Cp4.1LG05g00050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g00050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type E3 ubiquitin transferase
Location	Cp4.1LG05: 912739 .. 913695 (-)
RNA-Seq Expression	Cp4.1LG05g00050
Synteny	Cp4.1LG05g00050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCACCTCCACCTCCCTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCACTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAGCCTTAGGTTGTTGCCTAAATGCAGCCACGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGTCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACTAATGAGGCCATTCCAGAGACCTCTCAGGCAAATAACCATGAGGCTGTTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGCGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCTTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCGTTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

mRNA sequence

ATGTTTTCACCTCCACCTCCCTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCACTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAGCCTTAGGTTGTTGCCTAAATGCAGCCACGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGTCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACTAATGAGGCCATTCCAGAGACCTCTCAGGCAAATAACCATGAGGCTGTTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGCGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCTTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCGTTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

Coding sequence (CDS)

ATGTTTTCACCTCCACCTCCCTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCACTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAGCCTTAGGTTGTTGCCTAAATGCAGCCACGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGTCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACTAATGAGGCCATTCCAGAGACCTCTCAGGCAAATAACCATGAGGCTGTTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGCGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCTTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCGTTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

Protein sequence

MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV

Homology

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BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 6.9e-48
Identity = 150/351 (42.74%), Postives = 182/351 (51.85%), Query Frame = 0


Query: 1   MFSPPPPLEF----PDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRL--- 60
           +F PPPP +      DD SGP FSPLVIAIIG+LASAFLL++YYT ISKY G  S L   
Sbjct: 33  IFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGR 92

Query: 61  -----SRTQDHDPNQEFEDTH---NPTLHEPWHVA-TTGLDEALIKCITVCKYKRGDGLV 120
                S    +         H       HE W+V+  +GLDE LI  ITVCKY+RGDG V
Sbjct: 93  VFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFV 152

Query: 121 EGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTA--SSP 180
             +DCSVCL EF + ESLRLLP+CSHAFH QCIDTWLKSHSNCPLCRANI  VT   +SP
Sbjct: 153 HTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASP 212

Query: 181 LQ---LPATTGNPTTNEAIPETSQANN-----HEAVSQEPGRSFGNDNAKNSVRAFSDLG 240
                 P  TG   T+E +       N      EAVS+       +D AK+      +  
Sbjct: 213 EPEGCAPGETGGDNTHEVVVVMDGLENLCEEQQEAVSRASTADDDHD-AKDVAEGMEEAN 272

Query: 241 NLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIA--------DEFGGIDEAG-SSGDV 300
                    E+R+      R + S D    N + IA        DE     E+G  +G  
Sbjct: 273 G------AAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESMEDELTAARESGLLAGGA 332

Query: 301 GSSKHSMGEDSKS----NHRKRILHCVMSPVSMKRSFSSGR--FSLTKHGR 311
           G+S+   GE+SK     + R   L   M  +  KR  S GR  FS +K GR
Sbjct: 333 GTSRRCHGENSKGRGGRSRRALQLQDAMEALPGKRLPSGGRSCFS-SKSGR 375

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BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-44
Identity = 141/345 (40.87%), Postives = 192/345 (55.65%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDD---SGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQ 60
           +F PPPP  F DDD   S  +FSPL+IA+IGIL SA +L++YYT+ISKY     + S ++
Sbjct: 33  IFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSE 92

Query: 61  DHDPNQEFEDTHNPTLHEPWHVATT--GLDEALIKCITVCKYKRGDGLVEGSDCSVCLSE 120
             + N   E   + T      ++T   GL+E++IK ITV KYK GDG V+GSDCSVCLSE
Sbjct: 93  TLNLNHNGEGFFSST----QRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSE 152

Query: 121 FQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTN 180
           F+E+ESLRLLPKC+HAFHL CIDTWLKSHSNCPLCRA +  V   +     A+ G   + 
Sbjct: 153 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPT-----ASVGQNVSV 212

Query: 181 EAIPETSQANNHEAVSQEPGRSFGNDNAK---NSVRAFSDL----------GNLVKRDTV 240
               +++ A+   +VS+      G ++     +SV    DL            L   +  
Sbjct: 213 VVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEER 272

Query: 241 IELRDGRLQQIRRSISMDHCSQNHIIIADEFGGI-DEAGSSGDVGSS-KHSMGED----- 300
            E +D     IRRS+S++  S   + IAD    I DE G SG VG+S +   GED     
Sbjct: 273 RETKDEDSLPIRRSVSLN--SGVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKT 332

Query: 301 ---SKSNHRKRILHCVMSPVS--MKRSFSSGRFSLTKH--GREHR 314
              +++N R          VS    RS S+GRF  +++  GR +R
Sbjct: 333 IPPTEANQRS-------GGVSGFFVRSLSTGRFIFSRYDRGRNYR 359

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BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-42
Identity = 123/291 (42.27%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 4   PPPP---LEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKY----YGNTSRLSRT 63
           PPPP   L+  DD S  +FSPL+IA+IGILASAF+L++YYT+ISKY      N+S  S  
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 64  QDHDPNQEF--EDTHNPTLHEPWHVATT-------GLDEALIKCITVCKYKRGDGLVEGS 123
             +  + ++  + T+N   +   +   T       GLDE+LIK ITV KY++ DG VE S
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESS 157

Query: 124 DCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPA 183
           DCSVCLSEFQE+ESLRLLPKC+HAFH+ CIDTWLKSHSNCPLCRA IV+ +A   + L  
Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL-- 217

Query: 184 TTGNPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVI---- 243
                             N + V++    S G+D+    V    DL N   R+  +    
Sbjct: 218 -----------------TNQQIVTENNSISTGDDSV---VVVNLDLENSRSRNETVNEGS 277

Query: 244 -----ELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVGSSK 270
                E++D R  + RRS S+ +     + IAD    I++   S  VG+S+
Sbjct: 278 TPKPPEMQDSRDGEERRSASL-NSGGGVVSIADILREIEDDEESAGVGTSR 305

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-35
Identity = 118/328 (35.98%), Postives = 162/328 (49.39%), Query Frame = 0


Query: 2   FSPPPPL--EFPDDD--SGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQ 61
           FSPPP    +F +D   S PN SPLVIAI GI A+AFLL  YYT++SKY  N +      
Sbjct: 37  FSPPPISYEQFLNDGVASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAAS 96

Query: 62  DHDPNQEFEDTHNP---TLHEPWHV--ATTGLDEALIKCITVCKYKRGDG--LVEGSDCS 121
           +   +    D ++P      +P+ +  +T GLD+ LIK I   K K+      + G+DCS
Sbjct: 97  ESGRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCS 156

Query: 122 VCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTG 181
           +CL EF EDESLRLLPKC+H FH+ CID WLKSHSNCPLCRA I+               
Sbjct: 157 ICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII--------------- 216

Query: 182 NPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRL 241
                  +P T Q  +H  V              N  R  S++G+  + + V+   D   
Sbjct: 217 -------VPTTQQPEHHVVV-------------MNLDRFTSNVGS-AEGNVVV---DDHR 276

Query: 242 QQIRRSISMDH---CSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHC 301
           +++  SIS  H    S   I++     G +E G+             D ++ +R+++   
Sbjct: 277 EEVSVSISSHHPSWFSAADIVLRISRDGEEEEGN------------YDLENGNREKL--- 306

Query: 302 VMSPVSMKRSFSSGRFSLTKHGREHRGL 316
               V +KRSFSSG   L   GR  R L
Sbjct: 337 ----VDLKRSFSSGGLVLGTQGRTRRSL 306

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-33
Identity = 83/207 (40.10%), Postives = 125/207 (60.39%), Query Frame = 0


Query: 11  PDDDSGPNFSPL-VIAIIGILASAFLLITYYTIISKYYGNT-------SRLSRTQDHDP- 70
           P  DS  +   + +I I G + +  +L+T + +++K++ ++       +  S  +D+D  
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTV 131

Query: 71  -NQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 130
             +EF+D      H  W + TTGL +++I  IT+C YKRGDGL+E +DC VCL+EF+EDE
Sbjct: 132 MEEEFQDREQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDE 191

Query: 131 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI--VSVTA---SSPLQL-PATTGNPTT 190
           SLRLLPKC+HAFH+ CIDTWL SH+NCPLCRA I  +SVT    S P+++ P  +G+   
Sbjct: 192 SLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLE 251

Query: 191 NEAIPETSQANNHEAVSQEPGRSFGND 202
           N+ + E         V  +   S  +D
Sbjct: 252 NDGVDEEDHGEIENRVDSDFKESDDSD 275

[Close]

BLAST of Cp4.1LG05g00050 vs. NCBI nr
Match: XP_023533677.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634 bits (1636), Expect = 8.44e-229
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD
Sbjct: 215 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. NCBI nr
Match: KAG6606257.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036198.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 629 bits (1623), Expect = 8.09e-227
Identity = 314/318 (98.74%), Postives = 317/318 (99.69%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           +LRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 NLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQAN+HE +SQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD
Sbjct: 215 TSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. NCBI nr
Match: XP_022996182.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita maxima])

HSP 1 Score: 629 bits (1621), Expect = 1.63e-226
Identity = 314/318 (98.74%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQAN+HE +SQEPGRSFGNDNAKNSVRAFSDLGNLVKRD VIELRDGRLQQIRRSISMD
Sbjct: 215 TSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDAVIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. NCBI nr
Match: XP_022931173.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita moschata])

HSP 1 Score: 627 bits (1618), Expect = 4.68e-226
Identity = 313/318 (98.43%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           +LRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 NLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQAN+HE +SQEPGRSFGNDNAKNSVRAFSDLGNLVKRDT IELRDGRLQQIRRSISMD
Sbjct: 215 TSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTFIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. NCBI nr
Match: KAA0038569.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 548 bits (1411), Expect = 3.58e-194
Identity = 274/325 (84.31%), Postives = 299/325 (92.00%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDD+SGPNFSPLVIAIIGILASA LL+TYYTIISKY GNT+RLS T ++D
Sbjct: 37  MFSPPPPLEFPDDNSGPNFSPLVIAIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYD 96

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           P++E+ED HNPTLHEPWHVATTGLDEALIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 97  PSEEYEDNHNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDE 156

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI+S+ A SP+QLPA+T  P TNE +PE
Sbjct: 157 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPE 216

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           +SQ N+HEAVS + G+SF N++AKNSVRAFSDLGNL KRDT+IELRDGRLQQIRRSISMD
Sbjct: 217 SSQDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMD 276

Query: 241 HCSQNHIIIAD-------EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVS 300
           HCSQN +IIAD       EFGGIDEAGSSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVS
Sbjct: 277 HCSQNRLIIADVLRLNEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVS 336

Query: 301 MKRSFSSGRFSLTKHGREHRGLAPV 318
           MKRSFSSGR SLTKHGREHRG+APV
Sbjct: 337 MKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL
Match: A0A6J1K181 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 PE=3 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 7.90e-227
Identity = 314/318 (98.74%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQAN+HE +SQEPGRSFGNDNAKNSVRAFSDLGNLVKRD VIELRDGRLQQIRRSISMD
Sbjct: 215 TSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDAVIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL
Match: A0A6J1EXP0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111437432 PE=3 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 2.26e-226
Identity = 313/318 (98.43%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD
Sbjct: 35  MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 94

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 95  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 154

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           +LRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE
Sbjct: 155 NLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 214

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQAN+HE +SQEPGRSFGNDNAKNSVRAFSDLGNLVKRDT IELRDGRLQQIRRSISMD
Sbjct: 215 TSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTFIELRDGRLQQIRRSISMD 274

Query: 241 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 300
           HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS
Sbjct: 275 HCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSS 334

Query: 301 GRFSLTKHGREHRGLAPV 318
           GRFSLTKHGREHRGLAPV
Sbjct: 335 GRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL
Match: A0A5D3E5F1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004560 PE=3 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 1.74e-194
Identity = 274/325 (84.31%), Postives = 299/325 (92.00%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDD+SGPNFSPLVIAIIGILASA LL+TYYTIISKY GNT+RLS T ++D
Sbjct: 37  MFSPPPPLEFPDDNSGPNFSPLVIAIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYD 96

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           P++E+ED HNPTLHEPWHVATTGLDEALIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 97  PSEEYEDNHNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDE 156

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI+S+ A SP+QLPA+T  P TNE +PE
Sbjct: 157 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPE 216

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           +SQ N+HEAVS + G+SF N++AKNSVRAFSDLGNL KRDT+IELRDGRLQQIRRSISMD
Sbjct: 217 SSQDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMD 276

Query: 241 HCSQNHIIIAD-------EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVS 300
           HCSQN +IIAD       EFGGIDEAGSSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVS
Sbjct: 277 HCSQNRLIIADVLRLNEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVS 336

Query: 301 MKRSFSSGRFSLTKHGREHRGLAPV 318
           MKRSFSSGR SLTKHGREHRG+APV
Sbjct: 337 MKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL
Match: A0A1S4E5H2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 4.97e-194
Identity = 274/325 (84.31%), Postives = 298/325 (91.69%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPDD+SGPNFSPLVIAIIGILASA LL+TYYTIISKY GNT+RLS T ++D
Sbjct: 37  MFSPPPPLEFPDDNSGPNFSPLVIAIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYD 96

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           P++E+ED HNPTLHEPWHVATTGLDEALIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE
Sbjct: 97  PSEEYEDNHNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDE 156

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI+S+ A SP+QLPA+T  P TNE +PE
Sbjct: 157 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPE 216

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           +SQ N+HEAVS + G+SF N++AKNSVRAFSDLGNL KRDT IELRDGRLQQIRRSISMD
Sbjct: 217 SSQDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMD 276

Query: 241 HCSQNHIIIAD-------EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVS 300
           HCSQN +IIAD       EFGGIDEAGSSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVS
Sbjct: 277 HCSQNRLIIADVLRLNEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVS 336

Query: 301 MKRSFSSGRFSLTKHGREHRGLAPV 318
           MKRSFSSGR SLTKHGREHRG+APV
Sbjct: 337 MKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL
Match: A0A0A0LH71 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE=3 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 3.74e-191
Identity = 272/325 (83.69%), Postives = 297/325 (91.38%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHD 60
           MFSPPPPLEFPD+ SGP+FSPLVIAIIGILASAFLL+TYYTIISKY GNT+RLS T +HD
Sbjct: 37  MFSPPPPLEFPDN-SGPHFSPLVIAIIGILASAFLLVTYYTIISKYCGNTNRLSGTGNHD 96

Query: 61  PNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 120
           P++E+ED HNPT HEPWHVATTGLDEALIK ITVCKYKR DGLVEGSDCSVCLSEFQEDE
Sbjct: 97  PSEEYEDNHNPTFHEPWHVATTGLDEALIKSITVCKYKREDGLVEGSDCSVCLSEFQEDE 156

Query: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPE 180
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI+S+ A SP+QLPA+T  P TNE +PE
Sbjct: 157 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPE 216

Query: 181 TSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMD 240
           TSQ N++EAVS + G+SF N++ KNSVRAFSDLGNL KRDT+IELRDGRLQQIRRSISMD
Sbjct: 217 TSQDNDYEAVSLDSGQSFSNEDGKNSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMD 276

Query: 241 HCSQNHIIIAD-------EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVS 300
           HCSQNHIIIAD       +FGGIDEAGSSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVS
Sbjct: 277 HCSQNHIIIADVLRLNEDDFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVS 336

Query: 301 MKRSFSSGRFSLTKHGREHRGLAPV 318
           MKRSFSSGR SLTKHGREHRG+APV
Sbjct: 337 MKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]

BLAST of Cp4.1LG05g00050 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-45
Identity = 141/345 (40.87%), Postives = 192/345 (55.65%), Query Frame = 0


Query: 1   MFSPPPPLEFPDDD---SGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQ 60
           +F PPPP  F DDD   S  +FSPL+IA+IGIL SA +L++YYT+ISKY     + S ++
Sbjct: 33  IFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSE 92

Query: 61  DHDPNQEFEDTHNPTLHEPWHVATT--GLDEALIKCITVCKYKRGDGLVEGSDCSVCLSE 120
             + N   E   + T      ++T   GL+E++IK ITV KYK GDG V+GSDCSVCLSE
Sbjct: 93  TLNLNHNGEGFFSST----QRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSE 152

Query: 121 FQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTN 180
           F+E+ESLRLLPKC+HAFHL CIDTWLKSHSNCPLCRA +  V   +     A+ G   + 
Sbjct: 153 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPT-----ASVGQNVSV 212

Query: 181 EAIPETSQANNHEAVSQEPGRSFGNDNAK---NSVRAFSDL----------GNLVKRDTV 240
               +++ A+   +VS+      G ++     +SV    DL            L   +  
Sbjct: 213 VVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEER 272

Query: 241 IELRDGRLQQIRRSISMDHCSQNHIIIADEFGGI-DEAGSSGDVGSS-KHSMGED----- 300
            E +D     IRRS+S++  S   + IAD    I DE G SG VG+S +   GED     
Sbjct: 273 RETKDEDSLPIRRSVSLN--SGVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKT 332

Query: 301 ---SKSNHRKRILHCVMSPVS--MKRSFSSGRFSLTKH--GREHR 314
              +++N R          VS    RS S+GRF  +++  GR +R
Sbjct: 333 IPPTEANQRS-------GGVSGFFVRSLSTGRFIFSRYDRGRNYR 359

[Close]

BLAST of Cp4.1LG05g00050 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-43
Identity = 123/291 (42.27%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 4   PPPP---LEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKY----YGNTSRLSRT 63
           PPPP   L+  DD S  +FSPL+IA+IGILASAF+L++YYT+ISKY      N+S  S  
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 64  QDHDPNQEF--EDTHNPTLHEPWHVATT-------GLDEALIKCITVCKYKRGDGLVEGS 123
             +  + ++  + T+N   +   +   T       GLDE+LIK ITV KY++ DG VE S
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESS 157

Query: 124 DCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPA 183
           DCSVCLSEFQE+ESLRLLPKC+HAFH+ CIDTWLKSHSNCPLCRA IV+ +A   + L  
Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL-- 217

Query: 184 TTGNPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVI---- 243
                             N + V++    S G+D+    V    DL N   R+  +    
Sbjct: 218 -----------------TNQQIVTENNSISTGDDSV---VVVNLDLENSRSRNETVNEGS 277

Query: 244 -----ELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVGSSK 270
                E++D R  + RRS S+ +     + IAD    I++   S  VG+S+
Sbjct: 278 TPKPPEMQDSRDGEERRSASL-NSGGGVVSIADILREIEDDEESAGVGTSR 305

[Close]

BLAST of Cp4.1LG05g00050 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 9.6e-37
Identity = 118/328 (35.98%), Postives = 162/328 (49.39%), Query Frame = 0


Query: 2   FSPPPPL--EFPDDD--SGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQ 61
           FSPPP    +F +D   S PN SPLVIAI GI A+AFLL  YYT++SKY  N +      
Sbjct: 37  FSPPPISYEQFLNDGVASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAAS 96

Query: 62  DHDPNQEFEDTHNP---TLHEPWHV--ATTGLDEALIKCITVCKYKRGDG--LVEGSDCS 121
           +   +    D ++P      +P+ +  +T GLD+ LIK I   K K+      + G+DCS
Sbjct: 97  ESGRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCS 156

Query: 122 VCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTG 181
           +CL EF EDESLRLLPKC+H FH+ CID WLKSHSNCPLCRA I+               
Sbjct: 157 ICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII--------------- 216

Query: 182 NPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRL 241
                  +P T Q  +H  V              N  R  S++G+  + + V+   D   
Sbjct: 217 -------VPTTQQPEHHVVV-------------MNLDRFTSNVGS-AEGNVVV---DDHR 276

Query: 242 QQIRRSISMDH---CSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHC 301
           +++  SIS  H    S   I++     G +E G+             D ++ +R+++   
Sbjct: 277 EEVSVSISSHHPSWFSAADIVLRISRDGEEEEGN------------YDLENGNREKL--- 306

Query: 302 VMSPVSMKRSFSSGRFSLTKHGREHRGL 316
               V +KRSFSSG   L   GR  R L
Sbjct: 337 ----VDLKRSFSSGGLVLGTQGRTRRSL 306

[Close]

BLAST of Cp4.1LG05g00050 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34
Identity = 83/207 (40.10%), Postives = 125/207 (60.39%), Query Frame = 0


Query: 11  PDDDSGPNFSPL-VIAIIGILASAFLLITYYTIISKYYGNT-------SRLSRTQDHDP- 70
           P  DS  +   + +I I G + +  +L+T + +++K++ ++       +  S  +D+D  
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTV 131

Query: 71  -NQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE 130
             +EF+D      H  W + TTGL +++I  IT+C YKRGDGL+E +DC VCL+EF+EDE
Sbjct: 132 MEEEFQDREQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDE 191

Query: 131 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANI--VSVTA---SSPLQL-PATTGNPTT 190
           SLRLLPKC+HAFH+ CIDTWL SH+NCPLCRA I  +SVT    S P+++ P  +G+   
Sbjct: 192 SLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLE 251

Query: 191 NEAIPETSQANNHEAVSQEPGRSFGND 202
           N+ + E         V  +   S  +D
Sbjct: 252 NDGVDEEDHGEIENRVDSDFKESDDSD 275

[Close]

BLAST of Cp4.1LG05g00050 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32
Identity = 92/241 (38.17%), Postives = 124/241 (51.45%), Query Frame = 0


Query: 2   FSPPPPLEFPDDDSG---PNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQD 61
           + PPPP   P  +     P    +V +II  L   F L  + T   +    +     T  
Sbjct: 25  YPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQ 84

Query: 62  HDPNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQE 121
            +   E E+      H  W + T GL  + I  ITV  +K+G+G+++G++CSVCL+EF+E
Sbjct: 85  QEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEE 144

Query: 122 DESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAI 181
           DESLRLLPKCSHAFHL CIDTWL SH NCPLCRA ++ +T   P Q   T   P      
Sbjct: 145 DESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT-EPPHQETETNHQP------ 204

Query: 182 PETSQANNHEAVSQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSIS 240
              S+++N     Q+  RS  N N     RA SDL N            GR++ +RRS S
Sbjct: 205 --DSESSNDLRGRQDSSRSRRNHNI-FLPRAQSDLANY--------CGSGRVENVRRSFS 247

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLY8	6.9e-48	42.74	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LF64	4.6e-44	40.87	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.9e-42	42.27	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	1.3e-35	35.98	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	2.8e-33	40.10	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of Cp4.1LG05g00050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533677.1	8.44e-229	100.00	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606257.1	8.09e-227	98.74	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_022996182.1	1.63e-226	98.74	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita maxima]	[more]
XP_022931173.1	4.68e-226	98.43	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita moschata]	[more]
KAA0038569.1	3.58e-194	84.31	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-...	[more]

BLAST of Cp4.1LG05g00050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K181	7.90e-227	98.74	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 P...	[more]
A0A6J1EXP0	2.26e-226	98.43	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111437432...	[more]
A0A5D3E5F1	1.74e-194	84.31	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E5H2	4.97e-194	84.31	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 ...	[more]
A0A0A0LH71	3.74e-191	83.69	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE...	[more]

BLAST of Cp4.1LG05g00050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	3.3e-45	40.87	RING/U-box superfamily protein	[more]
AT3G03550.1	1.4e-43	42.27	RING/U-box superfamily protein	[more]
AT4G17905.1	9.6e-37	35.98	RING/U-box superfamily protein	[more]
AT1G72220.1	2.0e-34	40.10	RING/U-box superfamily protein	[more]
AT5G10380.1	1.1e-32	38.17	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 9.5E-8 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 6.6E-14 score: 52.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 84..159 e-value: 6.0E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..280
None	No IPR available	PANTHER	PTHR45676:SF80	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 1..308
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 108..151 e-value: 9.0075E-18 score: 73.4983
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 103..158
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 1..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00050.1	Cp4.1LG05g00050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane