Homology
BLAST of Cp4.1LG05g08510 vs. ExPASy Swiss-Prot
Match:
Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 2.0e-38
Identity = 80/214 (37.38%), Postives = 130/214 (60.75%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
M GV +++ ++S++ G++ D++ GR++HG + G + +V + ++L+DMY K
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL-ETGRVKCDVFIGSSLVDMYGKC 254
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
A ++FD + RNVV+WTALIAG ++S FD+G F ML+ ++ PNE TL S++
Sbjct: 255 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 314
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
+ C VGAL G+ +H Y+++N ++ T LID+Y KCG + A +F + EK+V
Sbjct: 315 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 374
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 215
W+A+I+ +A AF LF ML S V PN+
Sbjct: 375 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
BLAST of Cp4.1LG05g08510 vs. ExPASy Swiss-Prot
Match:
Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 2.9e-37
Identity = 78/209 (37.32%), Postives = 123/209 (58.85%), Query Frame = 0
Query: 5 GVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLA 64
G R D+ + EL D+ +G+ IH +V+ + + + T L+DMY K +
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV---VLTGLLDMYAKCGEIK 196
Query: 65 SAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLITECG 124
SA ++F+ ++ RNVV WT++IAG +++ +EG F+RM E N++ NE T +LI C
Sbjct: 197 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 256
Query: 125 FVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSA 184
+ AL GKW H L+++G +S L T+L+DMY KCG ++ AR +FN D+ +W+A
Sbjct: 257 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 316
Query: 185 LISAYAHASCIDQAFGLFLKMLDSEVKPN 214
+I Y H +++A LF KM E+KPN
Sbjct: 317 MIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
BLAST of Cp4.1LG05g08510 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 72/202 (35.64%), Postives = 118/202 (58.42%), Query Frame = 0
Query: 13 LISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLASAMRLFDG 72
L S++ +F E D+ G+ IHGYV+R +V + ++L+DMY K + + R+F
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFSR 304
Query: 73 LSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLITECGFVGALDLG 132
L R+ +SW +L+AG +++ R++E + F +M+ + P + S+I C + L LG
Sbjct: 305 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 364
Query: 133 KWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHA 192
K LH Y+LR GFG ++ +A+AL+DMY KCG + AR +F+ + D W+A+I +A
Sbjct: 365 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 424
Query: 193 SCIDQAFGLFLKMLDSEVKPNK 215
+A LF +M VKPN+
Sbjct: 425 GHGHEAVSLFEEMKRQGVKPNQ 444
BLAST of Cp4.1LG05g08510 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33
Identity = 73/240 (30.42%), Postives = 131/240 (54.58%), Query Frame = 0
Query: 6 VRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLAS 65
V+ S V ++ ++ ++ +++ GR + Y+ N N + + L A++DMY K ++
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYTKCGSIED 287
Query: 66 AMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRM--------------------- 125
A RLFD + +++ V+WT ++ G S ++ + + M
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 347
Query: 126 -----------LEENIVPNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATA 185
L++N+ N+ITL+S ++ C VGAL+LG+W+H+Y+ ++G M+ + +A
Sbjct: 348 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 407
Query: 186 LIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFGLFLKMLDSEVKPN 214
LI MY KCG + +R +FN VE++DV +WSA+I A C ++A +F KM ++ VKPN
Sbjct: 408 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
BLAST of Cp4.1LG05g08510 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33
Identity = 77/241 (31.95%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 5 GVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLA 64
GVR ++++S I +L ++ G++ HGYV+RN G E + + ALIDMY K
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWD-NICNALIDMYMKCHRQD 391
Query: 65 SAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIV-------------- 124
+A R+FD +S + VV+W +++AG + + D + F M E+NIV
Sbjct: 392 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 451
Query: 125 ------------------PNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALAT 184
+ +T++S+ + CG +GALDL KW++ Y+ +NG + + L T
Sbjct: 452 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 511
Query: 185 ALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFGLFLKMLDSEVKP 214
L+DM+ +CG A ++FN + +DV W+A I A A A ++A LF M++ +KP
Sbjct: 512 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 570
BLAST of Cp4.1LG05g08510 vs. NCBI nr
Match:
XP_023533718.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 430 bits (1105), Expect = 4.78e-144
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG
Sbjct: 179 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI
Sbjct: 239 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK
Sbjct: 299 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. NCBI nr
Match:
KAG7033433.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 416 bits (1070), Expect = 8.73e-139
Identity = 207/214 (96.73%), Postives = 210/214 (98.13%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVG +LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGAKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
D LASAMRLFDGLSQRNVVSWTALIAGCIRSCRF EGAKNFSRMLEENIVPNEITLLSLI
Sbjct: 239 DKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIVPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK
Sbjct: 299 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAHASCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. NCBI nr
Match:
KAG6590282.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 416 bits (1070), Expect = 8.73e-139
Identity = 207/214 (96.73%), Postives = 210/214 (98.13%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGV+LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
D LASAMRLFDGLSQRNVVSWT LIAGCIRSCRF EGAKNFSRMLEENIVPNEITLLSLI
Sbjct: 239 DKLASAMRLFDGLSQRNVVSWTVLIAGCIRSCRFVEGAKNFSRMLEENIVPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK
Sbjct: 299 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAHASCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. NCBI nr
Match:
XP_022960858.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 416 bits (1070), Expect = 8.73e-139
Identity = 207/214 (96.73%), Postives = 210/214 (98.13%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGV+LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
D LASAMRLFDGLSQRNVVSWTALIAGCIRSCRF EGAKNFSRMLEENI PNEITLLSLI
Sbjct: 239 DKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK
Sbjct: 299 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAHASCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. NCBI nr
Match:
XP_022988029.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])
HSP 1 Score: 405 bits (1042), Expect = 1.40e-134
Identity = 201/214 (93.93%), Postives = 207/214 (96.73%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGV+LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVG ER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGKERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
DNLASAMRLF+GLSQRNVVSWTALIAGCIRSCRF EGAKNFSRMLEENIVPNEITLLSLI
Sbjct: 239 DNLASAMRLFNGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIVPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLH+YLLRNGFGMSL L TALIDMYGKCGQVAYARALFN V+EKDVK
Sbjct: 299 TECGFVGALDLGKWLHSYLLRNGFGMSLTLTTALIDMYGKCGQVAYARALFNVVDEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAH SCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHTSCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. ExPASy TrEMBL
Match:
A0A6J1HA74 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111461539 PE=3 SV=1)
HSP 1 Score: 416 bits (1070), Expect = 4.23e-139
Identity = 207/214 (96.73%), Postives = 210/214 (98.13%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGV+LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
D LASAMRLFDGLSQRNVVSWTALIAGCIRSCRF EGAKNFSRMLEENI PNEITLLSLI
Sbjct: 239 DKLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIAPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK
Sbjct: 299 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAHASCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHASCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. ExPASy TrEMBL
Match:
A0A6J1JKG9 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima OX=3661 GN=LOC111485395 PE=3 SV=1)
HSP 1 Score: 405 bits (1042), Expect = 6.77e-135
Identity = 201/214 (93.93%), Postives = 207/214 (96.73%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
MHFVGV+LSDVALISMIGVFGELSDMKSGRAIHGYVVRNVG ER+E+PLTTALIDMYCKG
Sbjct: 179 MHFVGVKLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGKERIELPLTTALIDMYCKG 238
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
DNLASAMRLF+GLSQRNVVSWTALIAGCIRSCRF EGAKNFSRMLEENIVPNEITLLSLI
Sbjct: 239 DNLASAMRLFNGLSQRNVVSWTALIAGCIRSCRFVEGAKNFSRMLEENIVPNEITLLSLI 298
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVGALDLGKWLH+YLLRNGFGMSL L TALIDMYGKCGQVAYARALFN V+EKDVK
Sbjct: 299 TECGFVGALDLGKWLHSYLLRNGFGMSLTLTTALIDMYGKCGQVAYARALFNVVDEKDVK 358
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAH SCIDQAF LFLKMLDSEVKPNK
Sbjct: 359 IWSALISAYAHTSCIDQAFSLFLKMLDSEVKPNK 392
BLAST of Cp4.1LG05g08510 vs. ExPASy TrEMBL
