	2.7e-112	94.91	RAB GTPase homolog 8A	[more]
AT3G46060.2	2.7e-112	94.91	RAB GTPase homolog 8A	[more]
AT3G46060.3	2.7e-112	94.91	RAB GTPase homolog 8A	[more]
AT5G59840.1	6.8e-111	93.98	Ras-related small GTP-binding family protein	[more]
AT3G53610.1	2.8e-109	92.13	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.3 coord: 155..177 score: 45.87 coord: 57..79 score: 57.68 coord: 119..132 score: 51.25 coord: 16..37 score: 55.38
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 17..180 e-value: 4.8E-35 score: 132.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 7.8E-106 score: 367.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0028 score: 2.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..212 e-value: 4.3E-6 score: 36.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..215
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 1..213
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..213
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..213 score: 38.175129
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..182 score: 11.113312
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 13..180 e-value: 1.15829E-119 score: 335.007
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..179 e-value: 5.8E-14 score: 58.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..178 e-value: 5.3E-66 score: 221.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..215 score: 20.929562
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..213 e-value: 1.8E-75 score: 254.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..187
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..170 e-value: 1.4E-31 score: 107.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g08980.1	Cp4.1LG05g08980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003925	G protein activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity