Cp4.1LG05g07050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g07050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionVARLMGL domain-containing protein
LocationCp4.1LG05: 4258848 .. 4260562 (-)
RNA-Seq ExpressionCp4.1LG05g07050
SyntenyCp4.1LG05g07050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGACACCGCCCCTCACTACCGAGCTGTATGAACACCCTCTTTCATTTCTTTGATTCCCATTCCTTTCCTTCCACTCACTTAGCCCCCAATAAGCCCCACACATCCTCTTTAGACCATGTTTGTTCTTCAGGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAGTAAATTTTACTTTTTGTTGCATTAATTTTCAAAGAACAATGTAATTTTCTAATCATATGTTTTGAAATGCAGATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACACCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTACCGAACAGCCCGAGAGTATCCTCGTCAAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCACTCGATATTAACTTGGACAAAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACATGACGATGTCTAGGAAGCATAGCTCGATATCGACACCGACACCGACACTGACGCTGACACCGATGCCGAAACCGAAGCCAAAGGCAAAGCCTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGGTGCTATAATATATATATATATTATCAATTTTATAATTTTTATTATTCTCTTAAAAAACCTTAGTCTATTTTTTAATTTCGAATATTTCAGTTTTTTTTCTCTTTATTTTTGTAATTCTTAATATATATGAATAATATAATACAACTTTAATTTAAAAGCTAAGAAAAATAAATCTTGAAATTTTTAATGATAAAATATTTTTAAAAAATAGCTGCAAAATTGAAACATTGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTGGAAATTTATAAAAAAAAAAAATACGACAATTTTAAAATTTTAAAATTTTAAAAGCATTATTTTCAAGCGTATGAAAAATATGTTTGAAATTTCATAATTGTACGGGCTAAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAAGGGGAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGGGAGTTGAAATACATAAAAAGAATATTAAGTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGTTGGAGCGGTGGAACAAGGATGATGATGAAGTGTTGGGGGAAATGGTGAAGAATTGTAGAACAAGGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTTCTGGAAGACATGGATTTCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGATGTTGGAATTGGAAGGGGTCGTCAGGATCTTTGAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTTTGTCCCTACATAAACGCTGTCGTTTTGTAGCCTTCGATTTGTCCTCA

mRNA sequence

ATGGCCAAACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGACACCGCCCCTCACTACCGAGCTGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACACCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTACCGAACAGCCCGAGAGTATCCTCGTCAAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCACTCGATATTAACTTGGACAAAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACATGACGATGTCTAGGAAGCATAGCTCGATATCGACACCGACACCGACACTGACGCTGACACCGATGCCGAAACCGAAGCCAAAGGCAAAGCCTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAAGGGGAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGGGAGTTGAAATACATAAAAAGAATATTAAGTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGTTGGAGCGGTGGAACAAGGATGATGATGAAGTGTTGGGGGAAATGGTGAAGAATTGTAGAACAAGGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTTCTGGAAGACATGGATTTCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGATGTTGGAATTGGAAGGGGTCGTCAGGATCTTTGAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTTTGTCCCTACATAAACGCTGTCGTTTTGTAGCCTTCGATTTGTCCTCA

Coding sequence (CDS)

ATGGCCAAACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGACACCGCCCCTCACTACCGAGCTGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACACCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTACCGAACAGCCCGAGAGTATCCTCGTCAAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCACTCGATATTAACTTGGACAAAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACATGACGATGTCTAGGAAGCATAGCTCGATATCGACACCGACACCGACACTGACGCTGACACCGATGCCGAAACCGAAGCCAAAGGCAAAGCCTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAAGGGGAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGGGAGTTGAAATACATAAAAAGAATATTAAGTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGTTGGAGCGGTGGAACAAGGATGATGATGAAGTGTTGGGGGAAATGGTGAAGAATTGTAGAACAAGGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTTCTGGAAGACATGGATTTCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGATGTTGGAATTGGAAGGGGTCGTCAGGATCTTTGAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTTTGTCCCTACATAAACGCTGTCGTTTTGTAGCCTTCGATTTGTCCTCA

Protein sequence

MAKQWLFGGTSSPRRAPIDRHRHRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTNFDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDKENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDMTMSRKHSSISTPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKVRHEQSFPKQRCRFPKGKQRPAAEEVGRRATADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDDEVLGEMVKNCRTRMMMKGWELARAKCHVLEDMDFLIDKDLGKWKKMLELEGVVRIFEFHILDSLLRETTATILSLHKRCRFVAFDLSS
Homology
BLAST of Cp4.1LG05g07050 vs. NCBI nr
Match: XP_022958521.1 (uncharacterized protein LOC111459727 [Cucurbita moschata])

