Cp4.1LG05g08820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g08820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	embryo-specific protein ATS3A-like
Location	Cp4.1LG05: 5809024 .. 5810545 (+)
RNA-Seq Expression	Cp4.1LG05g08820
Synteny	Cp4.1LG05g08820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTTCCGGCGGAACAGCGCCGCCCTTCTGCGCCCTTCTCCTCCTCTCTCTACTCGCCGCCCGGTACTGCCTCGCTTCAACCCATGAGGTCTTTTCTTCTGCTCATTTATGCTAATTTTAATTTTCATATTTATATATATCACATTTTATTACGGTTAAATATCTTATATGATTGAGATATTTAAATTTAGAAAAATAAGATTCAAATTATCTTGGTGATAGAATATCTCAGTTAAGAACATTTTTTTTGAGATTCAAATCACTTCACAAGCAAGATGGCAAGATCGTTCATGTCTAGCTTGAATGATTCTCCTTAATCAAATATCTCAATGGAAGAACATTGGTTTGAAATTCGAATCACTCCACAGACAAGATTGATCATGTCGAACTTGAATGATTTTACCTGCAACATTGGTTTGAGATTCGAATCACTCCACAAGCAAAATTGATCCTGTCGAGCTTGAATGATTTTACCTGCAACCTAACGATGCGGAATTAAATAGAAATTTATTGGCTAAAAGAAATCACATAGTACATTTTCCAAGTCTTTCGTGCAAAGATAACATACATGTCAGCCTAAAAATAAAAACCTTAGACTTCAGCCTAAAAGTAAAAACCGTTGTAACTATATTTTATATTTTATGACCATAATTAGCCACCGTGTATAGGTCATAATTAACCACTATCTACCCCAAAATTTATAACGAAACTTGATCTTCAATGTGGCCTGAATTAAAAAATTTTGACAACATTTTCGTTCCATCTTAGTTGAAATATATGGTATTATTGATGTCTCTTGGTTCACATCAACTATATCTAGATATTTGTCTTCCCCTACCATAGGCAAATATATTAGGTATGTTATTCTCATATTTTTTGTAATTTATTTTTCTCAACTAAAATGCAGAAAACTTGCATGTACTCGGTCACCGTTGAAACAACGTGCACAAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGATTTGGCGACACGAATTCAAACGACATTGTCGTTCGACGCCTGAATTCGAAGCACGTGAGGAGGGTGGATTCTTTAGAACCACAACTTCTGGATGACATACCAAGAAAGCCGTTTCAAGCTTGCATGGTGGATCACTTCCAAGTCACTGCAAAATGTGTCACCTCGCCGATTTGTTACCTTTACCTGAAAGTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCCATGTTCGGCTGTCGGAGAGCCCACATCTTAGCTCAAATAATTTCTACTTCCGACGTGTACTGCCTCGACACGTTTGGCATGGATTGGACACGTGTCGTGGTGACGTCACCCCTTTTGGCATCAAACGCAGTAGAAAAGTCTTTGCCGCTAGTAAACATTTTTTAAGGCATAAATTCAATTAAATTCCCCAAATGTAATTAAATGTCATGTTAATATTATTATTATTATTATTATTATTATTATTATAAATTGATAATAATTAATGATATATAAGCTGTTGTATATAAATTAATTTTAACCAAATTA

mRNA sequence

ATGGCCGCCGCCCTTCTGCGCCCTTCTCCTCCTCTCTCTACTCGCCGCCCGAAAACTTGCATGTACTCGGTCACCGTTGAAACAACGTGCACAAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGATTTGGCGACACGAATTCAAACGACATTGTCGTTCGACGCCTGAATTCGAAGCACGTGAGGAGGGTGGATTCTTTAGAACCACAACTTCTGGATGACATACCAAGAAAGCCGTTTCAAGCTTGCATGGTGGATCACTTCCAAGTCACTGCAAAATGTGTCACCTCGCCGATTTGTTACCTTTACCTGAAAGTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCCATGTTCGGCTGTCGGAGAGCCCACATCTTAGCTCAAATAATTTCTACTTCCGACGTGTACTGCCTCGACACGTTTGGCATGGATTGGACACGTGTCGTGGTGACGTCACCCCTTTTGGCATCAAACGCAGTAGAAAAGTCTTTGCCGCTAGTAAACATTTTTTAAGGCATAAATTCAATTAAATTCCCCAAATGTAATTAAATGTCATGTTAATATTATTATTATTATTATTATTATTATTATTATAAATTGATAATAATTAATGATATATAAGCTGTTGTATATAAATTAATTTTAACCAAATTA

Coding sequence (CDS)

ATGGCCGCCGCCCTTCTGCGCCCTTCTCCTCCTCTCTCTACTCGCCGCCCGAAAACTTGCATGTACTCGGTCACCGTTGAAACAACGTGCACAAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGATTTGGCGACACGAATTCAAACGACATTGTCGTTCGACGCCTGAATTCGAAGCACGTGAGGAGGGTGGATTCTTTAGAACCACAACTTCTGGATGACATACCAAGAAAGCCGTTTCAAGCTTGCATGGTGGATCACTTCCAAGTCACTGCAAAATGTGTCACCTCGCCGATTTGTTACCTTTACCTGAAAGTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCCATGTTCGGCTGTCGGAGAGCCCACATCTTAGCTCAAATAATTTCTACTTCCGACGTGTACTGCCTCGACACGTTTGGCATGGATTGGACACGTGTCGTGGTGACGTCACCCCTTTTGGCATCAAACGCAGTAGAAAAGTCTTTGCCGCTAGTAAACATTTTTTAAGGCATAAATTCAATTAA

Protein sequence

MAAALLRPSPPLSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

Homology

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.3e-15
Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 8   PSPPLSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDS 67
           P P L       C Y+V ++T+C+  + T + +S+ FGD   N++ V+R           
Sbjct: 38  PKPKL--ENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------- 97

Query: 68  LEPQLLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPH 127
                LDD   + F+ C  D ++++  C+   +CYLYL   G+D W+P  V +  S    
Sbjct: 98  -----LDDPSSRTFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKIYGSS--- 157

Query: 128 LSSNNFYFRRVLPRHVWHGLDTCRG 153
           + S  FY+   LP  VW+G + C G
Sbjct: 158 IRSVTFYYNLFLPNSVWYGFNVCNG 160

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-13
Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = 0


Query: 19  TCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPR 78
           TC Y+V + T+C+    T + +S+ FGD   N I   R                LDD   
Sbjct: 47  TCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPST 106

Query: 79  KPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRRV 138
           K F+ C  D FQ+   C T  ICY+YL  +G D W P  V +    S  ++   F +   
Sbjct: 107 KTFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT---FPYNTY 166

Query: 139 LPRHVWHGLDTCR----GDVTPFGIKRS 163
           +P  VW+G + C      +V   G++RS
Sbjct: 167 VPESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-09
Identity = 38/135 (28.15%), Postives = 59/135 (43.70%), Query Frame = 0


Query: 19  TCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPR 78
           TC Y+V V T+C     T + +S+ FGD + N +   +L                  + R
Sbjct: 33  TCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVR 92

Query: 79  KP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFR 138
            P     C  + FQV  +C+  PIC LY+   G D W P  + +    S    S  F F 
Sbjct: 93  GPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGS---KSVKFDFS 148

Query: 139 RVLPR-HVWHGLDTC 151
           + +P+ + W+G + C
Sbjct: 153 KSVPQLNTWYGHNNC 148

[Close]

BLAST of Cp4.1LG05g08820 vs. NCBI nr
Match: XP_023532296.1 (embryo-specific protein ATS3A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340 bits (872), Expect = 6.95e-117
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   KTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ
Sbjct: 56  LASTHEKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 115

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN
Sbjct: 116 LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 175

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 176 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 222

[Close]

BLAST of Cp4.1LG05g08820 vs. NCBI nr
Match: KAG7035442.1 (Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331 bits (849), Expect = 2.82e-114
Identity = 154/161 (95.65%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 18  KTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIP 77
           KTCMY++TVETTCTKGADTSNH+SLRFGDT+SNDIVVR LNSKHVRRVDSLEPQ++DDIP
Sbjct: 3   KTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIP 62

Query: 78  RKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRR 137
           RKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRR
Sbjct: 63  RKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRR 122

Query: 138 VLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           VLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 123 VLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 163

[Close]

BLAST of Cp4.1LG05g08820 vs. NCBI nr
Match: KAG6605503.1 (Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (851), Expect = 3.85e-114
Identity = 155/167 (92.81%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   KTCMY++TVETTCTKGADTSNH+SLRFGDT+SNDIVVR LNSKHVRRVDSLEPQ
Sbjct: 26  LASTHQKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQ 85

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           ++DDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN
Sbjct: 86  VVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 145

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 146 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 192

[Close]

BLAST of Cp4.1LG05g08820 vs. NCBI nr
Match: XP_022947116.1 (embryo-specific protein ATS3A-like [Cucurbita moschata])

