![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG05g08200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCGTCGGCGTCCTAGCATTGCAGGGATCTTATAACGAGCACATCGCAGGCATTTTCTCCTCCTCCTCCTCCTTCTTCTCTATCGCTAGCTCCATCTGTAATAGGCGTTTCTACGGATATTTCATTTCCTTTCATTTCGTTATCTTTTTCTTATTACGAGTTTTCGGCCTTAATTGATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGGTTTGTTCCTCTTTTCTTTAGACGTTGCTACATCTGTATTCGTCTTTAAAGATTTTCTTTAGTTTGGCCGAAATACATTAAGAGCGAACACGTGAGTAAGGGGAAAAGTTGTAAGATCTTGCATTCAATCGTGAACCAAACAGAAATGTAATCTTTAATTTAAAATTTGTTGAACGCTATTTTATCGGGTTAGACATACCAACATCCCAAATGTATGAAACGATCGTCTGTGTAACTCTGGATTGGTTAATTTCTGATAATAGATAGAACTAAAATCGAGTATAGTATTTATATTGTGGTATTTTTGTGTATTGCAGTTTCCCTCTCTTCGAGAGTTCGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGTAGACTTCCTTCCATTTTCCCTCAATAAAATGCTTGAAATGTGTTTCAAACTTGATTGGATACAGTATATACATGTATTTTCAGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGTAGTCAGGTAACTCTGGTTTCTCATGTTGGGTTGTGCTGTCAAAATGGATGAGCAATATCTGGTAAACAAAAGAACCTTGGGAATTAGTACAGAACATGCATAGGATATTAGGAATCAAATTTGCATGAAGGCGGCCTCTGCCTGTGTTGTTTTGTTGCAGACATGGATTTGTCCCATCAAAAAATGACTTTGTATCAACTCAAATAATGACTTTGTCCCATAAAAAACGCACGTACTTGGTCTAAATCCTCCGTATGATAAGCATCATGAGAACTGGTAAAATGAAGTTTGTGAGAACGAGTGCCAATAAAAATGATGGGCCTTGAAGGGGGGTGGATGGTGTGAAAACCTCTCTCTAGTAGCTCGTTTTAAAAACCTTGAAAGAAAAGCTGAAAGAAAAAGTCCAAAGAGAACAATATCTCCTAGCAGTGGGCTTGAGCTGTTATAAAGTTTTAGTTGAAGTGTGGAATTAATCCTCGATGGTTTCTGTTGTACATAAGCTGATCCAAACACCGTTATCCAATGAACTTCTGCTTAGATTTTGTTTCCGAATGTTCACTTTCTTTTCCTGAATACCAGTATTACTAAAAAGTATAGCAAGCCCCTTTAACTTGATGTTGAAGTTCGCTTTATTTTCACTGTCAATTTCTTGAGTTCAGATTTTCCTAATTTAAGAAGATCATGATTATCTAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTGCCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTTGTTTTCTTTCATCATTCCTTGATCTCGTATGATCTATACACTGCTATTGCCACTAATTTGTACGTCTAAATGATTGTTATCTGTATACATGAGGCAAAAGTTTCAGACTATAAGCTCATTTGTCTTGCGAGATCACACCAATTGGGGAGGAGAACGAATCATTCTTTATAAAGGTGTCGAAACCTCCCACTAGCAGACGCGTTTTGAAAACCTTGAGGGGAGTCCGAAAGGGAAAGCCCAAATAGTACAATATCTGCTAGCGGTGGGATTTGGCTGTTACAAATGGTATTAGAGCCAAGTTTCGATCCTAGGACCTATGGATTTGGGCTTGGGCTGTTACATGTCTCCACTGGAGTTTGCTTTTGCGTTCGTTTTCCTCCTATCCCTTGACACTGCGGTTTGAATATCTCAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGTATAGTGTAGTTTTACCTTGAAATACATCACTTAATATTATGATGATCATCTCATGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCAGCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCAGCTCAATTGAGTTAATAACGATGAATTATGCATCTCAATTGAGTTAATAACGATGAATTATGCAGGCACAGTTACTTTTTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCTCAACTCAGTTTTACATTTTTCAAGTTTCATTGCAGGTTCAATCTTTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTACTCACTTTCACGACGCATTATTTTAAAGAACAATATTTTAATTATATATATATATTTTTTTTTTTGGAAATTATAGTCTTAATTTAAAAATAAAAATAAAAATACTGTATATCACTCAGAGTTCAGTATGTA ATGGCGACCAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTTCGAGAGTTCGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGTAGTCAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTGCCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTTTTTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCTCAACTCAGTTTTACATTTTTCAAGTTTCATTGCAGGTTCAATCTTTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTACTCACTTTCACGACGCATTATTTTAAAGAACAATATTTTAATTATATATATATATTTTTTTTTTTGGAAATTATAGTCTTAATTTAAAAATAAAAATAAAAATACTGTATATCACTCAGAGTTCAGTATGTA ATGGCGACCAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCTGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTTCGAGAGTTCGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCTGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACCGTTCACAGAAACTTCTTTGGTAGTCAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTGCCTTGCATTCAAATTCCTCTGGTGAAGGCAAAGAGGAAAAAGGTGCAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTTTTTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAG MATSVEIKKPEQLLDVASLIIPGGESTTMAKLAELHNLFPSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFETELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSALHSNSSGEGKEEKGAEDKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEGSSSSIASIGVDNSRFERSNIDLPIFL Homology
BLAST of Cp4.1LG05g08200 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.0e-85 Identity = 158/228 (69.30%), Postives = 189/228 (82.89%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy Swiss-Prot
Match: Q54J48 (Probable pyridoxal 5'-phosphate synthase subunit pdx2 OS=Dictyostelium discoideum OX=44689 GN=pdx2 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 6.0e-38 Identity = 84/200 (42.00%), Postives = 124/200 (62.00%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy Swiss-Prot
Match: Q6AFB8 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=pdxT PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.7e-37 Identity = 89/192 (46.35%), Postives = 107/192 (55.73%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy Swiss-Prot
Match: Q81ZV5 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=pdxT PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-36 Identity = 88/194 (45.36%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.6e-36 Identity = 88/197 (44.67%), Postives = 117/197 (59.39%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. NCBI nr
Match: XP_023534477.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449 bits (1154), Expect = 1.45e-158 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. NCBI nr
Match: XP_023534476.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449 bits (1154), Expect = 2.59e-158 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. NCBI nr
Match: XP_022958104.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 444 bits (1141), Expect = 1.39e-156 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. NCBI nr
Match: XP_022958103.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 444 bits (1141), Expect = 2.39e-156 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. NCBI nr
Match: KAG7013900.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 434 bits (1117), Expect = 3.68e-153 Identity = 223/235 (94.89%), Postives = 223/235 (94.89%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy TrEMBL
Match: A0A6J1H447 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 444 bits (1141), Expect = 6.73e-157 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy TrEMBL
Match: A0A6J1H276 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 444 bits (1141), Expect = 1.16e-156 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy TrEMBL
Match: A0A5D3CR96 (Glutaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00240 PE=3 SV=1) HSP 1 Score: 412 bits (1059), Expect = 1.59e-144 Identity = 204/223 (91.48%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1) HSP 1 Score: 412 bits (1059), Expect = 2.12e-144 Identity = 204/223 (91.48%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. ExPASy TrEMBL
Match: A0A0A0KAR5 (Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1) HSP 1 Score: 410 bits (1053), Expect = 1.74e-143 Identity = 204/223 (91.48%), Postives = 214/223 (95.96%), Query Frame = 0
BLAST of Cp4.1LG05g08200 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 ) HSP 1 Score: 317.8 bits (813), Expect = 7.2e-87 Identity = 158/228 (69.30%), Postives = 189/228 (82.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|