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Cp4.1LG05g08410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATCATCACTATCATCATCGTCATCGTGCCCGTCACTCCACGAGTCGGAGGACGAGCTGAAACACATGCCATTGGCACCGCCACGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTGGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAATGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGTACCTCGTCGTCATCTCTCGGCGCAAGGTCTTCATCGTTCGAGAGCCCCAAAAGTGAGTCTGAGACATGGAAGGTTTGCAGTCCAGGTACGTGAACATAGCTATTGTTAATGTGTTAGGAATCACGAATCTCCATTGGTATGAGATTCAAGCTATGAGAGGTTATACTCGAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTGTAACAAAATGAAGCTAATTTCGAGTCGAATTTTGATGGATTTAGGGGAAGATCCAAAGCAAGTGAAGGCAAAATTGAGACATTGGGCACAAGCTGTGGCATGTTCGGTGATGCAATCATTGGGAGAACATAAAGGGAAATTTTGAGGAAAGATATTGTACAGATCAGAGGAGTAAGAAGGAAAAAAAAAATAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGGCAGAAGGGGTTTGGTTTCGAACCTTTGAATTAGGGATTGGTGCAACTTATAAGGTTAAATTAATCCTGCAATTCTCTTGTAGTTTTAACAACAAAAAAGGTGTCACTCTGGTTTGGAGCTAGCTTATTATATATAATGTGAGGGCCAAAGGAGAAGCCAGAGGCATTTAATGGGAACTTTGGTATATAATTAACTTAGGGGGGAAATATGTTCTTTTTCTTTCTCATTATTTAATGTTCATTGTACTTCTATACAAACATATATATACATATATAACTATATTTTTCTGTGTTCTTACCCATATCTTACCCGTTCATTCTGTTTTTGCATTTTGATCTGTGATCAGGGCTTTAG ATGCCATCATCACTATCATCATCGTCATCGTGCCCGTCACTCCACGAGTCGGAGGACGAGCTGAAACACATGCCATTGGCACCGCCACGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTGGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAATGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGTACCTCGTCGTCATCTCTCGGCGCAAGGTCTTCATCGTTCGAGAGCCCCAAAAGGCTTTAG ATGCCATCATCACTATCATCATCGTCATCGTGCCCGTCACTCCACGAGTCGGAGGACGAGCTGAAACACATGCCATTGGCACCGCCACGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTGGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAATGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGTACCTCGTCGTCATCTCTCGGCGCAAGGTCTTCATCGTTCGAGAGCCCCAAAAGGCTTTAG MPSSLSSSSSCPSLHESEDELKHMPLAPPRQKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNASTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSSSSLGARSSSFESPKRL Homology
BLAST of Cp4.1LG05g08410 vs. NCBI nr
Match: XP_023533045.1 (uncharacterized protein LOC111795047 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279 bits (714), Expect = 9.36e-94 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. NCBI nr
Match: KAG6590284.1 (hypothetical protein SDJN03_15707, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 277 bits (708), Expect = 1.83e-93 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. NCBI nr
Match: XP_022960867.1 (uncharacterized protein LOC111461542 [Cucurbita moschata]) HSP 1 Score: 275 bits (703), Expect = 4.44e-92 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. NCBI nr
Match: XP_022987465.1 (uncharacterized protein LOC111485003 [Cucurbita maxima]) HSP 1 Score: 274 bits (700), Expect = 1.27e-91 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. NCBI nr
Match: XP_038878789.1 (uncharacterized protein LOC120070939 [Benincasa hispida]) HSP 1 Score: 266 bits (680), Expect = 1.12e-88 Identity = 136/143 (95.10%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. ExPASy TrEMBL
Match: A0A6J1H8L6 (uncharacterized protein LOC111461542 OS=Cucurbita moschata OX=3662 GN=LOC111461542 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 2.15e-92 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. ExPASy TrEMBL
Match: A0A6J1JGY3 (uncharacterized protein LOC111485003 OS=Cucurbita maxima OX=3661 GN=LOC111485003 PE=4 SV=1) HSP 1 Score: 274 bits (700), Expect = 6.15e-92 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. ExPASy TrEMBL
Match: A0A5D3DZ79 (Ankyrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001240 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 1.27e-87 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. ExPASy TrEMBL
Match: A0A5A7V807 (Ankyrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00220 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 2.77e-87 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. ExPASy TrEMBL
Match: A0A1S3CHL5 (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 3.64e-87 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. TAIR 10
Match: AT1G08790.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35 Identity = 92/143 (64.34%), Postives = 103/143 (72.03%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. TAIR 10
Match: AT5G28690.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-30 Identity = 89/151 (58.94%), Postives = 99/151 (65.56%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. TAIR 10
Match: AT3G04700.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29 Identity = 77/122 (63.11%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. TAIR 10
Match: AT3G04710.3 (ankyrin repeat family protein ) HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29 Identity = 77/122 (63.11%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Cp4.1LG05g08410 vs. TAIR 10
Match: AT2G43340.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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