HSP 1 Score: 669 bits (1726), Expect = 8.29e-241
Identity = 349/383 (91.12%), Postives = 359/383 (93.73%), Query Frame = 0

Query: 1   MAKQWLFGGTSSPRRAPIDRHRHRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60
           MA+QWLFGGTSSPRRAPIDRHRHRH PSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN
Sbjct: 1   MARQWLFGGTSSPRRAPIDRHRHRHHPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60

Query: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRH 120
           FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSS RLSDVDRHHHRH
Sbjct: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSLRLSDVDRHHHRH 120

Query: 121 SLDINLDKENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDMTMSRKHSSIS 180
           SLDINLD ENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQD+TM RKH+SIS
Sbjct: 121 SLDINLDIENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDVTMFRKHNSIS 180

Query: 181 TPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKVRHEQSFPKQRCRFPKGKQRPAAEEV 240
           T TPT    P PK KP+A  REEKEEESPPPAAKVRHEQ     RCRFP GKQRPAAEEV
Sbjct: 181 TQTPT----PTPKRKPRATTREEKEEESPPPAAKVRHEQ-----RCRFPNGKQRPAAEEV 240

Query: 241 GRRATADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD 300
           GRRATADGGAGELKYIKRIL+SPNWFSPTNPLNPSIFHHLETS+AAVGEPRLERWNKDDD
Sbjct: 241 GRRATADGGAGELKYIKRILTSPNWFSPTNPLNPSIFHHLETSNAAVGEPRLERWNKDDD 300

Query: 301 -EVLGEMVKNCRTRMMM-KGWELARAKCHVLEDMDFLIDKDLGKWKKMLELEGVVRIFEF 360
            EVLGEMV NCRTRMMM KGWELARAKCHVL+D+D LIDKDLGKWKK+LELEGVVR FEF
Sbjct: 301 DEVLGEMVMNCRTRMMMMKGWELARAKCHVLKDIDSLIDKDLGKWKKVLELEGVVRTFEF 360

Query: 361 HILDSLLRETTATILSLHKRCRF 381
           HILDSLLRETTATI+SLHKRCRF
Sbjct: 361 HILDSLLRETTATIMSLHKRCRF 374

BLAST of Cp4.1LG05g07050 vs. NCBI nr
Match: KAG7035594.1 (hypothetical protein SDJN02_02391, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 664 bits (1714), Expect = 2.28e-238
Identity = 356/419 (84.96%), Postives = 365/419 (87.11%), Query Frame = 0

Query: 1   MAKQWLFGGTSSPRRAPIDRHRHRHRPSLPSC---------------------------- 60
           MA+QWLFGGTSSPRRAPIDRHRHR  PSLPSC                            
Sbjct: 1   MARQWLFGGTSSPRRAPIDRHRHR--PSLPSCMNTLFHFFDSHSFPSTHLAHNKHQPSSL 60

Query: 61  -------VVAPRNSLEQLGQEQNEQIQMGLEINTNFDHNALDSPSVKTPNLLARLMGLDI 120
                  VVAPRNSLEQLGQEQNEQIQMGLEINTNFDHNALDSPSVKTPNLLARLMGLDI
Sbjct: 61  DHVCSSGVVAPRNSLEQLGQEQNEQIQMGLEINTNFDHNALDSPSVKTPNLLARLMGLDI 120

Query: 121 LPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDKENSQICKEMKQEEEQVR 180
           LPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLD ENSQICKEMKQEEEQVR
Sbjct: 121 LPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDIENSQICKEMKQEEEQVR 180

Query: 181 RKVALVDITNNNNKLVYGKLKNQDMTMSRKHSSISTPTPTLTLTPMPKPKPKAKPREEKE 240
           RKVALVDITNNNNKLVYGKLKNQD+TM RKH+SIST    LT TP PK KP+A  REEKE
Sbjct: 181 RKVALVDITNNNNKLVYGKLKNQDVTMFRKHNSIST----LTPTPTPKRKPRATTREEKE 240

Query: 241 EESPPPAAKVRHEQSFPKQRCRFPKGKQRPAAEEVGRRATADGGAGELKYIKRILSSPNW 300
           EESPPPAAKVRHEQSFPKQRCRFP GKQRPAAEEVGRRATADGGAGELKYIKRIL+SPNW
Sbjct: 241 EESPPPAAKVRHEQSFPKQRCRFPNGKQRPAAEEVGRRATADGGAGELKYIKRILTSPNW 300

