Cp4.1LG05g08430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCAAAAAATCAAACCAAAACGGATAAGATTTTTCCATCCTTGCCCATCTCGAGAAACCCTGATGGTATGGCACTGTCCAGGACTCCAGGAGCGTCGTACATCACTACCCTTCACCGTTTCACCACTCCCAAATCCACCAATAGAGCTTATTCGATTACAGTCATGGCCACGCCAATCCATAGCCGAATCAGACGTTGGCTTACTCTGTTCAGTATTTTACGAGCAAAAGAATGAATCTAAGTTTCGGATAATTGAAACCCTTCTTCCGAATTGATAGCAAAATCTGACGAACAAGAACAGAGGGTACCAATGGCAGGCTACGGTACAAGCGAGACCTATGCTTCTGAAATTGAATTGTTTATATCGCTTGCTGGTGATTCTGATGCTGGGATTTTGGAAGCTTTTCTTAACCCGATGAACGGTTAGCTCTAAGACTTTGCTTGTTCATGTATTTGTACCTTTTTTTTATGACTTTTCTTCTTTTAGCTGATCTATATATTATTGGTTTAGTTTTTGGCCAAAACTGACCCTTGTTGGATATACGTGTGTCTATATGTTCTATGCTCTTTAAGTTTTTTTTCCTTAAGTTTCTTGTTATTGATACGGATAAGGATCATGATGTTCTATAAGTTTTAACTAATCCTATTACACGATCCAAAACTAAGAAGATTCAAGAATTACATTAGTACTTCACCTTTATCTAATTGGTTCAAATTCCATTTCATGTGCTGCAAACTATTCCAAAGGTTTGGGCCATTTAAAGCTTCGAAGGTTGATGTGTGCAAGATTGAAGTTGACCATGGAGTTACTGTTAAATTCACTTGAAATGACATGTTCTTTGAAGAGTTCAATTAGTGTAAGGGAGATTATGGATAAAGGAAATTGTCTCTCGAGATTGAGATATTTTCTTAGAAATTCGTGCATGAATCTTTGATAGCTCTAAGTTCCCTTGTTATTCTTGTGATAGTTTGCGTTCGAGTCATTCAATCCAACCTAAATCAAGTTAGATTGTGGAATGATTCAATGTAGAACAAGAAATACATACATGGACTTCTCCATCAAGTCTGCAAAGATTGGCATCATGCACCTCTGAAATGTTCTTGGTGCGTTGGGAAGGTTGAACGACATTCTTTTGAAAGTATACGTCCGGTTGTCTTCTCCTAGGCCTCTGGCACAGTAGTGATTTGGTTGTATCTGGAATATCCATCCATAAAGCAATGGCAAACTTGACACACTTAGCTTGCAGTAGTCCATACACCAGTCAGTGACAGTGCCAGTAGGAATTAGTTCATTCTTAGCATTGGCCAATAACCATCATGCTTCCTTTCTTGGGGAAGCATTGAATTGGACTCACACAGTTGCTGTCAGAAATAAGGTAGATCACCTCTGTGTCTACCTGCACGTTGAGCGCTGATATTGTGCTACATTCTTTCACAAGATGACACAAATCTCATCACAAAAGCCTCCCTTTCTCATGGCGGGGTGAGTGAAGAAGAAATTCTTCAATTGCCTCTCTCCAATCCTGAGATTTGACTTGACAAAGCTGGAGCCATACCCCTTGGAAATTTTTACCTTCCACAATGAGGTAAAGACAGAACCGCTAGATGGGGAGGGAATAATCAAATCATAAGATAAGGAACGGTAGGAAAAGCCTTTGGATGGACTAAGACTCCAAAGACGAACGTCACTTCTCTCGGAGCCAGAGCGAAACTCTCCAATTAAAGATAAAAGAGCCAGAATAGCTGTTGGTTTCCACTCAAACAATTCAAGTAGGAAAACATAGAGCAAAAGGGTCTATCCATAAACCATCTATGGTACCGAAAGTAGGTATCCTATCCTACTTTGATAGTATCGTCAACGAACTAAAGATGAGGCAATGCTAACTTATCCTTCCCTACCTCGAAACCCTCATGAATATTACCCTCCACCCCCACCCCCTTTGATACAATTCTGCTGAGAATTATCCACAACTAGCAAGAAAAGAAAAGGAGACAGCAGGTCACCTCGATTTATTATTAATGAGGTTGGAGTATTCAACTATTCTAACTCCCTCCTGCTTGCAGGCTCTATAATCCTCAAAGGCCTCATTTGCAATGAGGGTTTAGTCTATAAGATTTGCTTGCTAGCTGAAACCACCTTGGGAATTTGAATTGTCTTGGGAAGAACCTTTCTCAGCCACCTTGGCAATGATTATATACACGCTGGTATAACTAGATTAATAGGATTAAAATCCCTAACATTCCTAGCCCTTTCCTTCTGAGGTAGGAAGCATCAATAAATTATTTAGACATGAAAAAAGCATAAGTGAATAATAAAATAACGAAAAGTTTTATAAACTAGAGCTTTTGTAAGAGAGCGTTTGGAGAAACGAGCGTTTGAGATATGTTTTTCAATATCTTTATAAAATTTTAAATAAACCAGTGTGTCTCACTTCTTTGAAATGAGGTCCTCTACGAGGGCCTTTTTCAGGAGTGTTCCTAGTCATGCGTTTCAAAATGATTGTTTTAAATGTTTTTGAGATTCTTATGAAAACTCTAGCCCATTGGATCTAAGAACCCTTATGGTTATACAAACCCTTAGATCGAAAATGCTAAAAACTCTCAAATCAAGTTGAAATCAAAGATTACAAAGATGCTCTGATACCAAAGGATAAGGTGACCATAATTCTCAGCCTAATGACACGAGCTTTTGTTGAAGTAAGGACTCTTGAATCAAATAATTTAGCGCTTATGCAAATTTAAAAAATCAACTCAAGGAAAGTAAGAACCAAATTACCTTATTAATCAAATATCTCAAGGTAAGAAAACTTGTTTGAAATTCGAATCACTTCACAAGCAATATTAATCAAGTCATGTTTGAATGCTTCTAAGTATGCAACCTAAGCAACTTAGTTCTAGGCTAAGGGAAAGGACAAATGCTCTTCTTACTATATTTTTCAAGTCTTCTTTGTAAAGACGAATTATAAGGTTTTATATAGCCTCAAAGTGAAACTTTAGATCTTCCTTGAGATATTTCAAGAGGTGTAACTTTCAAAATTTATGAACATAACCGGTCATGATAAAATGTAATCTTAAAAGTGAATAAAAAGACTTCAAACTAAAAATACATGGAAAAGACATCGAGAACAGACGTTTCTAATCAGCCAACCATGTATTTGTGACCTTTCTTGCATAAATGAAGCCGCACTTGAATTAGTTTGAAGTCGTTGTTCCGTAAATGAAACTTAACTTTGTCTTGAGTTCACCATAAATGAACGTTGGCTACATTTAATGCCACTCTTGATCACATGCTTAAGCATCTTGTTTGAGTTTTGATTTATTTCTTAAGCCTAGTTTGCTTGTTTGTATTCAAAGAACGAACGTTGGCTACATTTAATGCCACTCTTGATCACATGCTTAAGCATCTTGTTTGAGTTTTGATTTATTTCTTAAGCCTAGTTTGCTTGTTTGTATTCAAAGAACGAACGTTGGCTACATTTAATGCCACTCTTGATCACATGCTTAAGCATCTTGTTTGAGTTTTGATTTATTTCTTAAGCCTAGTTTGCTTGTTTGTATTCAAAGAACGAACGTTGGCTACATTTAATGCCACTCTTGATCACATGCTTAAGCATCTTGTTTGAGTTTTGATTTATTTCTTAAGCCTAGTTTGCTTGTTTGTATTCAAAGAATGCTATTATCCATTGGATTGCAAACAATCTTGGCTTCTCTATTTAAAATTTTGAAATTTTGAGAGACGAGAATGAAAGCTTAATTTGTGAAAAAAAAAAAATAAAGAGTGCAAACACGGGTGATCTAAATTTCTCTGAGGGTTGGTATGCAAGTGAGAGAGTGTTGTGAGGTTCTTTTTTGGTATTTTTCTTAACTTGTTTTTGTAGGAAAGTTTGACAAACAGATTTGAGTACGAAACCTCTTGAAAAAGTGGAGAATGATATGACTGAAGATGACTTTATCACGTGTCTAAAATTTCAATAAAATTAAGTTGCATTAAATGCACTCCGACTTCATTCATGACAAACCAAAGTTAAACTGAAGTTAGAGTCGAGTAACGTTAAAGTTAAACTCAAGTTACAATTAATGAACTCAAGTGAAACCAAGATCAGTTACAATTAATGAACTCAAGTGAAACCAAGATCACATGAGCTTCATATATACTACAAGAGTTTCAAACCAATTTAAATGAGACTTGATTTGTTATTAGGTTTATAAATTCTTGGGTGGCTGATTGTAATCTCTTATTTTTGGATTTATGGTGTATTTTGAATATATTTTCAGGTTGTTACTGATTATAGTCATAAAGTTTCAACACGATTTCATTTTGAGGCTATATAAAGCCTTATGATTTTTCCTTTTAGCTTAAAGCTAAGTTTCTTTGCAATTCCGTACCGTTTAAACGGTATGAGTTGTCTTCAAATTCTTTTGGGAAGTTTCAAGTTTTAGATCTAAAGGTCTTTATTTCTTAGCATGGTTGTTAGTCCTGTTCCCTGGAGTTCAACATTTGCACAGATGGAAAGTCTTATGCACATGGCTCAATGTACTTGCATTGAACATGTAGAGGCTTTATTGTTTCCTATTTCTGGTGGTTATTTTCTTGAACAATTTTAACATTTGCTATTATCCAATTATGCTTAGAGTTTGCATTTTAAAGAAATCTTCAATAAACTTGCCCGTTCTTCTGTCTGCAGTGTGTCAAACTGGTGCTATGTGCACTCTGGTGAAAGTACACAAATCTTTCTAATGAGCAGATCTGCAGTTTCAGTTTCAACTCATTCTGATCGAGGTATACAAATTCTTCTAATTAGCTGATTTATGATACCGAGTTAACTTTCTACGTTCATTCCCAGAAATTAATGTTTAAATATGAGGAAACGTTATTGAATATGCAAGGGTATGAATCGAATTGAATTAGAATGAGCATACGATGATGATGAAACTGATCTCTTTTCCCAACTCCGAGCATTGTGTTCATTTTCAGGCAATTTTCAAGTGAATGTGACCCATTTATGTTTATTTCATGTCATACTTAGAAATAGAATAAAGTTTCAGTTTCCATTTGTCAGTCCGAAAATGGTTTAGAGAAAATGACCTCAATTATAATTTCAAAAGTCGATGGTTCAATCATCTATGTGAAATGATTAGCAGACCAAAGGACTACCAAGAGTAAGAGTCAAATAACAGTATATAATAAACCCAGGTATCCTGTAGGTGAGACAAATATGATAGTGGTACCCAAGTTGATCGGGGAACTCGGGATTATCGAGAATGAAAGTAAAAAAGCAACGATAAAAGTAATTTTATCAAGATGGAAGTAAATTCTGTTGATTATAGTTCTCTTTGATAGATACTTGCTATAAGACAGTCAAACAGGATAGCCATGAAGAACCTTATGAAACTACAGCATTAACATGAAACATTTCTTTCATCCCATACCCAATCTCATCATAAGCTGAAGCCTGCTAATGAAAGGAAAGTGGGTTCTGATAAACCTGTTCTTATGGAAAATTAGCACAGAAATTCATGGCTAGGAAACCTCTGCACCTTTAGCATAGAACACATAAATCATCTAAGCAAAGCCCTTACAACATCTTCCCCCTTATTCTCAAGACATTTATAATGAAATGTAAACCAAGTAGAACTCATGCAAGTTAAGTATAAAGGCTTCAGAATCAATTACAAATAGGAAGAAATCAATCGATCAAACAACAAAGTAGAAGTTTCCCATTGATCCAGGGCATCAATAAGTGGCAAGTCAACAAATTGTATAACAATTACAAATAACAAGAGCGAGCATTTGCGATCCAATAGAGTATGTTATTCACCAAACCCATGAATAAACTAAACTGTGCAACAACATTATGAAGAAACAAAAATGCTTTACCGTGCAAACCCCCTCCCTCTAGTTAGAACAGATTTGTGTAATTTGCAATGCTAATGCCTATATCGGCACATATCTCTTAACTGCCTGCTTTCCCGCAACTGCAGCTGCAGCAGCAATCCCTCCAATGGCACCGGCGATAGCGGCTGACCTCGGCCCGGAAGCCGCCTTGTAAAGTGCACCAGTCCCCAATCCGGCGACAATACTGTTCAAAACATCATCAGTACCTCTCAAATGAATAACCCCACTTTCCAAACCAGCAAAAATCAAGCCAAGAATCCCAAGAGAGTTCCCAGCCCTCCGACCGAGCTGGCCCCCAGAATTGAGAACTCGATTGAGACGGAGCTTGACAGAGTCGCCAGGCTCTGCCGCTCTGAGACCCTGAATAGAGCCTCTGGCGCCGCCGAGAAGGGCGCCAGAGAGGTAGCCAATTCCAGTATAGTACTGGAGATTTTCGCCCCAAGAACGGTGGGGCCTGGCGGCCTCTTCGAAGAAAAGATGCTCGGGGGCGGTGGGAAGCTCGTAGAGCTTTGTGATCGGAACGTGTAGGTCTTGGTAAGGGTGGTAGAAACGGGTATTCTTCCGATCATCACCTGAGTTGGAGGAATCTTCCATTGGAGGAGGAAGAAGGGATGATCGAAGGAACAGAAATTAGGGTTTGAATGAGAGTTGAATCAAAAGAGGGGGCTTCAAA TTTTCAAAAAATCAAACCAAAACGGATAAGATTTTTCCATCCTTGCCCATCTCGAGAAACCCTGATGGTATGGCACTGTCCAGGACTCCAGGAGCGTCGTACATCACTACCCTTCACCGTTTCACCACTCCCAAATCCACCAATAGAGCTTATTCGATTACAGTCATGGCCACGCCAATCCATAGCCGAATCAGACGTTGGCTTACTCTGTTCAGTATTTTACGAGCAAAAGAATGAATCTAAGTTTCGGATAATTGAAACCCTTCTTCCGAATTGATAGCAAAATCTGACGAACAAGAACAGAGGGTACCAATGGCAGGCTACGGTACAAGCGAGACCTATGCTTCTGAAATTGAATTGTTTATATCGCTTGCTGGTGATTCTGATGCTGGGATTTTGGAAGCTTTTCTTAACCCGATGAACGCTGCAGCAGCAATCCCTCCAATGGCACCGGCGATAGCGGCTGACCTCGGCCCGGAAGCCGCCTTGTAAAGTGCACCAGTCCCCAATCCGGCGACAATACTGTTCAAAACATCATCAGTACCTCTCAAATGAATAACCCCACTTTCCAAACCAGCAAAAATCAAGCCAAGAATCCCAAGAGAGTTCCCAGCCCTCCGACCGAGCTGGCCCCCAGAATTGAGAACTCGATTGAGACGGAGCTTGACAGAGTCGCCAGGCTCTGCCGCTCTGAGACCCTGAATAGAGCCTCTGGCGCCGCCGAGAAGGGCGCCAGAGAGGTAGCCAATTCCAGTATAGTACTGGAGATTTTCGCCCCAAGAACGGTGGGGCCTGGCGGCCTCTTCGAAGAAAAGATGCTCGGGGGCGGTGGGAAGCTCGTAGAGCTTTGTGATCGGAACGTGTAGGTCTTGGTAAGGGTGGTAGAAACGGGTATTCTTCCGATCATCACCTGAGTTGGAGGAATCTTCCATTGGAGGAGGAAGAAGGGATGATCGAAGGAACAGAAATTAGGGTTTGAATGAGAGTTGAATCAAAAGAGGGGGCTTCAAA ATGGCAGGCTACGGTACAAGCGAGACCTATGCTTCTGAAATTGAATTGTTTATATCGCTTGCTGGTGATTCTGATGCTGGGATTTTGGAAGCTTTTCTTAACCCGATGAACGCTGCAGCAGCAATCCCTCCAATGGCACCGGCGATAGCGGCTGACCTCGGCCCGGAAGCCGCCTTGTAA MAGYGTSETYASEIELFISLAGDSDAGILEAFLNPMNAAAAIPPMAPAIAADLGPEAAL Homology
