Cp4.1LG05g04810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g04810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	Cp4.1LG05: 2895962 .. 2897393 (+)
RNA-Seq Expression	Cp4.1LG05g04810
Synteny	Cp4.1LG05g04810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGCCGTTGGATCCAATGTGGGCGTTGGAAGAGATGAGTTCGATCAGATCGTTCGTTTCCAGAGAAGAAGCGGGTTATCGGTGGCAAGGATTTGTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCTATCATTTCTAAGCTTCTTTCGCCTTCGGACAATGCCTTCTTATCTGCTATTCAGAAGGACTGGTAAGTTTTTCTGTTGATTTTGGAGAATTCCTTTATTTGTGATGTGGAAACCTGGAATTTGGAAGGATTTGAAATGATTTTCGGTGTTTAGTTAGAAAAAACAGGATTTGAAATTCAATCTTAATCTCATTTTAATTGGTTGAATTGAAGAAATCAAATTGAACAAAACTTGATCTGCGAGAACGCGATTGAGAGATGAAGGATTGTGGAAGATTGAGAGGTAGATAGGAACGAGTATAAATGGTAGGGAGAAGAAAGAAAAAGGTGGGGGATGGTAGTGGATGAAGAACGGATACGTTTTTTAGGTCATTCATATGATGTTATCCATATTAGGAAATGAGTATGTACGAATCTGAATGTTAGCATGCCTTTGAAGCAAGCCAATTACTTGTTCTAAGAGCATTTTAATGAAATTTGATTTGGTGATAGTGGCTTTGATCTCTTGAGAAGATTGCTTAAATCAAAACTATCACAATTTCAAGGGAACTAATATGATAACAATGAGACCTCTATTTGTAATGTATTTCCTGTTTTTTACTAGGTATTACTGTGTCCTGGTGCCCTTGACATTACCTATCCTTTATGCTGCCGTTTATTTCCATTGGCTCAGCATGAAACTATTCAAGCATGCTTGAAGGTGGTCAGCTAATGAACTATCCAACCAAGTTGAGTGTCTCAATCATCTTATATGTTTGATTAAATTACAATGTGATGTGTTCCGAGTTTCCGTAGCCGAGGTGATCGAGGATGTACTGGTATTCTACCGGAGTCTATATATCGTGCAAGCAAATTCGATATCGGCCAGTCATGTCATAGAAAAATCCGTTCATTTTGGTTGAATGATGAGAACATGAGATATTCAAACTAAGCTGAAAGGCCAAAGAGTGATTTAAACTCAACATTGAATGACTTGGTGAATGCATCTAAGCACAAGCTTTATGACCTAAGGTGAGCATCTCCAAAGACAATCTAGGGAAGACCAACTTGGGTTGTGGTTGGCGAGGAGATACTTGATTCTTGAAAATTGCTTCATTGTTGGACATGCCACTTTTGGTAATGCTTTGATATATATACCAAAATTTGTCCATTTTGTTATCAAATGTGCTCGAATCTAGAGCTCTACCTATACACTTATCACTTATGGTGACCGATTTTTTTGAAAAATGTAGTTGATCTATTTTTAAAATTGTATGAACGAACTAATGAAGCTATGATAACAAGTGTC

mRNA sequence

TCCGCCGTTGGATCCAATGTGGGCGTTGGAAGAGATGAGTTCGATCAGATCGTTCGTTTCCAGAGAAGAAGCGGGTTATCGGTGGCAAGGATTTGTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCTATCATTTCTAAGCTTCTTTCGCCTTCGGACAATGCCTTCTTATCTGCTATTCAGAAGGACTGGTATTACTGTGTCCTGGTGCCCTTGACATTACCTATCCTTTATGCTGCCGTTTATTTCCATTGGCTCAGCATGAAACTATTCAAGCATGCTTGAAGGTGGTCAGCTAATGAACTATCCAACCAAGTTGAGTGTCTCAATCATCTTATATGTTTGATTAAATTACAATGTGATGTGTTCCGAGTTTCCGTAGCCGAGGTGATCGAGGATGTACTGGTATTCTACCGGAGTCTATATATCGTGCAAGCAAATTCGATATCGGCCAGTCATGTCATAGAAAAATCCGTTCATTTTGGTTGAATGATGAGAACATGAGATATTCAAACTAAGCTGAAAGGCCAAAGAGTGATTTAAACTCAACATTGAATGACTTGGTGAATGCATCTAAGCACAAGCTTTATGACCTAAGGTGAGCATCTCCAAAGACAATCTAGGGAAGACCAACTTGGGTTGTGGTTGGCGAGGAGATACTTGATTCTTGAAAATTGCTTCATTGTTGGACATGCCACTTTTGGTAATGCTTTGATATATATACCAAAATTTGTCCATTTTGTTATCAAATGTGCTCGAATCTAGAGCTCTACCTATACACTTATCACTTATGGTGACCGATTTTTTTGAAAAATGTAGTTGATCTATTTTTAAAATTGTATGAACGAACTAATGAAGCTATGATAACAAGTGTC

Coding sequence (CDS)

ATGTGGGCGTTGGAAGAGATGAGTTCGATCAGATCGTTCGTTTCCAGAGAAGAAGCGGGTTATCGGTGGCAAGGATTTGTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCTATCATTTCTAAGCTTCTTTCGCCTTCGGACAATGCCTTCTTATCTGCTATTCAGAAGGACTGGTATTACTGTGTCCTGGTGCCCTTGACATTACCTATCCTTTATGCTGCCGTTTATTTCCATTGGCTCAGCATGAAACTATTCAAGCATGCTTGA

Protein sequence

MWALEEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYYCVLVPLTLPILYAAVYFHWLSMKLFKHA

Homology

[Close]