Query: 301 FSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD-EVLGEMVKNCRTRMMM-KGWELAR 360
           FSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD EVLGEMV NCRTRMMM KGWELAR
Sbjct: 301 FSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDDDEVLGEMVMNCRTRMMMMKGWELAR 360

Query: 361 AKCHVLEDMDFLIDKDLGKWKKMLELEGVVRIFEFHILDSLLRETTATILSLHKRCRFV 382
           AKCHVLED+D LIDKDLGKWKK+LELEGVVR F+FHILDSLLRETTATI+SLHKRCRFV
Sbjct: 361 AKCHVLEDIDSLIDKDLGKWKKVLELEGVVRTFQFHILDSLLRETTATIMSLHKRCRFV 413

BLAST of Cp4.1LG05g07050 vs. NCBI nr
Match: KAG6605686.1 (hypothetical protein SDJN03_03003, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 643 bits (1659), Expect = 1.24e-230
Identity = 335/384 (87.24%), Postives = 353/384 (91.93%), Query Frame = 0

Query: 1   MAKQWLFGGTSSPRRAPIDRHRHRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60
           MA+QWLFGGTSSPRRAPIDRH+HRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN
Sbjct: 1   MARQWLFGGTSSPRRAPIDRHQHRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60

Query: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRH 120
           FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRH
Sbjct: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRH 120

Query: 121 SLDINLDKENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDMTMSRKHSSIS 180
           SLDINLD ENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQD+TM RKH+SIS
Sbjct: 121 SLDINLDIENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDVTMFRKHNSIS 180

Query: 181 TPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKVRHEQSFPKQRCRFPKGKQRPAAEEV 240
           T TPT T TP  KP+ + + +++K       +  +R     PK RCRFP GKQRPAAEEV
Sbjct: 181 TLTPTPTPTPKRKPRQRLEKKKKK-------SLLLRR----PKSRCRFPNGKQRPAAEEV 240

Query: 241 GRRATADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD 300
           GRR+TADGGAGELKYIKRIL+SPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD
Sbjct: 241 GRRSTADGGAGELKYIKRILTSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD 300

Query: 301 -EVLGEMVKNCRTRMMM-KGWELARAKCHVLEDMDFLIDKDLGKWKKMLELEGVVRIFEF 360
            EVLGEMV NCRTRMMM KGWELARAKCHVLED+D LIDKDLGKWKK+LELEGVVR F+F
Sbjct: 301 DEVLGEMVMNCRTRMMMMKGWELARAKCHVLEDIDSLIDKDLGKWKKVLELEGVVRTFQF 360

Query: 361 HILDSLLRETTATILSLHKRCRFV 382
           HILDSLLRETTATI+SLHKRCRFV
Sbjct: 361 HILDSLLRETTATIMSLHKRCRFV 373

BLAST of Cp4.1LG05g07050 vs. NCBI nr
Match: XP_011656164.1 (uncharacterized protein LOC105435648 [Cucumis sativus] >KGN50399.1 hypothetical protein Csa_000155 [Cucumis sativus])

HSP 1 Score: 152 bits (384), Expect = 1.82e-37
Identity = 166/441 (37.64%), Postives = 213/441 (48.30%), Query Frame = 0

Query: 18  IDRHRHRHRPSLPSC--VVAPRNSLEQ---------LGQEQNEQIQMGLEINT------- 77
           +  H    RP+  S   V APRNSLE            +E+N Q+QMGL+I T       
Sbjct: 67  LSHHHPTLRPTKASHHGVEAPRNSLELDNGDSISCLRNKEENLQLQMGLQIKTRNGSTKS 126

Query: 78  ---------NFDHNALDSPSVKTPNLLARLMGLDILPQTTTSPS--------ATRSLPNS 137
                    N +  AL+SPS  TPNLLARLMGLD  PQTT S S         TRSL  S
Sbjct: 127 KATEQQLPNNDNIIALESPSTNTPNLLARLMGLDNFPQTTFSSSYNHCMPNLGTRSLSES 186

Query: 138 PRVSSSRLSDVDRHHHRHSLDINL-DKENSQI--CKEM-KQEEEQVRR-KVALVDITNNN 197
           PR S SRLSDVD HH R SL IN+ +KEN++I  C+E+ K+E+++V R KVAL+DITN+ 
Sbjct: 187 PRNSLSRLSDVDYHHRRLSLQINIQEKENNKIKICEEISKREKKKVERPKVALIDITNSY 246

Query: 198 NKLVYGKLKNQDMTMSRKHSSISTPTPTLTLT--------------------------PM 257
           NK V  K++    + SRK    S      T T                           M
Sbjct: 247 NK-VRSKIQEIGSSQSRKVEMKSLKKLKKTTTNKSSSSKVVCRSNQKNVIVSNKQKSISM 306