BLAST of Cp4.1LG05g08430 vs. NCBI nr
Match: KAG7033437.1 (hypothetical protein SDJN02_07493 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109 bits (273), Expect = 5.74e-30 Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. NCBI nr
Match: KAG6590278.1 (hypothetical protein SDJN03_15701, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.9 bits (180), Expect = 1.42e-15 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. NCBI nr
Match: XP_023002022.1 (putative pseudouridine synthase C1A4.09 isoform X2 [Cucurbita maxima]) HSP 1 Score: 52.4 bits (124), Expect = 6.98e-06 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. NCBI nr
Match: XP_023002005.1 (multisubstrate pseudouridine synthase 7 isoform X1 [Cucurbita maxima] >XP_023002013.1 multisubstrate pseudouridine synthase 7 isoform X1 [Cucurbita maxima]) HSP 1 Score: 52.4 bits (124), Expect = 7.00e-06 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. NCBI nr
Match: XP_022159173.1 (pseudouridylate synthase 7 homolog [Momordica charantia]) HSP 1 Score: 50.1 bits (118), Expect = 4.59e-05 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. ExPASy TrEMBL
Match: A0A6J1KIA3 (putative pseudouridine synthase C1A4.09 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496015 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.38e-06 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. ExPASy TrEMBL
Match: A0A6J1KMR0 (multisubstrate pseudouridine synthase 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496015 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.39e-06 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. ExPASy TrEMBL
Match: A0A6J1DY30 (pseudouridylate synthase 7 homolog OS=Momordica charantia OX=3673 GN=LOC111025594 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.22e-05 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. ExPASy TrEMBL
Match: A0A6J1F560 (multisubstrate pseudouridine synthase 7 OS=Cucurbita moschata OX=3662 GN=LOC111440943 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.69e-05 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of Cp4.1LG05g08430 vs. ExPASy TrEMBL
Match: A0A0A0M0H8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690310 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.05e-04 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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