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Cp4.1LG05g08170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGAAAAAAAAAAGAAATTAGCAGCGTTCAATACGTTTGTTCCTGTACAGCTATATATGTAACCACACCACAGCCTTGTTTCTCCACCAACGTGAACCACCCACAAACTTCTTTACCTCTACGACACTGAATCTGAGGCAAATTTCTAACCATTTCTCGCATACCCATTTCACAAAGTTCATCAATGGAGAAGGAAAACGAACCCAAATCACCAATTTTCAAGAGGATTTGTGTGTTCTGTGGTAGCAGCCCTGGCAAGAAGACTAGTTATAAAGATGCTGCCATTGAGCTTGGAAGAGAACTGGTAAAATCTCTCTGTTTTTTCTCCCCTCTATGTCTCTGTTCCTTATTTGAAGTGGGTTTGTTCATAATTTTAGCAATGAATTGGGATTTTGGGTTGTTCTATCAATTGATTGATTGACAGTTTTTTTTATGGCTTTTTTGTTGGAAGGTCTCGAGGGATATTGATCTTGTTTATGGTGGAGGGAGTGTTGGATTGATGGGATTAGTCTCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGGTTTGTTTTTGTTTTTCCTTTTGCCATTTTCAGGAGCTTTAACATCATGAAAATGGTGATAATTACTCATTTCCTTTTGAATTTTGCAGTGTTATCCCCAAAACGCTTATGCCAAGGGAGGTATGTTTACTATGATTCCATTCCACTGTTATATCAAGTGTTTTGACTCGTTACGTATTACTACGGAGACGTTTTTACAATATTAAAAAGAATGTTTCGAGTTATATGAAACCATTTGGGTAAAAAAAACATGAGGTTTGAATGGTGTGACACATATGGAGTCACTGTGTTCAGTAACATACAGTGAACTAACACACAAATTTGGCATAAAATGGGAAGGGAGTTAGTATGGGGATTGAAATGAGAGGCAGTGACTGACTTTTGCAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCCAGGCGTTCTGATGCCTTTATTGCCTTACCTGGTTCGTCTTTTCTTCTCTTTTCTCTTCAATCACTATGCATAATTTGTCTGTTGCTGCTCCATTTCGCCCTGTTTTGGGCCCCAACCTCCAAGAGCCTTAGCCAAAATAGACTCACCCCAACATTTAATATGCATAGCTACTCTACAATGTTCAAAACATAGTAATTAAAGAGTTTATTATGTGATTAGAATGTTTTTTCTATGAAAAGATTAAACAGAGGAACGTTTTGATTATGAACAATCTCTGACAGAAGAAATTAAGGGGCAGCCTTTTTCCTGAGAATTCTGTGGTATGGCTGCCAATATGGCAGCCTACAACCTACAATTCAAGGGTACCATCCTTAGCTCTGGAGAAAGAAAGAAAAAAAGGGAGAAATTATAACAGATGGTCCCTAGCTCCCCACCCCACCCCACCCCACCTCTTATAGCTTACTCTCAACGTTTGAAAACACATGGGTTAGAGAGTGGTTTCTACACCTTTATAAGAATTGTTTCGTTCTTTTCTCCAACTTAGGTAGGATCTCACAATCCACCTCCTTGGAGCTAGCGTTCTTGTTGACACACCGCTCGATGACTGGCTTAGATACCATTTGTAACAGCCTAAATCCACTGTCAGCAGATATTGTTCTCTTTGGACTTTCCTTTAAGGCTTTTAAAACGCGTTTTAAAACTTTGAGTAGACCAAAGAAGACAATATCTGCTAGCGGTGGACTAACTCTTATACCCCAAGGTTACCGGACATTGTCCTTTTGGGCTTAAGGTTCTTATTAACTCACATAGAACCCATTTGCAGGCCCAACTAATTTAGCTCCTTTTTGATGAAGGTGGGTATGGAACTTTGGAAGAGCTGCTTGAGGTCATCACCTGGGCTCAACTGGGAATTCATGATAAACCAGTAAGCCATATCATTGCTATTCCAAAACGTGTGATGTTTTATCAGTGATCAACATGAAGTGAGTTGAGTTGTTGTTCAGGTTGGACTGTTGAATGTGGATGGATACTACAATTCATTGCTGTCCTTCATTGATCAAGCGGTGGAGGAAGGTTTTATCAGCCCAAGTGCTCGCCATATCATTGTGTCTGCACCTAATGCAAAGGAGTTAGTGAAGAAAATGGAGGTAAAACCAGGCAAATGTTTTAGTTTGTTGAACCAATTTGAAAATGGATATTGAAATGGTAGGCTTTGTGATATCAGGAGTATGTTCCACGGCATGAAAGAGTGGCTTCAAAGCTTAGCTGGGAGAGTGAACAAATAGGGTACCCTACAAAATGTGATATCTCAAGGTGAAGAGATGAGTGGAAGGCACTAATTTGATTTAGAAGACCAACGAATTTGCTGAAGTTGGGTTTGTTTTTGTTTTGTTTTTCTGCTTCTGCTTCTGTAAACTACCAAGAAAAAGGTGGAGAAGAAAAACTGACATCAAAAAAAAAAAAAAAAAGGTTTAAGAGTCTTATGTAGTTTGGTTGGAGCTTGGCTTCCTTGTTAGCTGTGTCCTAATTGTTTGTTGTTCAAAAGTCATGGAAGCTTACCTTACCTTAGCTTAGATCAAATCAATGTTGTCTCGACCATTCTCTCGTTTGTTCGATTCACTAATTCAATTTTCGATCAAGAATCAACGAAATGACGAACAGAGCTTCATGTTGTGGTATA GAAAAGAAAAAAAAAAGAAATTAGCAGCGTTCAATACGTTTGTTCCTGTACAGCTATATATGTAACCACACCACAGCCTTGTTTCTCCACCAACGTGAACCACCCACAAACTTCTTTACCTCTACGACACTGAATCTGAGGCAAATTTCTAACCATTTCTCGCATACCCATTTCACAAAGTTCATCAATGGAGAAGGAAAACGAACCCAAATCACCAATTTTCAAGAGGATTTGTGTGTTCTGTGGTAGCAGCCCTGGCAAGAAGACTAGTTATAAAGATGCTGCCATTGAGCTTGGAAGAGAACTGGTCTCGAGGGATATTGATCTTGTTTATGGTGGAGGGAGTGTTGGATTGATGGGATTAGTCTCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGTGTTATCCCCAAAACGCTTATGCCAAGGGAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCCAGGCGTTCTGATGCCTTTATTGCCTTACCTGGTGGGTATGGAACTTTGGAAGAGCTGCTTGAGGTCATCACCTGGGCTCAACTGGGAATTCATGATAAACCAGTTGGACTGTTGAATGTGGATGGATACTACAATTCATTGCTGTCCTTCATTGATCAAGCGGTGGAGGAAGGTTTTATCAGCCCAAGTGCTCGCCATATCATTGTGTCTGCACCTAATGCAAAGGAGTTAGTGAAGAAAATGGAGGAGTATGTTCCACGGCATGAAAGAGTGGCTTCAAAGCTTAGCTGGGAGAGTGAACAAATAGGGTACCCTACAAAATGTGATATCTCAAGGTGAAGAGATGAGTGGAAGGCACTAATTTGATTTAGAAGACCAACGAATTTGCTGAAGTTGGGTTTGTTTTTGTTTTGTTTTTCTGCTTCTGCTTCTGTAAACTACCAAGAAAAAGGTGGAGAAGAAAAACTGACATCAAAAAAAAAAAAAAAAAGGTTTAAGAGTCTTATGTAGTTTGGTTGGAGCTTGGCTTCCTTGTTAGCTGTGTCCTAATTGTTTGTTGTTCAAAAGTCATGGAAGCTTACCTTACCTTAGCTTAGATCAAATCAATGTTGTCTCGACCATTCTCTCGTTTGTTCGATTCACTAATTCAATTTTCGATCAAGAATCAACGAAATGACGAACAGAGCTTCATGTTGTGGTATA ATGGAGAAGGAAAACGAACCCAAATCACCAATTTTCAAGAGGATTTGTGTGTTCTGTGGTAGCAGCCCTGGCAAGAAGACTAGTTATAAAGATGCTGCCATTGAGCTTGGAAGAGAACTGGTCTCGAGGGATATTGATCTTGTTTATGGTGGAGGGAGTGTTGGATTGATGGGATTAGTCTCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGTGTTATCCCCAAAACGCTTATGCCAAGGGAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTGGCAGACATGCACCAAAGGAAGGCCGAGATGGCCAGGCGTTCTGATGCCTTTATTGCCTTACCTGGTGGGTATGGAACTTTGGAAGAGCTGCTTGAGGTCATCACCTGGGCTCAACTGGGAATTCATGATAAACCAGTTGGACTGTTGAATGTGGATGGATACTACAATTCATTGCTGTCCTTCATTGATCAAGCGGTGGAGGAAGGTTTTATCAGCCCAAGTGCTCGCCATATCATTGTGTCTGCACCTAATGCAAAGGAGTTAGTGAAGAAAATGGAGGAGTATGTTCCACGGCATGAAAGAGTGGCTTCAAAGCTTAGCTGGGAGAGTGAACAAATAGGGTACCCTACAAAATGTGATATCTCAAGGTGA MEKENEPKSPIFKRICVFCGSSPGKKTSYKDAAIELGRELVSRDIDLVYGGGSVGLMGLVSQAVHNGGRHVVGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDQAVEEGFISPSARHIIVSAPNAKELVKKMEEYVPRHERVASKLSWESEQIGYPTKCDISR Homology
BLAST of Cp4.1LG05g08170 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 5.7e-102 Identity = 182/207 (87.92%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 6.5e-98 Identity = 172/202 (85.15%), Postives = 192/202 (95.05%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97 Identity = 171/207 (82.61%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 1.8e-95 Identity = 169/205 (82.44%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 8.8e-95 Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. NCBI nr
Match: XP_022957761.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita moschata] >XP_023534492.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita pepo subsp. pepo] >KAG7035473.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 435 bits (1118), Expect = 9.72e-154 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. NCBI nr