Query: 258 PKPKPKAKPREEKEEESPPPAAKVR---HEQSFPKQRCRFPKGKQRPAAEE---VGRRAT 317
               PK +   E E    P + K+    H   F  Q C +PKGK + A  E   V    T
Sbjct: 307 SMQIPKERRAREGEALDCPRSNKLDLLDHSTIF--QPCSYPKGKAKAAGGETNAVDTATT 366

Query: 318 ADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNK----DDDE 374
            DGG+ E KYIK I  S    S    +  S F+H     +  GE R  RW K        
Sbjct: 367 TDGGSAEFKYIKTIQISSKENSNWVVVPASRFYH-----SVAGEER--RWKKRVELQQAV 426

BLAST of Cp4.1LG05g07050 vs. NCBI nr
Match: KAA0055152.1 (putative dna repair [Cucumis melo var. makuwa] >TYK00310.1 putative dna repair [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (335), Expect = 8.29e-32
Identity = 132/343 (38.48%), Postives = 178/343 (51.90%), Query Frame = 0

Query: 81  MGLDILPQTTTSPSA-------TRSLPNSPRVSSSRLSDVDRHHHRHSLDINL-DKENS- 140
           MGLD  PQT++S          TRSL  SPR SSSRLS+VD HH R SL IN+ +KEN+ 
Sbjct: 1   MGLDNFPQTSSSSYCRCGLNLETRSLTESPRNSSSRLSNVDCHHRRLSLQINIQEKENNG 60

Query: 141 -QICKEM-KQEEEQVRRKVALVDITNNNNKLVY--------------------------- 200
            +IC+++ K+E+++V RKVALVDITN+NNK+ Y                           
Sbjct: 61  IEICEDIIKREKKKVGRKVALVDITNSNNKIGYEIQEIGHSSQSRKVEMKSLKKLEKTTV 120

Query: 201 GKLKNQDMTMSRKHSSISTPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKV--RHEQS 260
           G+  N  +  + + + + +    L   PM   K +     E+E    P   K+   H   
Sbjct: 121 GESSNSKVVHNNQKNEMVSKKQKLISMPMQILKGRTS---EREAFDCPTNNKLLLHHPTI 180

Query: 261 FPKQRCRFPKGKQRPAAEE---VGRRATADGGAGELKYIKRILSSP----NWFSPTNPLN 320
           F  + C +PKGK +PA  E   V    T DG + + KYIK I  S     NW  P     
Sbjct: 181 F--EPCSYPKGKPKPAGGETSAVDITTTTDGESTDFKYIKTIQISSKENSNWVVP----- 240

Query: 321 PSIFHHLETSSAAVGEPRLERWNKDDDEVLGEMVKNCRTRMMMKGWELARAKCHVLEDMD 372
           PS FHHLET+ A  G+ R  RW K  +   G +  + R R   +GWE   AKC ++E   
Sbjct: 241 PSTFHHLETTLA--GKER--RWKKRLELQTGVVGGDRRGRK--RGWEFPHAKCGLVEYG- 300

BLAST of Cp4.1LG05g07050 vs. ExPASy TrEMBL
Match: A0A6J1H2A5 (uncharacterized protein LOC111459727 OS=Cucurbita moschata OX=3662 GN=LOC111459727 PE=4 SV=1)

HSP 1 Score: 669 bits (1726), Expect = 4.01e-241
Identity = 349/383 (91.12%), Postives = 359/383 (93.73%), Query Frame = 0

Query: 1   MAKQWLFGGTSSPRRAPIDRHRHRHRPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60
           MA+QWLFGGTSSPRRAPIDRHRHRH PSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN
Sbjct: 1   MARQWLFGGTSSPRRAPIDRHRHRHHPSLPSCVVAPRNSLEQLGQEQNEQIQMGLEINTN 60

Query: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRH 120
           FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSS RLSDVDRHHHRH
Sbjct: 61  FDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSLRLSDVDRHHHRH 120

Query: 121 SLDINLDKENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDMTMSRKHSSIS 180
           SLDINLD ENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQD+TM RKH+SIS
Sbjct: 121 SLDINLDIENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDVTMFRKHNSIS 180

Query: 181 TPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKVRHEQSFPKQRCRFPKGKQRPAAEEV 240
           T TPT    P PK KP+A  REEKEEESPPPAAKVRHEQ     RCRFP GKQRPAAEEV
Sbjct: 181 TQTPT----PTPKRKPRATTREEKEEESPPPAAKVRHEQ-----RCRFPNGKQRPAAEEV 240

Query: 241 GRRATADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDD 300
           GRRATADGGAGELKYIKRIL+SPNWFSPTNPLNPSIFHHLETS+AAVGEPRLERWNKDDD
Sbjct: 241 GRRATADGGAGELKYIKRILTSPNWFSPTNPLNPSIFHHLETSNAAVGEPRLERWNKDDD 300

Query: 301 -EVLGEMVKNCRTRMMM-KGWELARAKCHVLEDMDFLIDKDLGKWKKMLELEGVVRIFEF 360
            EVLGEMV NCRTRMMM KGWELARAKCHVL+D+D LIDKDLGKWKK+LELEGVVR FEF
Sbjct: 301 DEVLGEMVMNCRTRMMMMKGWELARAKCHVLKDIDSLIDKDLGKWKKVLELEGVVRTFEF 360

Query: 361 HILDSLLRETTATILSLHKRCRF 381
           HILDSLLRETTATI+SLHKRCRF
Sbjct: 361 HILDSLLRETTATIMSLHKRCRF 374

BLAST of Cp4.1LG05g07050 vs. ExPASy TrEMBL
Match: A0A0A0KNC2 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G172790 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 8.81e-38
Identity = 166/441 (37.64%), Postives = 213/441 (48.30%), Query Frame = 0

Query: 18  IDRHRHRHRPSLPSC--VVAPRNSLEQ---------LGQEQNEQIQMGLEINT------- 77
           +  H    RP+  S   V APRNSLE            +E+N Q+QMGL+I T       
Sbjct: 67  LSHHHPTLRPTKASHHGVEAPRNSLELDNGDSISCLRNKEENLQLQMGLQIKTRNGSTKS 126

Query: 78  ---------NFDHNALDSPSVKTPNLLARLMGLDILPQTTTSPS--------ATRSLPNS 137
                    N +  AL+SPS  TPNLLARLMGLD  PQTT S S         TRSL  S
Sbjct: 127 KATEQQLPNNDNIIALESPSTNTPNLLARLMGLDNFPQTTFSSSYNHCMPNLGTRSLSES 186

Query: 138 PRVSSSRLSDVDRHHHRHSLDINL-DKENSQI--CKEM-KQEEEQVRR-KVALVDITNNN 197
           PR S SRLSDVD HH R SL IN+ +KEN++I  C+E+ K+E+++V R KVAL+DITN+ 
Sbjct: 187 PRNSLSRLSDVDYHHRRLSLQINIQEKENNKIKICEEISKREKKKVERPKVALIDITNSY 246

Query: 198 NKLVYGKLKNQDMTMSRKHSSISTPTPTLTLT--------------------------PM 257
           NK V  K++    + SRK    S      T T                           M
Sbjct: 247 NK-VRSKIQEIGSSQSRKVEMKSLKKLKKTTTNKSSSSKVVCRSNQKNVIVSNKQKSISM 306

Query: 258 PKPKPKAKPREEKEEESPPPAAKVR---HEQSFPKQRCRFPKGKQRPAAEE---VGRRAT 317
               PK +   E E    P + K+    H   F  Q C +PKGK + A  E   V    T
Sbjct: 307 SMQIPKERRAREGEALDCPRSNKLDLLDHSTIF--QPCSYPKGKAKAAGGETNAVDTATT 366

Query: 318 ADGGAGELKYIKRILSSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNK----DDDE 374
            DGG+ E KYIK I  S    S    +  S F+H     +  GE R  RW K        
Sbjct: 367 TDGGSAEFKYIKTIQISSKENSNWVVVPASRFYH-----SVAGEER--RWKKRVELQQAV 426

BLAST of Cp4.1LG05g07050 vs. ExPASy TrEMBL
Match: A0A5D3BMU7 (Putative dna repair OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00570 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 4.01e-32
Identity = 132/343 (38.48%), Postives = 178/343 (51.90%), Query Frame = 0

Query: 81  MGLDILPQTTTSPSA-------TRSLPNSPRVSSSRLSDVDRHHHRHSLDINL-DKENS- 140
           MGLD  PQT++S          TRSL  SPR SSSRLS+VD HH R SL IN+ +KEN+ 
Sbjct: 1   MGLDNFPQTSSSSYCRCGLNLETRSLTESPRNSSSRLSNVDCHHRRLSLQINIQEKENNG 60

Query: 141 -QICKEM-KQEEEQVRRKVALVDITNNNNKLVY--------------------------- 200
            +IC+++ K+E+++V RKVALVDITN+NNK+ Y                           
Sbjct: 61  IEICEDIIKREKKKVGRKVALVDITNSNNKIGYEIQEIGHSSQSRKVEMKSLKKLEKTTV 120

Query: 201 GKLKNQDMTMSRKHSSISTPTPTLTLTPMPKPKPKAKPREEKEEESPPPAAKV--RHEQS 260
           G+  N  +  + + + + +    L   PM   K +     E+E    P   K+   H   
Sbjct: 121 GESSNSKVVHNNQKNEMVSKKQKLISMPMQILKGRTS---EREAFDCPTNNKLLLHHPTI 180

Query: 261 FPKQRCRFPKGKQRPAAEE---VGRRATADGGAGELKYIKRILSSP----NWFSPTNPLN 320
           F  + C +PKGK +PA  E   V    T DG + + KYIK I  S     NW  P     
Sbjct: 181 F--EPCSYPKGKPKPAGGETSAVDITTTTDGESTDFKYIKTIQISSKENSNWVVP----- 240

Query: 321 PSIFHHLETSSAAVGEPRLERWNKDDDEVLGEMVKNCRTRMMMKGWELARAKCHVLEDMD 372
           PS FHHLET+ A  G+ R  RW K  +   G +  + R R   +GWE   AKC ++E   
Sbjct: 241 PSTFHHLETTLA--GKER--RWKKRLELQTGVVGGDRRGRK--RGWEFPHAKCGLVEYG- 300

BLAST of Cp4.1LG05g07050 vs. ExPASy TrEMBL
Match: A0A6A3A4M5 (AGAMOUS-like 20 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110602pilonHSYRG00338 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 1.01e-19
Identity = 153/505 (30.30%), Postives = 205/505 (40.59%), Query Frame = 0

Query: 35  APRNSLEQLGQEQNEQIQMGLEINTNF---DHNALDSPSVKTPNLLARLMGLDILPQTTT 94
           APRNSLE   +++   + MG++I T       N +D+P  KTP L+ARLMGLD++P+T  
Sbjct: 62  APRNSLESEEEDEILNVPMGIQIKTKVVATADNDIDTPGTKTPTLVARLMGLDLIPETR- 121

Query: 95  SPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDKENSQICKEM-------------- 154
           S   TRSLP +PR SS R SDVDRHH R SL IN  KEN    +E+              
Sbjct: 122 SLDGTRSLPVTPRTSSVRRSDVDRHHRRLSLQIN--KENMSATQELIMSRLSSLMKRKEK 181

Query: 155 -----KQEEEQVRRKVALVDITN---NNNKLV----YGKL----KNQDMTMSRKHSSI-- 214
                KQ +E+V RKV + +ITN   N  +LV    Y K+    K  D +   KHS+   
Sbjct: 182 KHEYVKQVKERVARKVGM-NITNEVRNREELVSHFKYKKISALTKVADDSTIVKHSTNPK 241

Query: 215 -STP-----TPTLTLTPMPKPKPKAKP------------------------------REE 274
            STP     T T  L P+ + + + KP                              R +
Sbjct: 242 PSTPRIQKQTSTRKLQPLEEQQYEQKPIAASKSKKGSNKKLVSRLKKPQQSLEIIRSRNK 301

Query: 275 KEE-----------------------------------------ESPPPAAKVRHEQSFP 334
           KEE                                         +  PP+  +  +Q+  
Sbjct: 302 KEEPFVRAPKASRVNIPDKKCRKIPLSDDLLNSIKIPTLILVKKDPSPPSTNIPQKQAL- 361

Query: 335 KQRCRFPKGKQRPAAEEVGR--RATADGGAG--------ELKYIKRIL-----------S 365
               R P  KQ P  E V R   AT    A         E  YI RIL           S
Sbjct: 362 --HARRPYIKQEPRQEHVSRCNNATITTAAAISTAVGKEEHDYITRILRRTGLDKDTRVS 421

BLAST of Cp4.1LG05g07050 vs. ExPASy TrEMBL
Match: A0A6A3C4U4 (AGAMOUS-like 20 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00011079pilonHSYRG00202 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.00e-19
Identity = 144/501 (28.74%), Postives = 197/501 (39.32%), Query Frame = 0

Query: 35  APRNSLEQLGQEQNEQIQMGLEINTNF--DHNALDSPSVKTPNLLARLMGLDILPQTTTS 94
           APRNSLE   +++   I MG++I T     +N +D+P  KTP L+ARLMGLD+LP+T   
Sbjct: 73  APRNSLESEEEDEILNIPMGIQIKTKVGESNNDIDTPGTKTPTLVARLMGLDLLPETR-- 132

Query: 95  PSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDKENSQICKEM--------------- 154
              TRSLP +PR SS R SDV   HHRHSL IN  KEN    +E+               
Sbjct: 133 -GGTRSLPVTPRTSSVRWSDV---HHRHSLQIN--KENMSATQELIMSRLSSLMKRKELK 192

Query: 155 ----KQEEEQVRRKVALVDITNNNN---KLVYGKLKNQDMTMSRKHSSISTPTPTLTLTP 214
               KQ +E V RKV   +ITN ++    L+  K K+ +    +   S  + +P +    
Sbjct: 193 HEYVKQIKESVSRKVG-TNITNAHSTHPSLLASKSKSTNYYNPQHRKSSFSSSPRIQKQT 252

Query: 215 MPKPKPKAKPREEKEEESPPPAA-------------------------KVRHEQSF---- 274
             K KP     EE++E+  P AA                         + + E+ F    
Sbjct: 253 SHKLKPV---EEEQDEQQKPRAASKSKKGSNKKFVSRLKKPQQALEIIRNKKEEPFVRPR 312

Query: 275 -------PKQRCRF--------------------------------------PKG----- 334
                  P ++CR                                       PK      
Sbjct: 313 SANRVNIPDKKCRKIPLSNDLLNSKVPTLLVKKDPSPPATNIPQIQVLHARRPKHSSSSS 372

Query: 335 -----KQRPAAEEVGRRATAD----------GGAGELKYIKRIL-----------SSPNW 367
                KQ P    V R   A           GG  E +YI+RIL           S  +W
Sbjct: 373 IQTYIKQEPGQAHVSRCNNATITTTATVSTAGGKAEHEYIRRILRRTGLDKDTRVSISSW 432

BLAST of Cp4.1LG05g07050 vs. TAIR 10
Match: AT4G25430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-08
Identity = 107/394 (27.16%), Postives = 167/394 (42.39%), Query Frame = 0

Query: 20  RHRHRHRPSLPS------CVVAPRNSL---EQLGQEQNEQIQM-GLEINTNFDHNAL--- 79
           RH H H+PS+ S       +VAPRNSL   E+     N +++  GL I+     + L   
Sbjct: 45  RHHHHHQPSIDSPSRTRKGLVAPRNSLDLSEESPLSTNYKLEREGLNISVGGKKSTLRGL 104

Query: 80  --DSPS-------VKTPNLLARLMGLDILP---QTTTSP-------------SATRSLPN 139
             D+PS        KTPN++ARLMGLD+LP   + T SP             S TRSLP 
Sbjct: 105 LVDTPSHNCNLPRTKTPNVVARLMGLDLLPDNLELTRSPRNGVRGHRLSGNGSGTRSLPA 164

Query: 140 SPRVSSSRLSDVDRHHHRHSLDINLDKENSQ-----ICKEMKQEEEQVRRKVALVDITNN 199
           SPR+SS      D  +HR SL++N +    +       KE+KQ+E+    + +   I   
Sbjct: 165 SPRISS------DSENHRLSLELNRENNKHEEFVRTRLKELKQDEQSPSPRYSGRQIVKQ 224

Query: 200 NNKLVYGKLKNQDMT---------------MSRKHSSIST-----------PTPTLTLT- 259
             K V  +    D+T               +S+K  + ST           P   +TL+ 
Sbjct: 225 TKKRVTTRKFGMDVTNLLEKKRAGGAAQNRISQKEKTTSTNPAFVLRQYQQPATVITLSK 284

Query: 260 ---PMPKPKPKAKPREEKEEESPPPAAKVRHEQS-----------------FPKQRCR-- 307
                 +P    +  E K + SP P    R++Q                    K++C+  
Sbjct: 285 ENQQSLRPISGWEKAESKSKFSPHPTPNNRNKQRKVLTPVSTHSRSNRCDLLEKKQCKKI 344

BLAST of Cp4.1LG05g07050 vs. TAIR 10
Match: AT5G62170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 6.7e-08
Identity = 141/602 (23.42%), Postives = 205/602 (34.05%), Query Frame = 0

Query: 21  HRHRHRPSLPSCVVAPRNSLEQLGQEQ---------NEQIQMGLEINT---------NFD 80
           H H H   LP  V APRNSLE   +E          N  I MG++I T         +  
Sbjct: 63  HHHLH---LPKGVDAPRNSLESTEEETSFSPTRKDGNLNISMGIKIKTKPQARSSSASLT 122

Query: 81  HNALDSPSVKTPNLLARLMGLDILP---QTTTSPSA------------------------ 140
                SPS+KTP L+ARLMGLD++P   +++ +PS+                        
Sbjct: 123 PTETYSPSIKTPTLVARLMGLDLVPDNYRSSPTPSSSSSSTLIDLKTPTRSSHAKKHRHY 182

Query: 141 ----------TRSLPNSPRVSSSRLS-DVDRHHHRHS----------------------- 200
                     TRSLP +PR+S  R S DV+ + H+ S                       
Sbjct: 183 SLQRNSVDGGTRSLPETPRISLGRRSVDVNCYEHQRSSLHLRDNNINVFPERESGINNVR 242

Query: 201 ----LDINLDKEN-------SQICKEMKQEEEQVRRKVALVDITNNNN--KLVYGKLKNQ 260
                +I+ DKEN        QI  ++K  E   RR+    DITN     + V+   K  
Sbjct: 243 LTRVKEIHEDKENRSPREYARQIVMQLK--ENVSRRRRMGTDITNKETQPREVHESKKAS 302

Query: 261 DMTMSRKHSSISTPTPTLTLTPMPKPKPKA-----------------------------K 320
             T    H   S  +P L LT +PK KP +                             +
Sbjct: 303 SKTTIITHDVSS--SPRLGLTEVPKTKPTSLQTNNVASKILETTAMKVQDKTRLPTVHEE 362

Query: 321 PREEKEEESPPPAAKVRHEQSFPKQRCRFPKGKQR------------------------- 375
           P+  ++E+      K +  ++F  +  + P+  Q                          
Sbjct: 363 PQGTEKEKQRKSTKKCKKPENFKSRLVKPPQSMQEEPFVRSPAINNSNNNNNGHLLLIQG 422

BLAST of Cp4.1LG05g07050 vs. TAIR 10
Match: AT5G51850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits to 375 proteins in 79 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 58/184 (31.52%), Postives = 85/184 (46.20%), Query Frame = 0

Query: 67  DSPSVKTPNLLARLMGLDILPQTT---------------------TSPSATRSLPNSPRV 126
           +SP  KTPNL+ARLMGLD+LP  T                      S   TRSLP SPR+
Sbjct: 113 NSPGSKTPNLVARLMGLDLLPDKTDLNHSLSDLHTMSSHHITSHRLSKKGTRSLPVSPRI 172

Query: 127 SSSRLSDVDRHHHRHSLDINLDKENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKL 186
           SS+R SD D   HR SL +N +KE  +   +  QEE    R  A   +     ++V  ++
Sbjct: 173 SSARKSDFD--IHRLSLQLNREKEFGRSRLKEDQEESHSPRDYARQIVKQIKERVVTRRV 232

Query: 187 KNQDMTMSRKHSSISTPTPTL----TLTPMPKPKPKAKPREEKEEESPPPAAKVRHEQSF 226
              D+T S K+   + P+  L    T++  P+ +   K  ++     P  ++  R E   
Sbjct: 233 VGMDITNSVKNRE-ARPSHELRRDTTVSCSPRTRFSEKENKQSTSHKPNSSSSSRPEPII 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022958521.18.29e-24191.12uncharacterized protein LOC111459727 [Cucurbita moschata][more]
KAG7035594.12.28e-23884.96hypothetical protein SDJN02_02391, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6605686.11.24e-23087.24hypothetical protein SDJN03_03003, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011656164.11.82e-3737.64uncharacterized protein LOC105435648 [Cucumis sativus] >KGN50399.1 hypothetical ... [more]
KAA0055152.18.29e-3238.48putative dna repair [Cucumis melo var. makuwa] >TYK00310.1 putative dna repair [... [more]
Match NameE-valueIdentityDescription
A0A6J1H2A54.01e-24191.12uncharacterized protein LOC111459727 OS=Cucurbita moschata OX=3662 GN=LOC1114597... [more]
A0A0A0KNC28.81e-3837.64VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G172790 PE=... [more]
A0A5D3BMU74.01e-3238.48Putative dna repair OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728... [more]
A0A6A3A4M51.01e-1930.30AGAMOUS-like 20 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110602pilonHSYRG003... [more]
A0A6A3C4U46.00e-1928.74AGAMOUS-like 20 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00011079pilonHSYRG002... [more]
Match NameE-valueIdentityDescription
AT4G25430.11.0e-0827.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G62170.16.7e-0823.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G51850.12.8e-0631.52unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032795DUF3741-associated sequence motifPFAMPF14383VARLMGLcoord: 67..90
e-value: 9.5E-9
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR37751LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEINcoord: 95..147
coord: 22..95
coord: 152..374

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g07050.1Cp4.1LG05g07050.1mRNA