Cp4.1LG05g00220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g00220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	homeobox-leucine zipper protein HDG5-like
Location	Cp4.1LG05: 872077 .. 872761 (-)
RNA-Seq Expression	Cp4.1LG05g00220
Synteny	Cp4.1LG05g00220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAGCTGGAGGTTCTTTCCAATGGGAATTCACTGCACGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGCATATCTCTGCTTCGTATCAATGTGAGTTTTTCATGTAAATTCAAAAAAATTTAGGCTAAACTTTTGAAGTTATTTTCAATATTCAGCCAATTTTGTTTGATGGGAGCTACATAAATATTTTCAGGTGGCCAGCAATTTCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTTCGCTACCATCGACGTCGATTCAATTCAGTTAGCCATGAGCGGAGAAGACTCCTCCAGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTTGTCGATTCGACTGCCGATGGACGCCTAGCATCATCGCCACCCAAGGACGGTGCTACTAATGCTGCAGTTGTCAACTCCGGCTGCTTACTTACCGTCGGCCTGCAAGTTCTAGCCAGCACCATTCCATCGGCGAAGCTCAACTTGTCTAGTGTAACCGCCATCAACAACCAGCTCTGTAACACGCTCCACCAAATTAACGCTGCTCTTGGCTGCAGCTCAACTCAGCTCGAGAATGCCAATGCCACTGTCGACCAGAATACTGCACTGCCGCTGCCGACACAACCGCCACCCAAGCAATAA

mRNA sequence

ATGCTTCAGCTGGAGGTTCTTTCCAATGGGAATTCACTGCACGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGCATATCTCTGCTTCGTATCAATGTGGCCAGCAATTTCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTTCGCTACCATCGACGTCGATTCAATTCAGTTAGCCATGAGCGGAGAAGACTCCTCCAGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTTGTCGATTCGACTGCCGATGGACGCCTAGCATCATCGCCACCCAAGGACGGTGCTACTAATGCTGCAGTTGTCAACTCCGGCTGCTTACTTACCGTCGGCCTGCAAGTTCTAGCCAGCACCATTCCATCGGCGAAGCTCAACTTGTCTAGTGTAACCGCCATCAACAACCAGCTCTGTAACACGCTCCACCAAATTAACGCTGCTCTTGGCTGCAGCTCAACTCAGCTCGAGAATGCCAATGCCACTGTCGACCAGAATACTGCACTGCCGCTGCCGACACAACCGCCACCCAAGCAATAA

Coding sequence (CDS)

ATGCTTCAGCTGGAGGTTCTTTCCAATGGGAATTCACTGCACGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGCATATCTCTGCTTCGTATCAATGTGGCCAGCAATTTCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTTCGCTACCATCGACGTCGATTCAATTCAGTTAGCCATGAGCGGAGAAGACTCCTCCAGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTTGTCGATTCGACTGCCGATGGACGCCTAGCATCATCGCCACCCAAGGACGGTGCTACTAATGCTGCAGTTGTCAACTCCGGCTGCTTACTTACCGTCGGCCTGCAAGTTCTAGCCAGCACCATTCCATCGGCGAAGCTCAACTTGTCTAGTGTAACCGCCATCAACAACCAGCTCTGTAACACGCTCCACCAAATTAACGCTGCTCTTGGCTGCAGCTCAACTCAGCTCGAGAATGCCAATGCCACTGTCGACCAGAATACTGCACTGCCGCTGCCGACACAACCGCCACCCAAGCAATAA

Protein sequence

MLQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTALPLPTQPPPKQ

Homology

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot
Match: Q336P2 (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC3 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.8e-49
Identity = 111/188 (59.04%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCT-DQSGSLVV 62
           QLE+LSNG SLHEVAHIANGSHP NCISLLRIN ASN SQ+VEL+LQES T    GSLVV
Sbjct: 684 QLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVV 743

Query: 63  FATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVD-----------------STADGRLA 122
           FAT+DVD+IQ+ MSGED S IPLLP+GF+I P                       +G  +
Sbjct: 744 FATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETS 803

Query: 123 SSPPKDGATN-----AAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQI 168
           S+PP++ ++N       +  +GCLLTVG+QVLAS +PSAKLNLSSVTAIN+ +CN +HQI
Sbjct: 804 STPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQI 863

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot
Match: A2ZAI7 (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica OX=39946 GN=ROC3 PE=3 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-49
Identity = 110/184 (59.78%), Postives = 132/184 (71.74%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCT-DQSGSLVV 62
           QLE+LSNG SLHEVAHIANGSHP NCISLLRIN ASN SQ+VEL+LQES T    GSLVV
Sbjct: 684 QLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVV 743

Query: 63  FATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVD-----------------STADGRLA 122
           FAT+DVD+IQ+ MSGED S IPLLP+GF+I P                       +G  +
Sbjct: 744 FATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETS 803

Query: 123 SSPPKDGATN-----AAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQI 164
           S+PP++ ++N       +  +GCLLTVG+QVLAS +PSAKLNLSSVTAIN+ +CN +HQI
Sbjct: 804 STPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQI 863

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot
Match: Q9FJS2 (Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana OX=3702 GN=HDG5 PE=2 SV=3)

HSP 1 Score: 194.9 bits (494), Expect = 8.4e-49
Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 4   LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFA 63
           LEVL NGNS HEVAHIANGSHPGNCISLLRINVASN   +VELMLQESC D SGSL+V++
Sbjct: 659 LEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYS 718

Query: 64  TIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCL 123
           T+DVDSIQ AM+GEDSS+IP+LP+GFSIVPV           +PP+  + N+    S CL
Sbjct: 719 TVDVDSIQQAMNGEDSSNIPILPLGFSIVPV-----------NPPEGISVNSHSPPS-CL 778

Query: 124 LTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATV 178
           LTVG+QVLAS +P+AK NLS+VT INN LC T++QI +AL  + T +  ++A V
Sbjct: 779 LTVGIQVLASNVPTAKPNLSTVTTINNHLCATVNQITSALSNTITPVIASSADV 820

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot
Match: Q8L7H4 (Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana OX=3702 GN=HDG4 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-40
Identity = 89/161 (55.28%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLE+L  G+S  EVAHIANGSH GN ISLLRINV SN S +VELMLQE+CTD SGSL+V+
Sbjct: 555 QLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVY 614

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           +T+D  ++QLAM+GED S IPLLP+GFS+VPV             P DG   ++V +  C
Sbjct: 615 STVDPVAVQLAMNGEDPSEIPLLPVGFSVVPV------------NPSDGVEGSSVSSPSC 674

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAAL 164
           LLTV +QVL S + + +L+LS+V+ IN+++C T+++I +AL
Sbjct: 675 LLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSAL 703

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot
Match: Q69T58 (Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC8 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 4.2e-32
Identity = 83/169 (49.11%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           Q +VLS+GN + EV+ I NGS+PGNCISLLR     N SQ+  L+LQESCTD SGSLVV+
Sbjct: 540 QWDVLSHGNQVQEVSRIPNGSNPGNCISLLR---GLNASQNSMLILQESCTDASGSLVVY 599

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVP--VVDSTADGRLASSPPKDGAT--NAAVV 122
           + ID+ +  + MSGED SSIPLLP GF+I+P     S A    +S+ P   A        
Sbjct: 600 SPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGRPGSAAGASTSSAGPLAAARGGGGGGA 659

Query: 123 NSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSS 168
             G ++TV  Q+L S++PS+KLN  SV  +N  +  T+ QI AAL CS+
Sbjct: 660 GGGSVVTVAFQILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSA 705

[Close]

BLAST of Cp4.1LG05g00220 vs. NCBI nr
Match: XP_023532954.1 (homeobox-leucine zipper protein HDG5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (940), Expect = 7.11e-127
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 4   LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFA 63
           LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFA
Sbjct: 40  LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFA 99

Query: 64  TIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCL 123
           TIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCL
Sbjct: 100 TIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCL 159

Query: 124 LTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTAL 183
           LTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTAL
Sbjct: 160 LTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTAL 219

Query: 184 PLPTQPPPKQ 193
           PLPTQPPPKQ
Sbjct: 220 PLPTQPPPKQ 229

[Close]

BLAST of Cp4.1LG05g00220 vs. NCBI nr
Match: KAG6606269.1 (Homeobox-leucine zipper protein ROC3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361 bits (927), Expect = 8.14e-122
Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           +LEV SNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 248 RLEVTSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 307

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 308 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 367

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANA V+QNTA
Sbjct: 368 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANAAVEQNTA 427

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 428 LPLPTQPPPKQ 438

[Close]

BLAST of Cp4.1LG05g00220 vs. NCBI nr
Match: XP_023534245.1 (homeobox-leucine zipper protein HDG5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368 bits (945), Expect = 5.63e-120
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 620 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 679

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 680 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 739

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA
Sbjct: 740 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 799

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 800 LPLPTQPPPKQ 810

[Close]

BLAST of Cp4.1LG05g00220 vs. NCBI nr
Match: XP_022931244.1 (homeobox-leucine zipper protein HDG5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 366 bits (940), Expect = 3.14e-119
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 620 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 679

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 680 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 739

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANA VDQNTA
Sbjct: 740 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANAAVDQNTA 799

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 800 LPLPTQPPPKQ 810

[Close]

BLAST of Cp4.1LG05g00220 vs. NCBI nr
Match: XP_022931242.1 (homeobox-leucine zipper protein HDG5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 366 bits (940), Expect = 3.14e-119
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 620 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 679

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 680 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 739

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANA VDQNTA
Sbjct: 740 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANAAVDQNTA 799

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 800 LPLPTQPPPKQ 810

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL
Match: A0A6J1ETS6 (homeobox-leucine zipper protein HDG5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437478 PE=3 SV=1)

HSP 1 Score: 366 bits (940), Expect = 1.52e-119
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 620 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 679

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 680 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 739

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANA VDQNTA
Sbjct: 740 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANAAVDQNTA 799

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 800 LPLPTQPPPKQ 810

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL
Match: A0A6J1ET32 (homeobox-leucine zipper protein HDG5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437478 PE=3 SV=1)

HSP 1 Score: 366 bits (940), Expect = 1.52e-119
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 620 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 679

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC
Sbjct: 680 ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 739

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANA VDQNTA
Sbjct: 740 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANAAVDQNTA 799

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 800 LPLPTQPPPKQ 810

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL
Match: A0A6J1K9Y8 (homeobox-leucine zipper protein HDG5-like OS=Cucurbita maxima OX=3661 GN=LOC111491439 PE=3 SV=1)

HSP 1 Score: 358 bits (918), Expect = 2.96e-116
Identity = 186/191 (97.38%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF
Sbjct: 621 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 680

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           A IDVDSIQLAMSGEDSSSIPLLPIGFSIVPVV STADGRLASSPPKDGATNAAVVNSGC
Sbjct: 681 AMIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVGSTADGRLASSPPKDGATNAAVVNSGC 740

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCS TQLENAN  VDQNTA
Sbjct: 741 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSPTQLENANTAVDQNTA 800

Query: 183 LPLPTQPPPKQ 193
           LPLPTQPPPKQ
Sbjct: 801 LPLPTQPPPKQ 811

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL
Match: A0A6J1E0I2 (homeobox-leucine zipper protein HDG5 OS=Momordica charantia OX=3673 GN=LOC111026034 PE=3 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.14e-88
Identity = 157/193 (81.35%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASN SQHVELMLQESCTDQSGSLVV+
Sbjct: 625 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVY 684

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           +TIDVDSIQLAMSGED S IPLLPIGFSI+PVV  TADG     P  DG+T AAVVNSGC
Sbjct: 685 STIDVDSIQLAMSGEDPSCIPLLPIGFSIIPVVGLTADGHPLPPPDVDGST-AAVVNSGC 744

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINN LCNT+HQINAAL  SST+L+N+N  V+    
Sbjct: 745 LLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINAALD-SSTRLDNSNTIVEVKNV 804

Query: 183 LPL--PTQPPPKQ 193
            PL  P  PPPKQ
Sbjct: 805 PPLSPPPPPPPKQ 815

[Close]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL
Match: A0A6J1HJ98 (homeobox-leucine zipper protein HDG5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464074 PE=3 SV=1)

HSP 1 Score: 276 bits (706), Expect = 2.90e-86
Identity = 155/193 (80.31%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASN SQHVELMLQESCTDQSGSLVV+
Sbjct: 471 QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVY 530

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           ATIDVDSIQLAMSGED S IPLLPIGFSIVPVV ST DG   S PP+DG     V NSGC
Sbjct: 531 ATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPVVGSTVDGH-PSPPPEDG-----VANSGC 590

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTA 182
           LLTVGLQVLASTIPSAKLNLSSVTAINN LCNT+HQINAALG S   +EN N   + N A
Sbjct: 591 LLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINAALG-SPASIENGNTIAEPNNA 650

Query: 183 -LPLPTQPP-PKQ 193
             P P   P PKQ
Sbjct: 651 PAPAPAPAPAPKQ 656

[Close]

BLAST of Cp4.1LG05g00220 vs. TAIR 10
Match: AT5G46880.1 (homeobox-7 )

HSP 1 Score: 194.9 bits (494), Expect = 6.0e-50
Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 4   LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFA 63
           LEVL NGNS HEVAHIANGSHPGNCISLLRINVASN   +VELMLQESC D SGSL+V++
Sbjct: 659 LEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYS 718

Query: 64  TIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCL 123
           T+DVDSIQ AM+GEDSS+IP+LP+GFSIVPV           +PP+  + N+    S CL
Sbjct: 719 TVDVDSIQQAMNGEDSSNIPILPLGFSIVPV-----------NPPEGISVNSHSPPS-CL 778

Query: 124 LTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATV 178
           LTVG+QVLAS +P+AK NLS+VT INN LC T++QI +AL  + T +  ++A V
Sbjct: 779 LTVGIQVLASNVPTAKPNLSTVTTINNHLCATVNQITSALSNTITPVIASSADV 820

[Close]

BLAST of Cp4.1LG05g00220 vs. TAIR 10
Match: AT4G17710.1 (homeodomain GLABROUS 4 )

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-41
Identity = 89/161 (55.28%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           QLE+L  G+S  EVAHIANGSH GN ISLLRINV SN S +VELMLQE+CTD SGSL+V+
Sbjct: 555 QLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVY 614

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGC 122
           +T+D  ++QLAM+GED S IPLLP+GFS+VPV             P DG   ++V +  C
Sbjct: 615 STVDPVAVQLAMNGEDPSEIPLLPVGFSVVPV------------NPSDGVEGSSVSSPSC 674

Query: 123 LLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAAL 164
           LLTV +QVL S + + +L+LS+V+ IN+++C T+++I +AL
Sbjct: 675 LLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSAL 703

[Close]

BLAST of Cp4.1LG05g00220 vs. TAIR 10
Match: AT1G73360.1 (homeodomain GLABROUS 11 )

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-33
Identity = 79/162 (48.77%), Postives = 113/162 (69.75%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVF 62
           Q +VLSNGN++ EVAHI+NGSHPGNCIS+LR + A++ +    L+LQES TD SG+ VV+
Sbjct: 560 QWDVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHSNN--MLILQESSTDSSGAFVVY 619

Query: 63  ATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVN-SG 122
           + +D+ ++ +AMSGED S IPLL  GF+I P      DG  ++S     +T++   + SG
Sbjct: 620 SPVDLAALNIAMSGEDPSYIPLLSSGFTISP------DGNGSNSEQGGASTSSGRASASG 679

Query: 123 CLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAAL 164
            L+TVG Q++ S +P+AKLN+ SV  +NN +  T+HQI  AL
Sbjct: 680 SLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTAL 713

[Close]

BLAST of Cp4.1LG05g00220 vs. TAIR 10
Match: AT1G17920.1 (homeodomain GLABROUS 12 )

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 77/167 (46.11%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 3   QLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTD-QSGSLVV 62
           Q +VLSNGNS+ EVAHI NGS+PGNCIS+LR   AS+ SQ+  L+LQESC D  S +LV+
Sbjct: 541 QWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASS-SQNNMLILQESCIDSSSAALVI 600

Query: 63  FATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSG 122
           +  +D+ ++ +AMSG+D+S IP+LP GF+I P                DG++       G
Sbjct: 601 YTPVDLPALNIAMSGQDTSYIPILPSGFAISP----------------DGSSK----GGG 660

Query: 123 CLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSST 169
            L+TVG Q++ S +  AKLN+ S+  +NN +  T+HQI   L C ST
Sbjct: 661 SLITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPST 686

[Close]

BLAST of Cp4.1LG05g00220 vs. TAIR 10
Match: AT4G04890.1 (protodermal factor 2 )

HSP 1 Score: 127.9 bits (320), Expect = 9.0e-30
Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 5   EVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFAT 64
           ++LSNG  + E+AHIANG  PGNC+SLLR+N + N SQ   L+LQESCTD SGS V++A 
Sbjct: 580 DILSNGGMVQEMAHIANGHEPGNCVSLLRVN-SGNSSQSNMLILQESCTDASGSYVIYAP 639

Query: 65  IDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCLL 124
           +D+ ++ + +SG D   + LLP GF+I+P  D +  G   +   +  +T ++    G LL
Sbjct: 640 VDIVAMNVVLSGGDPDYVALLPSGFAILP--DGSVGGGDGNQHQEMVSTTSSGSCGGSLL 699

Query: 125 TVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGC 166
           TV  Q+L  ++P+AKL+L SV  +N+ +  T+ +I AA+ C
Sbjct: 700 TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVSC 737

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q336P2	3.8e-49	59.04	Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A2ZAI7	4.9e-49	59.78	Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica OX=39946 GN=R...	[more]
Q9FJS2	8.4e-49	63.22	Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana OX=3702 GN=HDG5 PE=...	[more]
Q8L7H4	2.5e-40	55.28	Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana OX=3702 GN=HDG4 PE=...	[more]
Q69T58	4.2e-32	49.11	Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Cp4.1LG05g00220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532954.1	7.11e-127	100.00	homeobox-leucine zipper protein HDG5-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606269.1	8.14e-122	97.91	Homeobox-leucine zipper protein ROC3, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023534245.1	5.63e-120	100.00	homeobox-leucine zipper protein HDG5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931244.1	3.14e-119	99.48	homeobox-leucine zipper protein HDG5-like isoform X2 [Cucurbita moschata]	[more]
XP_022931242.1	3.14e-119	99.48	homeobox-leucine zipper protein HDG5-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG05g00220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETS6	1.52e-119	99.48	homeobox-leucine zipper protein HDG5-like isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1ET32	1.52e-119	99.48	homeobox-leucine zipper protein HDG5-like isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1K9Y8	2.96e-116	97.38	homeobox-leucine zipper protein HDG5-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E0I2	2.14e-88	81.35	homeobox-leucine zipper protein HDG5 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A6J1HJ98	2.90e-86	80.31	homeobox-leucine zipper protein HDG5-like isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of Cp4.1LG05g00220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46880.1	6.0e-50	63.22	homeobox-7	[more]
AT4G17710.1	1.7e-41	55.28	homeodomain GLABROUS 4	[more]
AT1G73360.1	5.1e-33	48.77	homeodomain GLABROUS 11	[more]
AT1G17920.1	2.4e-30	46.11	homeodomain GLABROUS 12	[more]
AT4G04890.1	9.0e-30	43.48	protodermal factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45654:SF67	SUBFAMILY NOT NAMED	coord: 4..170
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 14..159
IPR042160	Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like	PANTHER	PTHR45654	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1	coord: 4..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00220.1	Cp4.1LG05g00220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0008289	lipid binding