HSP 1 Score: 331 bits (849), Expect = 7.78e-114
Identity = 157/167 (94.01%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   KTCMY VTV+TTCT GADTSNHVSLRFGDTNSNDIVVR LNSKHVRRVDSLEPQ
Sbjct: 26  LASTHQKTCMYVVTVKTTCTNGADTSNHVSLRFGDTNSNDIVVRHLNSKHVRRVDSLEPQ 85

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           +LDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN
Sbjct: 86  VLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 145

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 146 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 192

[Close]

BLAST of Cp4.1LG05g08820 vs. NCBI nr
Match: XP_023007330.1 (embryo-specific protein ATS3A-like [Cucurbita maxima])

HSP 1 Score: 328 bits (840), Expect = 1.83e-112
Identity = 155/167 (92.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   K CMY+VTVETTCTKGADTSNHVSLRFGDTNSNDIVV  LNSKHVRRVDSLEPQ
Sbjct: 26  LASTHEKACMYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVGHLNSKHVRRVDSLEPQ 85

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           +LDD+PRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRL ESPHLSSN
Sbjct: 86  VLDDMPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLLESPHLSSN 145

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 146 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 192

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL
Match: A0A6J1G5H5 (embryo-specific protein ATS3A-like OS=Cucurbita moschata OX=3662 GN=LOC111451083 PE=4 SV=1)

HSP 1 Score: 331 bits (849), Expect = 3.76e-114
Identity = 157/167 (94.01%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   KTCMY VTV+TTCT GADTSNHVSLRFGDTNSNDIVVR LNSKHVRRVDSLEPQ
Sbjct: 26  LASTHQKTCMYVVTVKTTCTNGADTSNHVSLRFGDTNSNDIVVRHLNSKHVRRVDSLEPQ 85

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           +LDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN
Sbjct: 86  VLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 145

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 146 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 192

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL
Match: A0A6J1L2N6 (embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 8.86e-113
Identity = 155/167 (92.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L++   K CMY+VTVETTCTKGADTSNHVSLRFGDTNSNDIVV  LNSKHVRRVDSLEPQ
Sbjct: 26  LASTHEKACMYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVGHLNSKHVRRVDSLEPQ 85

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           +LDD+PRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRL ESPHLSSN
Sbjct: 86  VLDDMPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLLESPHLSSN 145

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Sbjct: 146 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 192

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL
Match: A0A6J1CYS2 (embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC111015516 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.48e-96
Identity = 135/161 (83.85%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 18  KTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIP 77
           KTCMY+VTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVD LEP++LDD+ 
Sbjct: 32  KTCMYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMS 91

Query: 78  RKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRR 137
           RKPFQACMVD FQVT KCVTSP+CY+YLK+AGADDWRPGFV VR  E PHLSS  FYFRR
Sbjct: 92  RKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRR 151

Query: 138 VLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN 178
           VLPRHVWHG DTC G+VTPFGIK  RKVFAASKHF RHK N
Sbjct: 152 VLPRHVWHGFDTCGGEVTPFGIKHHRKVFAASKHF-RHKLN 191

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL
Match: A0A1S3CK61 (uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 8.88e-92
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L   + K CMY+VTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVD LEPQ
Sbjct: 27  LGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQ 86

Query: 72  LLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSN 131
           +LDDI RKPFQ CMVD FQVT KCVTSPICYLYLK++GADDWRPGFV VR  E PHLSSN
Sbjct: 87  VLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSN 146

Query: 132 NFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV 165
            FYFRRVLPRHVWHG DTC G+VTPFGIKR+RKV
Sbjct: 147 YFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL
Match: A0A0A0KC84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 6.72e-89
Identity = 123/148 (83.11%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 18  KTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIP 77
           K CMY+VTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLN KHVRRVD LEPQ+LDD+ 
Sbjct: 32  KNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVS 91

Query: 78  RKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRR 137
           RKPFQ CMVD FQVT KCVTSPICYLYLK++G DDWRPGFV VR  + PHLSSN FYFRR
Sbjct: 92  RKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRR 151

Query: 138 VLPRHVWHGLDTCRGDVTPFGIKRSRKV 165
           VLPRHVWHG DTC G+VTPFG+KR+RKV
Sbjct: 152 VLPRHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of Cp4.1LG05g08820 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 8   PSPPLSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDS 67
           P P L       C Y+V ++T+C+  + T + +S+ FGD   N++ V+R           
Sbjct: 38  PKPKL--ENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------- 97

Query: 68  LEPQLLDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPH 127
                LDD   + F+ C  D ++++  C+   +CYLYL   G+D W+P  V +  S    
Sbjct: 98  -----LDDPSSRTFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKIYGSS--- 157

Query: 128 LSSNNFYFRRVLPRHVWHGLDTCRG 153
           + S  FY+   LP  VW+G + C G
Sbjct: 158 IRSVTFYYNLFLPNSVWYGFNVCNG 160

[Close]

BLAST of Cp4.1LG05g08820 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-14
Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = 0


Query: 19  TCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPR 78
           TC Y+V + T+C+    T + +S+ FGD   N I   R                LDD   
Sbjct: 47  TCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPST 106

Query: 79  KPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFRRV 138
           K F+ C  D FQ+   C T  ICY+YL  +G D W P  V +    S  ++   F +   
Sbjct: 107 KTFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT---FPYNTY 166

Query: 139 LPRHVWHGLDTCR----GDVTPFGIKRS 163
           +P  VW+G + C      +V   G++RS
Sbjct: 167 VPESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of Cp4.1LG05g08820 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 41/151 (27.15%), Postives = 65/151 (43.05%), Query Frame = 0


Query: 12  LSTRRPKTCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQ 71
           L     ++C Y+V V T+C     + + V++  GD + N +V  RL+             
Sbjct: 32  LDLHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLD------------- 91

Query: 72  LLDDIPRKP------FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSES 131
                  KP      F+ C  D FQV  KC+ + IC +Y+  +G D W P  V +    S
Sbjct: 92  -------KPLSGGGGFEKCSSDTFQVKGKCLNT-ICSVYIYRSGTDGWIPETVEIYKEGS 151

Query: 132 PHLSSNNFYFRRVLPRHVWHGLDTCRGDVTP 157
               S  F F + +P ++W+G + C     P
Sbjct: 152 ---KSVKFDFNKNVPENIWYGNNYCNNTDLP 158

[Close]

BLAST of Cp4.1LG05g08820 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 38/135 (28.15%), Postives = 59/135 (43.70%), Query Frame = 0


Query: 19  TCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPR 78
           TC Y+V V T+C     T + +S+ FGD + N +   +L                  + R
Sbjct: 33  TCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVR 92

Query: 79  KP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFR 138
            P     C  + FQV  +C+  PIC LY+   G D W P  + +    S    S  F F 
Sbjct: 93  GPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGS---KSVKFDFS 148

Query: 139 RVLPR-HVWHGLDTC 151
           + +P+ + W+G + C
Sbjct: 153 KSVPQLNTWYGHNNC 148

[Close]

BLAST of Cp4.1LG05g08820 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 38/135 (28.15%), Postives = 59/135 (43.70%), Query Frame = 0


Query: 19  TCMYSVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDSLEPQLLDDIPR 78
           TC Y+V V T+C     T + +S+ FGD + N +   +L                  + R
Sbjct: 5   TCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVR 64

Query: 79  KP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSESPHLSSNNFYFR 138
            P     C  + FQV  +C+  PIC LY+   G D W P  + +    S    S  F F 
Sbjct: 65  GPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGS---KSVKFDFS 120

Query: 139 RVLPR-HVWHGLDTC 151
           + +P+ + W+G + C
Sbjct: 125 KSVPQLNTWYGHNNC 120

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g08820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681K2	7.3e-15	30.34	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q6NPM5	5.3e-13	31.08	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q9LYP6	6.0e-09	28.15	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g08820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532296.1	6.95e-117	97.01	embryo-specific protein ATS3A-like [Cucurbita pepo subsp. pepo]	[more]
KAG7035442.1	2.82e-114	95.65	Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6605503.1	3.85e-114	92.81	Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947116.1	7.78e-114	94.01	embryo-specific protein ATS3A-like [Cucurbita moschata]	[more]
XP_023007330.1	1.83e-112	92.81	embryo-specific protein ATS3A-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG05g08820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5H5	3.76e-114	94.01	embryo-specific protein ATS3A-like OS=Cucurbita moschata OX=3662 GN=LOC111451083...	[more]
A0A6J1L2N6	8.86e-113	92.81	embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 P...	[more]
A0A6J1CYS2	3.48e-96	83.85	embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC11101551...	[more]
A0A1S3CK61	8.88e-92	83.77	uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=...	[more]
A0A0A0KC84	6.72e-89	83.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g08820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41475.1	5.2e-16	30.34	Embryo-specific protein 3, (ATS3)	[more]
AT5G62200.1	3.7e-14	31.08	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	4.3e-10	27.15	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	4.3e-10	28.15	seed gene 3	[more]
AT5G07190.2	4.3e-10	28.15	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 14..150 e-value: 1.3E-41 score: 141.4
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 9..143 e-value: 1.5E-5 score: 26.7
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 13..169
None	No IPR available	PANTHER	PTHR31718:SF30	EMBRYO-SPECIFIC PROTEIN	coord: 13..169
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 17..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g08820.1	Cp4.1LG05g08820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding