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Cp4.1LG05g08550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAATTATAAATTTCATCTTATCCAGCTATAAAAACTTTATAAAATAAAATAAAAACTCAAAACGGTGCGTTTAGGGCAGAGCTGGGGAAAGAGGGAGGGATATGAAAATCATTTCTTGAGCGAAGGGAAAAGAAGATCTCTACTAAAGCAGTGGAAAGACTCAAACCTCATTGCGACGTTCGACATCGATTCTGTTCTTAATCCGTTTGGCTGAAACTTAATCCAAATCCGATAATGAGTGTAAGTTCATCGGCTCAAATCGATGTTCCCTATTCTTCTTTACATTCCGATTCTAACATTTATCGATCTCCCGATTTTTTATTGCAGCCCGTTGATTCCAACCAGGCGAACCATGGTATTCTCTGCCCCGAAGCTCCAATTCAACGAACACAGTACGTTTTCTTTCTCTCTGTTTGCGTTCGTGGATACTTTTTGGTTAGACATTAAGTTTTTTGTTCTAGAATTGGGAGTTTTGGGGTTTTAATGACCTAAGATTTTCCAATTGGGAGTTGAGCGGTGAATGAATGGCGAAGTCTTGGTTTTGGAATCAGCTTAGCATTTGAACTCCTGGTTGTTTGTTTATAACTTCTGTTGTTGAATAGGTATCCCTATGTGACTGGGACATCCGTGGTTGCCATCAAATACAAAGATGGGATTTTAATGGTTTCCGATTTGGGAGGTCAGTGGAAAATCTTACCCATTCTTTTTCTTCAATATCCAATTAATTGTCTATTATATTGTATCTATGTCTTTCTACAATGGTTCAAAAGAAAGTTGTTGATGATTGTCAGCTTGTTTATCACCTTTTACTTGTTGATAGCAAAACACTTCTGGAAGTGATGTTTCTTTCTTTAAGTGATTCTGAATCTCGGATGTATGCGTTGGCAAATTATAATGGAATTGTGTTTGTATATGATATTTTAACTACAGGCTCCTATGGTTCCACATTGCGGTATAAGAGTGTGGAGCGAATCAAAGCTATTGGAAAACATTCTCTACTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAGTTGTTGCGAAATCTCGATGAGCTCATGTAAGCCTAAGATGGTTTGCTTTACTCTCACGGTTCTTTATATATGTTCATTGGGAATGCATGGTGTTCTGGATTGGAAATCACAGAGGTTGAGCGAAATCTCTTATTGTATTGTGAATGGTGCAGCTTGTATGACAACATGTGGGATGATGGTAATGCTCTCGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAAAATGGGCAAAAGTATCTCGGCACGGTAGATCTTTTGTTCTCTTACCTCTCATTCAATTAATTTTAAGTTTAGATGCTTCATCAGCTAACAATTTACCATTTGCATGCAGGTTAATATGATAGGTGTAACTTTTGAAGATGACCATGTTACTACTGGTTTTGGCAACCACCTTGCACGGCCAATTCTTCGTGATGAGTGGCATGAGAACCTGACTTATGAAGAAGGTGTGAAATTGCTGGAGAAATGTATGAGGGTACTCTTATACCGTGATAGGTCGGCTGTCAACAAGCTCCAGGTTTGAATCATTTTAGAGCTACATTTATCACTTTCATTTTTATGTATATTTGTGAGTGTCCAGCCGGCTTATATGCATATCCACTAGTCTCACTGGATAACCATCCAACATTTGGTTGTGAAACCCATAAGATTTCAATATCATAGGGAGTTTGCAACTATGGCATTTGAACCTATCCTTGTTCCTAATGATCACTTAACCAACCCAGTGGCATNGCTTCATGGGGTATTTGGCCAGAGAGGAATAATAGGTTTTTTTTAGAAGGGTGGAGAGATCATTGGAGGAGGTTTCCTTATGGGTGTCCATCCATCATGCTTTTTTTTTTTTTAAATCATTGGCCTGGTTTGATTCTTTTGGATTGGAATCCGTTCTTGTAGTTAGTTCTTGAACTCCTTTTGTGGTCTTTTTGTGTACCTTTGTACGAAATTTTTTTCAAATAGGAATGCCTTCAGAATGAAGCTCAGCAAGATTATGCGCATGCCCAAAAACTCTAGCTTGGTTTCTTAAATATGTATATATTAATGAACCCAGCCTAGCCCATGTTGATTCACTGATTATAGCTACATCCACCACGATCTCTCTAGTTTCTGGAACCTGTGTTTTGATCACTGGTTATAGTCTTCAATGGCTGGCGTTATTCTCTCATCATCTAATTTGGCATTTGCAGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAACCTTACTCCTTAAAAACATTCTGGAACTACGCTGCTTTTGAGAATCCCACTTCTGGCGCTGAAGGATCATGGTAGATTGAAGCTACCTCGTTTATTTCAGGTTCCATTTTCATGAATCGCTGTTCGGATCAAGAGTTGTGAAACAATTGACATATCAAAAGTTAGATGCGTCTTAGATACTTATTATTGGATTGTATGGAATGTCTACTTGGAACTATCTGTTTATATCCAACTCAGTGCATGTTGACTTCATTTTCTTGACTTTTTTATAATCACAATCAGTTGCTTTTTCATTATTAGTCTCAGCCTACTTTATTGCTTGACATGCTTTGATTTGAATGAAGTAAAGTCGATCATTCGACCAAGACAGTTAGAATTAACAGATTTAGATATTAATGATTTAGTACACAAACTAATTTTCAACGGGTAAACTGGGAGATCCCGCATCTGTTGGAAACATTCTTTACAAGGGTGTGGAAACTTCTTCCTAGCGTTTTAAAAACCTGAGGGGTAGCCCTAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGGATTGTTACAAATGATATCAAAGCCAAACACCGGGCGGTGTGCCAGCGAGAACCTTGAACCTCTAAGAGGGGTGGACACCAAACGGTGTGTTAGCAAGAGCGCTGGGCTCTGTAGGGGGTGGATTGTGAGATCCCACATCGATCGGAGAAAGGAACGAGTGCCAGCGAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTAAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTAAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTAGGACCCTGGACTCTGAAGGGAAGTAGATTGTGAGATCTCATATCGGTTGGAGAGGGAAATGAAACATGGGTGTGGAAACCTCTCCCTAGTTAAAAACCTTGATGGAAAGTTCGAAAGGAAAAACCGAAAGAAGACAATATTCGAAAACAATATTCGCTAGCGGTGGGCGTGGGTTGTTACATAAACTATCCACCCTTGTAACGGAACATTTTAACTGACAGCAATCTTTGATATTTTGAATTTGTTAGTATCCTCACCCTGCAAGAAAGAAACAAAGAACAAAGACACCCATGCATTCATCAGCGATACTATACTTCACTGCTTCCTCATCATTCAAGTTGCCTTCACATTTGGAAATCAACCATTTACAAACTATCTGTA ATTAAATTATAAATTTCATCTTATCCAGCTATAAAAACTTTATAAAATAAAATAAAAACTCAAAACGGTGCGTTTAGGGCAGAGCTGGGGAAAGAGGGAGGGATATGAAAATCATTTCTTGAGCGAAGGGAAAAGAAGATCTCTACTAAAGCAGTGGAAAGACTCAAACCTCATTGCGACGTTCGACATCGATTCTGTTCTTAATCCGTTTGGCTGAAACTTAATCCAAATCCGATAATGAGTGTAAGTTCATCGGCTCAAATCGATGTTCCCTATTCTTCTTTACATTCCGATTCTAACATTTATCGATCTCCCGATTTTTTATTGCAGCCCGTTGATTCCAACCAGGCGAACCATGGTATTCTCTGCCCCGAAGCTCCAATTCAACGAACACAGTATCCCTATGTGACTGGGACATCCGTGGTTGCCATCAAATACAAAGATGGGATTTTAATGGTTTCCGATTTGGGAGGCTCCTATGGTTCCACATTGCGGTATAAGAGTGTGGAGCGAATCAAAGCTATTGGAAAACATTCTCTACTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAGTTGTTGCGAAATCTCGATGAGCTCATCTTGTATGACAACATGTGGGATGATGGTAATGCTCTCGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAAAATGGGCAAAAGTATCTCGGCACGGTTAATATGATAGGTGTAACTTTTGAAGATGACCATGTTACTACTGGTTTTGGCAACCACCTTGCACGGCCAATTCTTCGTGATGAGTGGCATGAGAACCTGACTTATGAAGAAGGTGTGAAATTGCTGGAGAAATGTATGAGGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAACCTTACTCCTTAAAAACATTCTGGAACTACGCTGCTTTTGAGAATCCCACTTCTGGCGCTGAAGGATCATGGTAGATTGAAGCTACCTCGTTTATTTCAGTATCCTCACCCTGCAAGAAAGAAACAAAGAACAAAGACACCCATGCATTCATCAGCGATACTATACTTCACTGCTTCCTCATCATTCAAGTTGCCTTCACATTTGGAAATCAACCATTTACAAACTATCTGTA ATGAGTGTAAGTTCATCGGCTCAAATCGATGTTCCCTATTCTTCTTTACATTCCGATTCTAACATTTATCGATCTCCCGATTTTTTATTGCAGCCCGTTGATTCCAACCAGGCGAACCATGGTATTCTCTGCCCCGAAGCTCCAATTCAACGAACACAGTATCCCTATGTGACTGGGACATCCGTGGTTGCCATCAAATACAAAGATGGGATTTTAATGGTTTCCGATTTGGGAGGCTCCTATGGTTCCACATTGCGGTATAAGAGTGTGGAGCGAATCAAAGCTATTGGAAAACATTCTCTACTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAGTTGTTGCGAAATCTCGATGAGCTCATCTTGTATGACAACATGTGGGATGATGGTAATGCTCTCGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAAAATGGGCAAAAGTATCTCGGCACGGTTAATATGATAGGTGTAACTTTTGAAGATGACCATGTTACTACTGGTTTTGGCAACCACCTTGCACGGCCAATTCTTCGTGATGAGTGGCATGAGAACCTGACTTATGAAGAAGGTGTGAAATTGCTGGAGAAATGTATGAGGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAACCTTACTCCTTAAAAACATTCTGGAACTACGCTGCTTTTGAGAATCCCACTTCTGGCGCTGAAGGATCATGGTAG MSVSSSAQIDVPYSSLHSDSNIYRSPDFLLQPVDSNQANHGILCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGVKLLEKCMRIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW Homology
BLAST of Cp4.1LG05g08550 vs. ExPASy Swiss-Prot
Match: Q7DLR9 (Proteasome subunit beta type-4 OS=Arabidopsis thaliana OX=3702 GN=PBG1 PE=1 SV=2) HSP 1 Score: 377.9 bits (969), Expect = 9.4e-104 Identity = 179/243 (73.66%), Postives = 206/243 (84.77%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy Swiss-Prot
Match: Q3T108 (Proteasome subunit beta type-4 OS=Bos taurus OX=9913 GN=PSMB4 PE=1 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-48 Identity = 99/241 (41.08%), Postives = 154/241 (63.90%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy Swiss-Prot
Match: P99026 (Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.3e-48 Identity = 92/218 (42.20%), Postives = 145/218 (66.51%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy Swiss-Prot
Match: P28070 (Proteasome subunit beta type-4 OS=Homo sapiens OX=9606 GN=PSMB4 PE=1 SV=4) HSP 1 Score: 190.3 bits (482), Expect = 2.8e-47 Identity = 91/216 (42.13%), Postives = 144/216 (66.67%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy Swiss-Prot
Match: P34067 (Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2) HSP 1 Score: 190.3 bits (482), Expect = 2.8e-47 Identity = 94/239 (39.33%), Postives = 151/239 (63.18%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. NCBI nr