Match: XP_022995003.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita maxima]) HSP 1 Score: 433 bits (1114), Expect = 3.96e-153 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. NCBI nr
Match: KAG6605555.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 435 bits (1118), Expect = 1.79e-152 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. NCBI nr
Match: XP_004145748.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucumis sativus] >XP_008463955.1 PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucumis melo] >KGN46845.1 hypothetical protein Csa_021091 [Cucumis sativus]) HSP 1 Score: 422 bits (1085), Expect = 1.05e-148 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. NCBI nr
Match: XP_038902690.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Benincasa hispida]) HSP 1 Score: 421 bits (1083), Expect = 2.11e-148 Identity = 211/218 (96.79%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy TrEMBL
Match: A0A6J1H054 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111459209 PE=3 SV=1) HSP 1 Score: 435 bits (1118), Expect = 4.71e-154 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy TrEMBL
Match: A0A6J1K6N5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111490689 PE=3 SV=1) HSP 1 Score: 433 bits (1114), Expect = 1.92e-153 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy TrEMBL
Match: A0A0A0KAT1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G141420 PE=3 SV=1) HSP 1 Score: 422 bits (1085), Expect = 5.06e-149 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy TrEMBL
Match: A0A1S3CKD9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103501957 PE=3 SV=1) HSP 1 Score: 422 bits (1085), Expect = 5.06e-149 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. ExPASy TrEMBL
Match: A0A5D3CV75 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00090 PE=3 SV=1) HSP 1 Score: 419 bits (1076), Expect = 1.11e-147 Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 371.7 bits (953), Expect = 4.0e-103 Identity = 182/207 (87.92%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 358.2 bits (918), Expect = 4.6e-99 Identity = 172/202 (85.15%), Postives = 192/202 (95.05%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 347.8 bits (891), Expect = 6.2e-96 Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 342.4 bits (877), Expect = 2.6e-94 Identity = 171/226 (75.66%), Postives = 191/226 (84.51%), Query Frame = 0
BLAST of Cp4.1LG05g08170 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 334.0 bits (855), Expect = 9.3e-92 Identity = 165/200 (82.50%), Postives = 183/200 (91.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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