BLAST of Cp4.1LG05g04810 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183 bits (464), Expect = 4.80e-58
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MWALEEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAI 60
          MWALEEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAI
Sbjct: 1  MWALEEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAI 60

Query: 61 QKDWYYCVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          QKDWYYC+LVPLTLPILYAAVYFHWLSMKLFKHA
Sbjct: 61 QKDWYYCLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of Cp4.1LG05g04810 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 136 bits (342), Expect = 1.63e-39
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66
          MSSIRS + REEA  R QGF F+V+SF  LL+FLYAA+ISKLL PS+NAFLSAIQ DWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 67 CVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          C+LVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Cp4.1LG05g04810 vs. NCBI nr
Match: XP_040987410.1 (uncharacterized protein LOC121235195 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 104 bits (259), Expect = 1.02e-26
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 8   SSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYYC 67
           SS  S ++  +  + W G++F+ + FVF + FL+AA++SKLLS S+NA +SAIQ DW+YC
Sbjct: 15  SSTSSQLTSSKDEFFW-GYLFVAIGFVFFVNFLFAAVVSKLLSSSNNALISAIQNDWFYC 74

Query: 68  VLVPLTLPILYAAVYFHWLSMKLFKHA 94
            LVPLTLP+L  AVYFHWLSMKLFKHA
Sbjct: 75  FLVPLTLPVLVVAVYFHWLSMKLFKHA 100

[Close]

BLAST of Cp4.1LG05g04810 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 103 bits (256), Expect = 1.96e-26
Identity = 56/89 (62.92%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 7  MSSIRSFV-SREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWY 66
          M ++R FV S     + W   +F   SFVF   FLYAA++SKLL PSDN+ + AIQ DWY
Sbjct: 1  MLALREFVDSNGRIFWGWFFLIFGSFSFVF---FLYAAVVSKLLPPSDNSVIQAIQNDWY 60

Query: 67 YCVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          YC LVPLTLPIL+ AVYFHWLSMKLFKHA
Sbjct: 61 YCFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Cp4.1LG05g04810 vs. NCBI nr
Match: PIN13861.1 (hypothetical protein CDL12_13514 [Handroanthus impetiginosus])

HSP 1 Score: 101 bits (252), Expect = 8.93e-26
Identity = 57/90 (63.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 5  EEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDW 64
          E+M S+R F+      + W  F  I+ SF FL  FLYAA+ISKL  PSDN  + AIQ DW
Sbjct: 3  EKMLSLRDFLVSNGKVF-WGWFFIIIGSFSFLT-FLYAAVISKLQPPSDNVVIRAIQNDW 62

Query: 65 YYCVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          YYC LVPLTLPIL  AVYFHWLSMKLFKHA
Sbjct: 63 YYCFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 7.90e-40
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66
          MSSIRS + REEA  R QGF F+V+SF  LL+FLYAA+ISKLL PS+NAFLSAIQ DWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 67 CVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          C+LVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 4.57e-39
Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66
          MSSIRS + REE   R QG +F+VVSF+FLL+FLYAA ISKLL PS+NAFLSAIQ DW+Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 67 CVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          C+LVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 9.50e-27
Identity = 56/89 (62.92%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 7  MSSIRSFV-SREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWY 66
          M ++R FV S     + W   +F   SFVF   FLYAA++SKLL PSDN+ + AIQ DWY
Sbjct: 1  MLALREFVDSNGRIFWGWFFLIFGSFSFVF---FLYAAVVSKLLPPSDNSVIQAIQNDWY 60

Query: 67 YCVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          YC LVPLTLPIL+ AVYFHWLSMKLFKHA
Sbjct: 61 YCFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL
Match: A0A2G9H8L1 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 PE=4 SV=1)

HSP 1 Score: 101 bits (252), Expect = 4.32e-26
Identity = 57/90 (63.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 5  EEMSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDW 64
          E+M S+R F+      + W  F  I+ SF FL  FLYAA+ISKL  PSDN  + AIQ DW
Sbjct: 3  EKMLSLRDFLVSNGKVF-WGWFFIIIGSFSFLT-FLYAAVISKLQPPSDNVVIRAIQNDW 62

Query: 65 YYCVLVPLTLPILYAAVYFHWLSMKLFKHA 94
          YYC LVPLTLPIL  AVYFHWLSMKLFKHA
Sbjct: 63 YYCFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL
Match: A0A7N0RIH6 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 8.01e-26
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 25 GFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYYCVLVPLTLPILYAAVYFH 84
          G + +    +FLL F+YAAIISKLL PSDN  +SAIQ DWYYC LVPLTLPIL  AVYFH
Sbjct: 18 GLILVGFGILFLLGFIYAAIISKLLPPSDNVIISAIQNDWYYCFLVPLTLPILVVAVYFH 77

Query: 85 WLSMKLFKHA 94
          WLSMKLFKHA
Sbjct: 78 WLSMKLFKHA 87

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g04810 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g04810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605922.1	4.80e-58	98.94	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ADN33919.1	1.63e-39	79.55	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_040987410.1	1.02e-26	59.77	uncharacterized protein LOC121235195 [Juglans microcarpa x Juglans regia]	[more]
EYU17719.1	1.96e-26	62.92	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
PIN13861.1	8.93e-26	63.33	hypothetical protein CDL12_13514 [Handroanthus impetiginosus]	[more]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBS7	7.90e-40	79.55	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KIB0	4.57e-39	78.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
A0A022PQH2	9.50e-27	62.92	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]
A0A2G9H8L1	4.32e-26	63.33	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 P...	[more]
A0A7N0RIH6	8.01e-26	72.86	Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g04810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 25..93 e-value: 4.5E-16 score: 59.5
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 19..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g04810.1	Cp4.1LG05g04810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0016740	transferase activity