Match: XP_022948016.1 (proteasome subunit beta type-4-like isoform X1 [Cucurbita moschata] >XP_023532284.1 proteasome subunit beta type-4-like [Cucurbita pepo subsp. pepo] >KAG7035465.1 Proteasome subunit beta type-4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 467 bits (1201), Expect = 3.15e-165 Identity = 229/245 (93.47%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. NCBI nr
Match: KAG6605528.1 (Proteasome subunit beta type-4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 464 bits (1195), Expect = 2.59e-164 Identity = 228/245 (93.06%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. NCBI nr
Match: XP_023007280.1 (proteasome subunit beta type-4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 464 bits (1195), Expect = 2.59e-164 Identity = 228/245 (93.06%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. NCBI nr
Match: KAG7010616.1 (Proteasome subunit beta type-4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 463 bits (1192), Expect = 7.41e-164 Identity = 226/245 (92.24%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. NCBI nr
Match: XP_023512002.1 (proteasome subunit beta type-4-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462 bits (1189), Expect = 2.12e-163 Identity = 225/245 (91.84%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy TrEMBL
Match: A0A6J1G834 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111451719 PE=3 SV=1) HSP 1 Score: 467 bits (1201), Expect = 1.52e-165 Identity = 229/245 (93.47%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy TrEMBL
Match: A0A6J1L2I8 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499823 PE=3 SV=1) HSP 1 Score: 464 bits (1195), Expect = 1.25e-164 Identity = 228/245 (93.06%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy TrEMBL
Match: A0A6J1J6N8 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111483953 PE=3 SV=1) HSP 1 Score: 461 bits (1185), Expect = 4.18e-163 Identity = 225/245 (91.84%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy TrEMBL
Match: A0A6J1FW56 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111449042 PE=3 SV=1) HSP 1 Score: 460 bits (1184), Expect = 5.94e-163 Identity = 225/245 (91.84%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. ExPASy TrEMBL
Match: A0A5D3CQV9 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00450 PE=3 SV=1) HSP 1 Score: 458 bits (1179), Expect = 3.44e-162 Identity = 222/245 (90.61%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. TAIR 10
Match: AT1G56450.1 (20S proteasome beta subunit G1 ) HSP 1 Score: 377.9 bits (969), Expect = 6.7e-105 Identity = 179/243 (73.66%), Postives = 206/243 (84.77%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. TAIR 10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2 ) HSP 1 Score: 52.4 bits (124), Expect = 6.5e-07 Identity = 39/165 (23.64%), Postives = 79/165 (47.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. TAIR 10
Match: AT5G40580.2 (20S proteasome beta subunit PBB2 ) HSP 1 Score: 52.4 bits (124), Expect = 6.5e-07 Identity = 39/165 (23.64%), Postives = 79/165 (47.88%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. TAIR 10
Match: AT3G27430.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06 Identity = 40/161 (24.84%), Postives = 77/161 (47.83%), Query Frame = 0
BLAST of Cp4.1LG05g08550 vs. TAIR 10
Match: AT3G27430.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06 Identity = 40/161 (24.84%), Postives = 77/161 (47.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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