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Cp4.1LG05g08020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCGGTACATGGAAGAAACTCAAGATGGCTTTTGGGACTCGTATGTGTCTCCATCTTCCTCGTGTTGCTGGGGATTCGACGCCGTCTAGTAATGTTGCTCCCATGTCCTCTGAGGCCGTTTCTCCGATGGGTAGTGCTTCAAATTGCCGCCAATCTTCGCCGATTCATTCTTCGTCTAGTTCCCGTGTATCCAAAAGCGGATCAAGGTCTTCTAGGGTAATGATTCTGTTTTCTCGTTATTCGAATTGTCGATTAATTGCCTATTTCAATTCAATTGTGTTTGGTGGGTTGTGTTATCTTCTTTTGAAATCTTGTTACTCTTTTGGTTTTTGATTCTAGGTTGTTTTGAATACTCTTCCTATGATTGTTCTTTTTGTATTCGATCAGTTTTTTCGTAGAATATCTATGACGGATTCTTACTGA ATGACCGGTACATGGAAGAAACTCAAGATGGCTTTTGGGACTCGTATGTGTCTCCATCTTCCTCGTGTTGCTGGGGATTCGACGCCGTCTAGTAATGTTGCTCCCATGTCCTCTGAGGCCGTTTCTCCGATGGGTAGTGCTTCAAATTGCCGCCAATCTTCGCCGATTCATTCTTCGTCTAGTTCCCGTGTATCCAAAAGCGGATCAAGGTCTTCTAGGGTTGTTTTGAATACTCTTCCTATGATTGTTCTTTTTGTATTCGATCAGTTTTTTCGTAGAATATCTATGACGGATTCTTACTGA ATGACCGGTACATGGAAGAAACTCAAGATGGCTTTTGGGACTCGTATGTGTCTCCATCTTCCTCGTGTTGCTGGGGATTCGACGCCGTCTAGTAATGTTGCTCCCATGTCCTCTGAGGCCGTTTCTCCGATGGGTAGTGCTTCAAATTGCCGCCAATCTTCGCCGATTCATTCTTCGTCTAGTTCCCGTGTATCCAAAAGCGGATCAAGGTCTTCTAGGGTTGTTTTGAATACTCTTCCTATGATTGTTCTTTTTGTATTCGATCAGTTTTTTCGTAGAATATCTATGACGGATTCTTACTGA MTGTWKKLKMAFGTRMCLHLPRVAGDSTPSSNVAPMSSEAVSPMGSASNCRQSSPIHSSSSSRVSKSGSRSSRVVLNTLPMIVLFVFDQFFRRISMTDSY Homology
BLAST of Cp4.1LG05g08020 vs. NCBI nr
Match: XP_023534385.1 (uncharacterized protein LOC111795962 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023534386.1 uncharacterized protein LOC111795962 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137 bits (345), Expect = 4.00e-35 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. NCBI nr
Match: XP_022957762.1 (uncharacterized protein LOC111459211 [Cucurbita moschata]) HSP 1 Score: 136 bits (342), Expect = 1.03e-34 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. NCBI nr
Match: KAG6605557.1 (Exosome complex component RRP41-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136 bits (342), Expect = 1.23e-34 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. NCBI nr
Match: XP_022994994.1 (uncharacterized protein LOC111490682 [Cucurbita maxima]) HSP 1 Score: 135 bits (340), Expect = 1.94e-34 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. NCBI nr
Match: XP_022986144.1 (uncharacterized protein LOC111483976 [Cucurbita maxima]) HSP 1 Score: 97.8 bits (242), Expect = 3.80e-21 Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. ExPASy TrEMBL
Match: A0A6J1H011 (uncharacterized protein LOC111459211 OS=Cucurbita moschata OX=3662 GN=LOC111459211 PE=4 SV=1) HSP 1 Score: 136 bits (342), Expect = 4.99e-35 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. ExPASy TrEMBL
Match: A0A6J1K4E9 (uncharacterized protein LOC111490682 OS=Cucurbita maxima OX=3661 GN=LOC111490682 PE=4 SV=1) HSP 1 Score: 135 bits (340), Expect = 9.37e-35 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. ExPASy TrEMBL
Match: A0A6J1JF95 (uncharacterized protein LOC111483976 OS=Cucurbita maxima OX=3661 GN=LOC111483976 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.84e-21 Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. ExPASy TrEMBL
Match: A0A5A7SZJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00040 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.09e-17 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of Cp4.1LG05g08020 vs. ExPASy TrEMBL
Match: A0A6J1CGQ7 (uncharacterized protein LOC111011359 OS=Momordica charantia OX=3673 GN=LOC111011359 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.52e-17 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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