Match:
A0A5A7V2V9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001350 PE=3 SV=1)
HSP 1 Score: 357 bits (917), Expect = 3.71e-116
Identity = 175/214 (81.78%), Postives = 191/214 (89.25%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
M FVGV+LS VALIS+IGVFG L DMKSGRA+HGY+VRNVG+E+MEV LTTALIDMYCK
Sbjct: 181 MQFVGVKLSGVALISLIGVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSLTTALIDMYCKC 240
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
+ LASA RLFD LS+R+VVSWT +I GCIRSCR EGAKNF+RMLEE + PNEITLLSLI
Sbjct: 241 ECLASAQRLFDRLSKRSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLI 300
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFV LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGVE+KDVK
Sbjct: 301 TECGFVKTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVK 360
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAH SC+DQ F LFL+MLD+EVKPNK
Sbjct: 361 IWSALISAYAHVSCMDQVFNLFLEMLDNEVKPNK 394
BLAST of Cp4.1LG05g08510 vs. ExPASy TrEMBL
Match:
A0A1S3CJ58 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501009 PE=3 SV=1)
HSP 1 Score: 356 bits (914), Expect = 1.04e-115
Identity = 174/214 (81.31%), Postives = 191/214 (89.25%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
M FVGV+LS VALIS+IGVFG L DMKSGRA+HGY++RNVG+E+MEV LTTALIDMYCK
Sbjct: 181 MQFVGVKLSGVALISLIGVFGNLLDMKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKC 240
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
+ LASA RLFD LS+R+VVSWT +I GCIRSCR EGAKNF+RMLEE + PNEITLLSLI
Sbjct: 241 ECLASAQRLFDRLSKRSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLI 300
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFV LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGVE+KDVK
Sbjct: 301 TECGFVKTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVK 360
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 214
IWSALISAYAH SC+DQ F LFL+MLD+EVKPNK
Sbjct: 361 IWSALISAYAHVSCMDQVFNLFLEMLDNEVKPNK 394
BLAST of Cp4.1LG05g08510 vs. ExPASy TrEMBL
Match:
A0A0A0LYC2 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G690260 PE=3 SV=1)
HSP 1 Score: 356 bits (913), Expect = 1.43e-115
Identity = 171/213 (80.28%), Postives = 191/213 (89.67%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
M FVGV+LS VALIS+I VFG L DMKSGRA+HGY+VRNVG+E+MEV +TTALIDMYCKG
Sbjct: 180 MQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKG 239
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
LASA RLFD LS+R+VVSWT +IAGCIRSCR DEGAKNF+RMLEE + PNEITLLSLI
Sbjct: 240 GCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLI 299
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
TECGFVG LDLGKW HAYLLRNGFGMSLAL TALIDMYGKCGQV YARALFNGV++KDVK
Sbjct: 300 TECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVK 359
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPN 213
IWS LISAYAH SC+DQ F LF++ML+++VKPN
Sbjct: 360 IWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPN 392
BLAST of Cp4.1LG05g08510 vs. TAIR 10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 80/214 (37.38%), Postives = 130/214 (60.75%), Query Frame = 0
Query: 1 MHFVGVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKG 60
M GV +++ ++S++ G++ D++ GR++HG + G + +V + ++L+DMY K
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL-ETGRVKCDVFIGSSLVDMYGKC 254
Query: 61 DNLASAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLI 120
A ++FD + RNVV+WTALIAG ++S FD+G F ML+ ++ PNE TL S++
Sbjct: 255 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 314
Query: 121 TECGFVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVK 180
+ C VGAL G+ +H Y+++N ++ T LID+Y KCG + A +F + EK+V
Sbjct: 315 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 374
Query: 181 IWSALISAYAHASCIDQAFGLFLKMLDSEVKPNK 215
W+A+I+ +A AF LF ML S V PN+
Sbjct: 375 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
BLAST of Cp4.1LG05g08510 vs. TAIR 10
Match:
AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 78/209 (37.32%), Postives = 123/209 (58.85%), Query Frame = 0
Query: 5 GVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLA 64
G R D+ + EL D+ +G+ IH +V+ + + + T L+DMY K +
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV---VLTGLLDMYAKCGEIK 196
Query: 65 SAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLITECG 124
SA ++F+ ++ RNVV WT++IAG +++ +EG F+RM E N++ NE T +LI C
Sbjct: 197 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 256
Query: 125 FVGALDLGKWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSA 184
+ AL GKW H L+++G +S L T+L+DMY KCG ++ AR +FN D+ +W+A
Sbjct: 257 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 316
Query: 185 LISAYAHASCIDQAFGLFLKMLDSEVKPN 214
+I Y H +++A LF KM E+KPN
Sbjct: 317 MIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
BLAST of Cp4.1LG05g08510 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 72/202 (35.64%), Postives = 118/202 (58.42%), Query Frame = 0
Query: 13 LISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLASAMRLFDG 72
L S++ +F E D+ G+ IHGYV+R +V + ++L+DMY K + + R+F
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFSR 304
Query: 73 LSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIVPNEITLLSLITECGFVGALDLG 132
L R+ +SW +L+AG +++ R++E + F +M+ + P + S+I C + L LG
Sbjct: 305 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 364
Query: 133 KWLHAYLLRNGFGMSLALATALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHA 192
K LH Y+LR GFG ++ +A+AL+DMY KCG + AR +F+ + D W+A+I +A
Sbjct: 365 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 424
Query: 193 SCIDQAFGLFLKMLDSEVKPNK 215
+A LF +M VKPN+
Sbjct: 425 GHGHEAVSLFEEMKRQGVKPNQ 444
BLAST of Cp4.1LG05g08510 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 73/240 (30.42%), Postives = 131/240 (54.58%), Query Frame = 0
Query: 6 VRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLAS 65
V+ S V ++ ++ ++ +++ GR + Y+ N N + + L A++DMY K ++
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN--VNLTLANAMLDMYTKCGSIED 287
Query: 66 AMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRM--------------------- 125
A RLFD + +++ V+WT ++ G S ++ + + M
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 347
Query: 126 -----------LEENIVPNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALATA 185
L++N+ N+ITL+S ++ C VGAL+LG+W+H+Y+ ++G M+ + +A
Sbjct: 348 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 407
Query: 186 LIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFGLFLKMLDSEVKPN 214
LI MY KCG + +R +FN VE++DV +WSA+I A C ++A +F KM ++ VKPN
Sbjct: 408 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
BLAST of Cp4.1LG05g08510 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 141.7 bits (356), Expect = 6.8e-34
Identity = 77/241 (31.95%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 5 GVRLSDVALISMIGVFGELSDMKSGRAIHGYVVRNVGNERMEVPLTTALIDMYCKGDNLA 64
GVR ++++S I +L ++ G++ HGYV+RN G E + + ALIDMY K
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWD-NICNALIDMYMKCHRQD 391
Query: 65 SAMRLFDGLSQRNVVSWTALIAGCIRSCRFDEGAKNFSRMLEENIV-------------- 124
+A R+FD +S + VV+W +++AG + + D + F M E+NIV
Sbjct: 392 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 451
Query: 125 ------------------PNEITLLSLITECGFVGALDLGKWLHAYLLRNGFGMSLALAT 184
+ +T++S+ + CG +GALDL KW++ Y+ +NG + + L T
Sbjct: 452 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 511
Query: 185 ALIDMYGKCGQVAYARALFNGVEEKDVKIWSALISAYAHASCIDQAFGLFLKMLDSEVKP 214
L+DM+ +CG A ++FN + +DV W+A I A A A ++A LF M++ +KP
Sbjct: 512 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 570
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SX45 | 2.0e-38 | 37.38 | Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX... | [more] |
Q9ZQ74 | 2.9e-37 | 37.32 | Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... | [more] |
Q9LW63 | 1.5e-33 | 35.64 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
O82380 | 5.6e-33 | 30.42 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 9.5e-33 | 31.95 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_023533718.1 | 4.78e-144 | 100.00 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
KAG7033433.1 | 8.73e-139 | 96.73 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6590282.1 | 8.73e-139 | 96.73 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022960858.1 | 8.73e-139 | 96.73 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucur... | [more] |
XP_022988029.1 | 1.40e-134 | 93.93 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HA74 | 4.23e-139 | 96.73 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
A0A6J1JKG9 | 6.77e-135 | 93.93 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... | [more] |
A0A5A7V2V9 | 3.71e-116 | 81.78 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CJ58 | 1.04e-115 | 81.31 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc... | [more] |
A0A0A0LYC2 | 1.43e-115 | 80.28 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6902... | [more] |
Match Name | E-value | Identity | Description | |
AT1G50270.1 | 1.4e-39 | 37.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G03380.1 | 2.0e-38 | 37.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G23330.1 | 1.0e-34 | 35.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 4.0e-34 | 30.42 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 6.8e-34 | 31.95 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |