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Cp4.1LG05g08590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTGTGATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCTTACAAAGAATGATCATATGGAGGAACAGTGGTGAAGAAGAACAAGAAGCTATGAATCAACATCTAGTTTATGAGTGAACAATGGAACCAAATTCGTTGCCCCGGATTCGGGCACCGACAATAAAATTGCTATAGAGCTGCTACTTCACCTTTACGCTAAGGAAAAGAAAAAGATTAAACCAAAACCTTAAACCTTTTCCTATGTTTTAGGGTCGGTAAAAGAAAAGAGATTCATTCGACTTAACTCCTAAGGGAGAGGAAAGACGAAACATTAATTCGACTAAACCTGATTTCACTCTGACTCAAACTTCAACGACATCTTTTTTAGTGTTACATAAACTACAACTCCTAAAATTGGTCTGAGGCATATGCCCATTGTCAGTTAAAAGTTCAAACGTTCAAATTTCTAGCCTAACATGTCGGTGAGCTAAAAAACACGACTAAATAGTATATTTACGACTACGACTCGAACTTCAACGACATCTTTTTTAGCATTACGTAAACTACGACTCCTCAAACTGGTCAAGGCATATATCCATTGTCAACCNGAAAGAAACAAAAAGAATCTTCGTTTTACCAATGGACAAAGTGACCAAAACAACACATCTCTTAACCCTCTTGCATCAAACAACCGCCATGGCCGAAGCACAAAGAAAGCTTCAAACAAAGGAATTACTAATCCCAAAGAAATTCTTATGTGCGATCGCAACTTCAGAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGGTTTCGAATCAAGATCTCCATTCGATATAAAGAATGCCTCGAAGACATCGAAAGAAATAGTCATCAAGAGAAGTTAGAGCAAAGAGAAATTAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTGACATTTTCCCCTTCGAGTTTTGCAAGTTTCAAAATATATTTTCAAAAATATCATTAATTATCTGTTAGTATTATTATTATTAACCATAATCATAAATTTTTTAAATTGAGTTTGTCAATTATTTAATTTTTTTAATAAAATTAAAATATTAATTCATAATATATATATATTAATATTTAATAAAAATTCACTATTTAATTTTAATATATTTTTAAAAAATAACCTTCCAAATTACTATATATTATTTTCAAGCGTTATTAAAAATAAATTAATATTAAATATATATAAATTATATTGTAAACAAATATATATTTTTTAAATTAATAATAAATTTGAATTTGTTGAATTTAACAAATTTTTGGATGTATCAGATTTCCAGAATACCGTTAGATCAAATAGCTTAAAAATAAAATAGAAATTAAATTAATTTATGAAAATTTGAACTTACCATTGAATTTTCGATCTTTTCTGCAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT ATGGACAAAAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTTAGGAGGCGGATTTCAGAAGCAGATTTTGAATCAAAAGATCGAACCAACTGTCATGGCCAAAGCACAAAGAGAAAGCTTCAAGCGAAGGAATTACTAATCGCGAAGAAATTCCTAGATTTTCAAAAACAGAATTACCGGAAAGAAAAATCGAACGCAATGCTGATGGATTCTTCGTCCAAAAGCTATCGGGATTTTGAGCCTCTAATCGATTGCCTTCATTATCCCGAGTCTCATCTTCTACTCATCCACCTCTTAGGTTTTACACGCAACGGTCTGAAAGTTCGGGTGACATTCCCCGACAAGTTGAGGACCTCCGGCGAACGGAGGCTCACCGATCAGGTGACATCCACCAGCAAGTTGAGGATCTACGGTGAACGGAGGCTCACCAGCGGGAAGTGGCTCCGATTCCTCAAGGTAATCAATATCCCAGAAGATGCTGATACTAACAAGATCTCTGCCAAGTTGGAGAAAGGCATCCTCTACGTGACGCAGCCCAGAAAAACCTCCGCCGTCTCTTCCAACAACCCACCGGCTCAGCCACCGAAGCCCACGGCGGAATCCCAACCGCCGCCCACCACCTCCACTCGAGAGGGTGGATGGGTGAGAAGAGAAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTAGGGGCTGCTGTTCTT MDKRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVLRRRISEADFESKDRTNCHGQSTKRKLQAKELLIAKKFLDFQKQNYRKEKSNAMLMDSSSKSYRDFEPLIDCLHYPESHLLLIHLLGFTRNGLKVRVTFPDKLRTSGERRLTDQVTSTSKLRIYGERRLTSGKWLRFLKVINIPEDADTNKISAKLEKGILYVTQPRKTSAVSSNNPPAQPPKPTAESQPPPTTSTREGGWVRREEWLRRNMVNLALGAAVL Homology
BLAST of Cp4.1LG05g08590 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05 Identity = 57/232 (24.57%), Postives = 94/232 (40.52%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05 Identity = 57/232 (24.57%), Postives = 94/232 (40.52%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.9e-05 Identity = 57/232 (24.57%), Postives = 94/232 (40.52%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.9e-05 Identity = 57/232 (24.57%), Postives = 94/232 (40.52%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04 Identity = 56/232 (24.14%), Postives = 93/232 (40.09%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: KAG6590269.1 (15.7 kDa heat shock protein, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279 bits (714), Expect = 3.16e-89 Identity = 144/169 (85.21%), Postives = 151/169 (89.35%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: XP_023533331.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like, partial [Cucurbita pepo subsp. pepo] >XP_023534169.1 inactive protein RESTRICTED TEV MOVEMENT 2-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279 bits (714), Expect = 2.26e-88 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: KAG7033447.1 (Inactive protein RESTRICTED TEV MOVEMENT 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271 bits (693), Expect = 4.48e-86 Identity = 140/169 (82.84%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: XP_022960896.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata]) HSP 1 Score: 237 bits (605), Expect = 4.37e-73 Identity = 127/169 (75.15%), Postives = 135/169 (79.88%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. NCBI nr
Match: XP_022988169.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita maxima]) HSP 1 Score: 190 bits (483), Expect = 1.27e-52 Identity = 106/144 (73.61%), Postives = 112/144 (77.78%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy TrEMBL
Match: A0A6J1H8V9 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461558 PE=3 SV=1) HSP 1 Score: 237 bits (605), Expect = 2.12e-73 Identity = 127/169 (75.15%), Postives = 135/169 (79.88%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy TrEMBL
Match: A0A6J1JKU5 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485486 PE=3 SV=1) HSP 1 Score: 190 bits (483), Expect = 6.15e-53 Identity = 106/144 (73.61%), Postives = 112/144 (77.78%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy TrEMBL
Match: A0A6J1HCF0 (uncharacterized protein LOC111461557 OS=Cucurbita moschata OX=3662 GN=LOC111461557 PE=3 SV=1) HSP 1 Score: 173 bits (439), Expect = 3.11e-47 Identity = 96/140 (68.57%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy TrEMBL
Match: A0A5A7UQF5 (Inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00910 PE=3 SV=1) HSP 1 Score: 145 bits (367), Expect = 5.60e-36 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. ExPASy TrEMBL
Match: A0A5D3CDK6 (Inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00820 PE=3 SV=1) HSP 1 Score: 145 bits (367), Expect = 5.60e-36 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 6.9e-09 Identity = 48/154 (31.17%), Postives = 70/154 (45.45%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. TAIR 10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 6.9e-09 Identity = 35/116 (30.17%), Postives = 54/116 (46.55%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 3.2e-06 Identity = 57/232 (24.57%), Postives = 94/232 (40.52%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. TAIR 10
Match: AT5G37670.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 48.5 bits (114), Expect = 1.6e-05 Identity = 31/106 (29.25%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Cp4.1LG05g08590 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.8e-04 Identity = 33/117 (28.21%), Postives = 57/117 (48.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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