Cp4.1LG04g14450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g14450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Cp4.1LG04: 11533140 .. 11537998 (-)
RNA-Seq Expression	Cp4.1LG04g14450
Synteny	Cp4.1LG04g14450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATCAGGTTAAATAATTCATCTGGGTAACAAGAAATAATTCATCTTTATCCGTCTCAACAGGAAGTTGCGGATTTCAGCTGCGACAAGCTATCGTGGAGGGAGAGTACAACGGCAACGTAGTCGGAGGGACGGCGGTTTTCCGGCTGGTTCTTGGGTATCGCTCAGCCAGGACATTCCCGTTTCAGAGAAATGGATGCTGTGATTGGCTACCATTTTACACTGGTTCATGATCTCTACAGCTATTCCGGTCGAATAAGATTAAGGATTCCGTATTTTCCGACGAGATTCATTACAATTGTACTGAATAAATTTTCGTAGTCTGGACGCTTACATTCATATCTTCTGTTAGCTAGTGCATTCGAATATCATCATTAACTTTCCATAATTCATTGAATTGAATGAAGCTGTTTCTATATAGGGCTGTGCAGCAAATAGAGATTTAGTCAATGTAGACCGTTAAAACTTTTATGGGCATTCAATGTGTGCTAGCTGCCTCCATTTATGCGTTTGAGTTACATCTGCTTTATAAGGCCCTGTAATTCTGCAGGCTTAACTTTTACTTTGATCTCTCTAATCTTTATGGAGATGGAGATTGGAGATTTCAATTTTTACTGTCCTTTAGACGTTACTTTCTTGATGTTCTCCAAGTGTTTGCATTTGCTTCAGCTCTGACATTGGCAAGGTATTGTCTAAGATTTATCTGGTCTGAAAGCAGGTGATGATCATTTGTACATTTTATTTGTGCAGGAGTTGTTGGGATGAGATTGCTTGATTTGAAGGGTTTCTCAAATCTTATGATTGTTTATATATATGTATATATATGTTCATAGTAATTTCAGAGGTCTTTGTTTGGCTGCTGAGAAAAGAAAGAAGGGAAGAAACTTAGACTTGGGATCTTTCTTGTGAAAATGATAGTGTTGGTTTTGGTTACATTCTAGACTGTTTCTGATATTCAATCAGAGGAGCTGACTTTCCCAAAACAACATTAAATAGAATGTTTGTTTGTTTTCCATGTCATGGAATCAATTAGAAGATAATTGATGTCTGATTGTGTGTTTTATTTAGTGTTGCACAAATTCATTGTCAGCTTCATAAGAATTGGAAGGATCAACCTTACCAACCAGGAAATTTGGTGATCTGTTCATCATTAAAGAATAAATGAGGAATGAATTTTCAGATTTGGTAGTGAACAATATGTGTAAAAGTCCAAGCATGGAGAAGAACAAAGGGAAAGTTGATGATGTTGAGTCATTTAAGAGAAGAAACTGTATTGTACAAGAGAGTGAAGATGATCCTGGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGACGAGTTCAATCAACGACGAGCTGCCCGAGCTTGTTGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGGAACTTCTTGTGAGGAGTGCTTTGAGGAGAACTGTGACACACAAAATGGTTATGTACCCTGCATGCTCAAAAGTGATGTAGCAGAAAGCGACATCAAAACAACTGAAGAATCTGAGGACTTGGAGTCGTCGATTTTGAGTACTGACTCAACACAGGTCGTTGAGAAAAATTTATTGAACAAAGTAAATGAGAACCAAAAGTTTTGTTATGATGCAAAAGATGATATCCCTTCTGACTTTTCCAATAAGAAATCTGTGCCTAAATTGCATCTTGATAGAAAGGTGAGAATAAACTCAGCTTAGCTTACTTGTTCATATCTTTGTAAAATTCAATGACTTGATTTGATTGTCTGCAAACTTTGTAGGTAACAGGTAAAAGGGTAGCAGCTTCTTCCAACTCTATTGCAATATCATTGACTAAGATACTTGATGAAAACAAGCTCAAAGGCAAAGGAGTTGCTGGAAGCAACAATGAACATGGAAACGTCTTTCACGATTCCGGTTTATCACCGAGCGGAGTAGGGGGCGGTGGCAGGACATCCACAGCCGAAGACTATGCACCAGAAAACCAAACAGGACGGTACAGAAGCATTTATGGCTTTGTTTATCAGAGAGATGATGGTTCCTCTGAGGTTGATCCTGCTTTCAACACAGTGAGAAGGCCCTCATTTTCATCTTATGTGGGCAGTGACTCACTTGGGTCGAATGACAGCACCAACAGCTCTCATTCTTTTGCTTTTCCAATGTAATTTTGCTTATCTTTTCATTAGCTCTTGCTCCCTCATTTGTTGAAACTGAAACATATAGCTTATTATCTTCGCCTTCTTGAATTCACAGTTTACAGACAGAATGGAACGGAAGCCCAGAAAGAATGGCGACCGCTGACCCGAGGCAAACACGAAGGCTGCAACTGTGGAGGCTATGTCTTCCCTGCTGCAATTTCTGAGCATCTTATTGCCCAACCTGTCAGTGTTCTTCATTGTTTTCACTCACATTCATTATCATTTTGTATAAGATATGTAAAATTGCATTGAGCCCAAAATTTTTAAGTTTATAATCATAAAAAAATAATGTTTTGGATACATCCTTTACATTTGCTCTCACTTTTACCTCAATATTAGCTTTTAGAGAAAATAAGACATTTGGAAGTGTCTTACATCTCTAGGAAGGAACTGTAATAACCCGAGTGACCCAAGCTCACTGCTAGCAGATATTGTCCTTTTTAGACTTTCCCTTCTAGGCTTCCCTCAAAGTTTTAAAACACGTCTGCTAGGGAGAGTTTTCCATACCTTATAAAGAATGTTTCGTTTCCCTCTCCAACTGATGTGGGATCTCACAGTCCACCTTCCTCGGGCCAGCGTCCTCGTTGGCACACCGCCCGGTGTCTAGCTCTGATACCATTTGTAACAGCTCAAGCCCACCGCTAGCAGATATCTCTTTGGGGTTTCTCTTTTGGGTTTCCCCTCAAAGTTTTAAAATGCATCTATTAGAGAGAGGTTTCCACGCCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACCGATGTGGAATTTCATTGGAACACTCCATTGGGAGGATATGCCCAGCTAAGAAGATAAAATTTCTCATACCTTAAATAGTTTAAGATTTTGGTTCGACTATTCGAGAAAAATTCAAATATTACCCCATACCTACTTCTTCAATTTAACTTTTGACACCTTACTAAGTAATATACAATTTTATTCAAATAACGTCACACTATTCTCGAACGCTATTGATGTGGTGAATTATAAATGGAAGTATGGTTAAATGTAGTACTAGAAAAGTAATGTCCTCTCTATTAGTGAGTTAATATAGCATTAAAGTACTATGTTCTGAGCTTAAATGTTTGTCATTTCATATTAATAATCTATCTGTTAGCCCTCTTATATGGGTAGTATAGGAGCCCACACATGAAGAGATTGTCAAGGAGAAAATCGAAAACATTGAACTCATAGGTCTGAATCTGATGCTGATTTAACCTATGCATAAACACAAAGAAACGTGGTCCTACACTTGATCCTTAGACAGATACTCCAAGTAAACAACAGTTGCTTATGAAACTATCTACCACATTCTTAATCCCTCATTGCTGAAATTTGACATCTCTTTGGCTTCTGACAGGCTCAAAAGATAGTTGAAATCAGGTGAAGAAGATGAGATGGTGGCAATTGCAAGATAAGATGTTCCTCAATGATAAAAGAGGACCACAATCAGTTTGCTGGAAGTTTCTAGAGATCTGTTGAGGCAAATGGTTGAGTTGATAGATAGCTCAGTCCAATGCCGACCCAACTTGGAAGGATTCAACTCAATGGTGCCCACTTTTGGTATTAGAGTCTTGAAGGTAAAGTATCTAATGATGCTCCATTGGACCATATAATATGCAGTGGAAACCACTGTTGGCCAAATGAAAAAGGAGAAGAAAAAACCATTATCTTGGGAAGGCAAATGCCAAATCTGTCTGTTTAGGTAACACTTTCTTTTCAACTATTACGTCCCACTCCAATGCCATGCCACCATGTTTTGATTAAGTCTAAACAACTCTCAGGTAGCACGAGATTTGCAGGAGTTGACAGAGTCATCGAGCAGGCAGGGGGGCGGGTGATGGAAAGTAAGGACCACCATCAGCCACCACCATGTGCCAACCCCGAATCGAAGGCACGTCATTGCTCGGCCAACGCCACAATCAATTGCCATCTGAATTATGAATGTTGAGGCCTTTTAGAAGCAGGATGGGGGCGACAATGAAAACTGACCCTTCACAAGTCACGTCTCACTTGATCAAACATGCCAATTCCCATTACAGGACCATTGCAGCTGAGTGAGTACCTTGGAGCAATCCAATATCCATCCACACAAGCAACCACAGAGAGATAGAAGTGGGAATTGGAGTCAAACATTAACATTTCACTCCAACACTCGACTCGATCAGCTTCTCTCGAGTCGAAATTCGAGGTTTCTTGGCCGATATGGACGAGAAAAGTGAAACAAAAATGAGATGCTAGGACCACAAAAGGCATGTGATAATGAGTCAGCTGAGACAAAGGGGGGGTTTTGGTTAGCAATGGTAATCAAAGAGCAAGTGACAGATGGGCCTTTGGGGCAGAAGAAAGGCAAGGCTTATCAGCCTTTTCATTATCAAATAAATGCTAAGATTACATGTGAGCTGTGATGCTTCAATTCACAGCTCAAGGACCCATCTCTTTCAATTTTAATTACATTTTGTTTTCTCTTTTCTAGGCATTTTGAGTCTTTTGTTTTTCGCTAAATGTTGAAAAATATGGAGCATTTGAGGGAGCCATAACAATAGGAAGAAGAGAGGAAATTCTGTGTAGCGGTAACATATTCACTACTAGTAGATATTGTCCGTTTTGGCTTGTTATATATCGACATCAACTTCGTGTTT

mRNA sequence

TAATCAGGTTAAATAATTCATCTGGGTAACAAGAAATAATTCATCTTTATCCGTCTCAACAGGAAGTTGCGGATTTCAGCTGCGACAAGCTATCGTGGAGGGAGAGTACAACGGCAACGTAGTCGGAGGGACGGCGGTTTTCCGGCTGGTTCTTGGGTATCGCTCAGCCAGGACATTCCCGTTTCAGAGAAATGGATGCTGTGATTGGCTACCATTTTACACTGGTTCATGATCTCTACAGCTATTCCGGTCGAATAAGATTAAGGATTCCGTATTTTCCGACGAGATTCATTACAATTGTACTGAATAAATTTTCGTAGTCTGGACGCTTACATTCATATCTTCTGTTAGCTAGTGCATTCGAATATCATCATTAACTTTCCATAATTCATTGAATTGAATGAAGCTGTTTCTATATAGGGCTGTGCAGCAAATAGAGATTTAGTCAATGTAGACCGTTAAAACTTTTATGGGCATTCAATGTGTGCTAGCTGCCTCCATTTATGCGTTTGAGTTACATCTGCTTTATAAGGCCCTGTAATTCTGCAGGCTTAACTTTTACTTTGATCTCTCTAATCTTTATGGAGATGGAGATTGGAGATTTCAATTTTTACTGTCCTTTAGACGTTACTTTCTTGATGTTCTCCAAGTGTTTGCATTTGCTTCAGCTCTGACATTGGCAAGTGTTGCACAAATTCATTGTCAGCTTCATAAGAATTGGAAGGATCAACCTTACCAACCAGGAAATTTGGTGATCTGTTCATCATTAAAGAATAAATGAGGAATGAATTTTCAGATTTGGTAGTGAACAATATGTGTAAAAGTCCAAGCATGGAGAAGAACAAAGGGAAAGTTGATGATGTTGAGTCATTTAAGAGAAGAAACTGTATTGTACAAGAGAGTGAAGATGATCCTGGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGACGAGTTCAATCAACGACGAGCTGCCCGAGCTTGTTGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGGAACTTCTTGTGAGGAGTGCTTTGAGGAGAACTGTGACACACAAAATGGTTATGTACCCTGCATGCTCAAAAGTGATGTAGCAGAAAGCGACATCAAAACAACTGAAGAATCTGAGGACTTGGAGTCGTCGATTTTGAGTACTGACTCAACACAGGTCGTTGAGAAAAATTTATTGAACAAAGTAAATGAGAACCAAAAGTTTTGTTATGATGCAAAAGATGATATCCCTTCTGACTTTTCCAATAAGAAATCTGTGCCTAAATTGCATCTTGATAGAAAGGTAACAGGTAAAAGGGTAGCAGCTTCTTCCAACTCTATTGCAATATCATTGACTAAGATACTTGATGAAAACAAGCTCAAAGGCAAAGGAGTTGCTGGAAGCAACAATGAACATGGAAACGTCTTTCACGATTCCGGTTTATCACCGAGCGGAGTAGGGGGCGGTGGCAGGACATCCACAGCCGAAGACTATGCACCAGAAAACCAAACAGGACGGTACAGAAGCATTTATGGCTTTGTTTATCAGAGAGATGATGGTTCCTCTGAGGTTGATCCTGCTTTCAACACACTCTTGCTCCCTCATTTGTTGAAACTGAAACATATAGCTTATTATCTTCGCCTTCTTGAATTCACAGTTTACAGACAGAATGGAACGGAAGCCCAGAAAGAATGGCGACCGCTGACCCGAGGCAAACACGAAGGCTGCAACTGTGGAGGCTATGTCTTCCCTGCTGCAATTTCTGAGCATCTTATTGCCCAACCTGCTCAAAAGATAGTTGAAATCAGGTGAAGAAGATGAGATGGTGGCAATTGCAAGATAAGATGTTCCTCAATGATAAAAGAGGACCACAATCAGTTTGCTGGAAGTTTCTAGAGATCTGTTGAGGCAAATGGTTGAGTTGATAGATAGCTCAGTCCAATGCCGACCCAACTTGGAAGGATTCAACTCAATGGTGCCCACTTTTGGTATTAGAGTCTTGAAGGTAAAGTATCTAATGATGCTCCATTGGACCATATAATATGCAGTGGAAACCACTGTTGGCCAAATGAAAAAGGAGAAGAAAAAACCATTATCTTGGGAAGGCAAATGCCAAATCTGTCTGTTTAGGTAGCACGAGATTTGCAGGAGTTGACAGAGTCATCGAGCAGGCAGGGGGGCGGGTGATGGAAAGTAAGGACCACCATCAGCCACCACCATGTGCCAACCCCGAATCGAAGGCACGTCATTGCTCGGCCAACGCCACAATCAATTGCCATCTGAATTATGAATGTTGAGGCCTTTTAGAAGCAGGATGGGGGCGACAATGAAAACTGACCCTTCACAAGTCACGTCTCACTTGATCAAACATGCCAATTCCCATTACAGGACCATTGCAGCTGAGTGAGTACCTTGGAGCAATCCAATATCCATCCACACAAGCAACCACAGAGAGATAGAAGTGGGAATTGGAGTCAAACATTAACATTTCACTCCAACACTCGACTCGATCAGCTTCTCTCGAGTCGAAATTCGAGGTTTCTTGGCCGATATGGACGAGAAAAGTGAAACAAAAATGAGATGCTAGGACCACAAAAGGCATGTGATAATGAGTCAGCTGAGACAAAGGGGGGGTTTTGGTTAGCAATGGTAATCAAAGAGCAAGTGACAGATGGGCCTTTGGGGCAGAAGAAAGGCAAGGCTTATCAGCCTTTTCATTATCAAATAAATGCTAAGATTACATGTGAGCTGTGATGCTTCAATTCACAGCTCAAGGACCCATCTCTTTCAATTTTAATTACATTTTGTTTTCTCTTTTCTAGGCATTTTGAGTCTTTTGTTTTTCGCTAAATGTTGAAAAATATGGAGCATTTGAGGGAGCCATAACAATAGGAAGAAGAGAGGAAATTCTGTGTAGCGGTAACATATTCACTACTAGTAGATATTGTCCGTTTTGGCTTGTTATATATCGACATCAACTTCGTGTTT

Coding sequence (CDS)

ATGAGGAATGAATTTTCAGATTTGGTAGTGAACAATATGTGTAAAAGTCCAAGCATGGAGAAGAACAAAGGGAAAGTTGATGATGTTGAGTCATTTAAGAGAAGAAACTGTATTGTACAAGAGAGTGAAGATGATCCTGGTGAATCAGAAGCAAGTGGAGATAGAATGAGTCGGTATTCCTCGACGAGTTCAATCAACGACGAGCTGCCCGAGCTTGTTGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGGAACTTCTTGTGAGGAGTGCTTTGAGGAGAACTGTGACACACAAAATGGTTATGTACCCTGCATGCTCAAAAGTGATGTAGCAGAAAGCGACATCAAAACAACTGAAGAATCTGAGGACTTGGAGTCGTCGATTTTGAGTACTGACTCAACACAGGTCGTTGAGAAAAATTTATTGAACAAAGTAAATGAGAACCAAAAGTTTTGTTATGATGCAAAAGATGATATCCCTTCTGACTTTTCCAATAAGAAATCTGTGCCTAAATTGCATCTTGATAGAAAGGTAACAGGTAAAAGGGTAGCAGCTTCTTCCAACTCTATTGCAATATCATTGACTAAGATACTTGATGAAAACAAGCTCAAAGGCAAAGGAGTTGCTGGAAGCAACAATGAACATGGAAACGTCTTTCACGATTCCGGTTTATCACCGAGCGGAGTAGGGGGCGGTGGCAGGACATCCACAGCCGAAGACTATGCACCAGAAAACCAAACAGGACGGTACAGAAGCATTTATGGCTTTGTTTATCAGAGAGATGATGGTTCCTCTGAGGTTGATCCTGCTTTCAACACACTCTTGCTCCCTCATTTGTTGAAACTGAAACATATAGCTTATTATCTTCGCCTTCTTGAATTCACAGTTTACAGACAGAATGGAACGGAAGCCCAGAAAGAATGGCGACCGCTGACCCGAGGCAAACACGAAGGCTGCAACTGTGGAGGCTATGTCTTCCCTGCTGCAATTTCTGAGCATCTTATTGCCCAACCTGCTCAAAAGATAGTTGAAATCAGGTGA

Protein sequence

MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYSSTSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVAESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGGGGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLPHLLKLKHIAYYLRLLEFTVYRQNGTEAQKEWRPLTRGKHEGCNCGGYVFPAAISEHLIAQPAQKIVEIR

Homology

[Close]

BLAST of Cp4.1LG04g14450 vs. NCBI nr
Match: XP_023531769.1 (uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551 bits (1419), Expect = 3.64e-195
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
           ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK
Sbjct: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240
           LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240

Query: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLP 286
           GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNT+  P
Sbjct: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRP 286

[Close]

BLAST of Cp4.1LG04g14450 vs. NCBI nr
Match: XP_022933900.1 (uncharacterized protein LOC111441174 [Cucurbita moschata] >KAG7021566.1 hypothetical protein SDJN02_15292 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 532 bits (1370), Expect = 1.01e-187
Identity = 275/286 (96.15%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVVNNMCKSPSMEKNKG VDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           S SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKS+VA
Sbjct: 61  S-SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
           ESDI+TTEESED+ESSI+STDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK
Sbjct: 121 ESDIETTEESEDVESSIMSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240
           LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNE GNVFHDSGL PSGVGG
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNERGNVFHDSGLPPSGVGG 240

Query: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLP 286
           GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNT+  P
Sbjct: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRP 285

[Close]

BLAST of Cp4.1LG04g14450 vs. NCBI nr
Match: XP_022969028.1 (uncharacterized protein LOC111468138 [Cucurbita maxima])

HSP 1 Score: 530 bits (1365), Expect = 6.05e-187
Identity = 273/286 (95.45%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKS+VA
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
            SDI+TTEESED+ESSILSTDSTQVVEKNLLNKVNENQKFCYDAKD+IPSDFSNKKSVPK
Sbjct: 121 ASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKKSVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240
           LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN EHGNVF +SGLSPSGVGG
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNIEHGNVFRNSGLSPSGVGG 240

Query: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLP 286
            GRTSTA+DYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNT+  P
Sbjct: 241 SGRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRP 286

[Close]

BLAST of Cp4.1LG04g14450 vs. NCBI nr
Match: KAG6587606.1 (hypothetical protein SDJN03_16171, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514 bits (1323), Expect = 3.07e-180
Identity = 277/338 (81.95%), Postives = 285/338 (84.32%), Query Frame = 0


Query: 19  MEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYSSTSSINDELPELVVFLQE 78
           MEKNKG VDDVESFKRRNCIVQESEDDPGESEASGDRMSRYSS SSINDELPELVVFLQE
Sbjct: 1   MEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYSS-SSINDELPELVVFLQE 60

Query: 79  TNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVAESDIKTTEESEDLESSIL 138
           TNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKS+V                   
Sbjct: 61  TNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNV------------------- 120

Query: 139 STDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPKLHLDRKVTGKRVAASSNS 198
                  VEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPKLHLDRKVTGKRVAASSNS
Sbjct: 121 -------VEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPKLHLDRKVTGKRVAASSNS 180

Query: 199 IAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGGGGRTSTAEDYAPENQTGR 258
           IAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGL PSGVGGGGRTSTA+DYAPENQTGR
Sbjct: 181 IAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLPPSGVGGGGRTSTAKDYAPENQTGR 240

Query: 259 YRSIYGFVYQRDDGSSEVDPAFNTLLLPHLLKLKH-IAYYLRLLEFTVYRQNGTEAQKEW 318
           YRSIYGFVYQRDD             + HL ++   IA+ L L +F  YRQNGTEAQKEW
Sbjct: 241 YRSIYGFVYQRDD-------------VTHLGRMTAPIAHILLLFQF--YRQNGTEAQKEW 296

Query: 319 RPLTRGKHEGCNCGGYVFPAAISEHLIAQPAQKIVEIR 355
           RPL+RGK EGCNCGGYVFPAAISEHLIAQPAQKIVEIR
Sbjct: 301 RPLSRGKREGCNCGGYVFPAAISEHLIAQPAQKIVEIR 296

[Close]

BLAST of Cp4.1LG04g14450 vs. NCBI nr
Match: KAE8652447.1 (hypothetical protein Csa_014115 [Cucumis sativus])

HSP 1 Score: 343 bits (879), Expect = 3.41e-113
Identity = 210/368 (57.07%), Postives = 245/368 (66.58%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVV+NM KS  +EKNK KVDD+E FKRRN +VQES+  P ESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  STSS----INDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120
           S SS    I DELPELVVFLQETNYEFVKDICID+A TS E+CFEE+C T+N +VPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 SDVAESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKK 180
            +  E+D ++TEES D ES+I STDSTQ ++KN  N+V E QKF  DA D++PS+  +KK
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKNF-NEVYEKQKFHSDAIDEVPSEVPHKK 180

Query: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPS 240
           SVPKL LDRKVTGK+ A+S+NSIAISL KILDENK KGK VA SN EHG++  +SGLS S
Sbjct: 181 SVPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQS 240

Query: 241 GVGGGGRTSTA-----------EDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLL 300
            V GG    TA           E Y PEN+TG Y             SS    A      
Sbjct: 241 TVEGGSSNWTAGCGHCRDCTMAEYYTPENETGLY-------------SSHCSSA------ 300

Query: 301 PHLLKLKHIAYYLRLLEFTVYRQNGTEAQKEWRPLTRGKHEGCNCGGYVFPAAISEHLIA 353
                              V +QNG E QK W+ L R KHEG N G YVFPA ISE L+A
Sbjct: 301 -------------------VCQQNGMEVQKGWQKLIRCKHEGGNYGDYVFPAVISEPLVA 329

[Close]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL
Match: A0A6J1F648 (uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC111441174 PE=4 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 4.90e-188
Identity = 275/286 (96.15%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVVNNMCKSPSMEKNKG VDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           S SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKS+VA
Sbjct: 61  S-SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
           ESDI+TTEESED+ESSI+STDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK
Sbjct: 121 ESDIETTEESEDVESSIMSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240
           LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNE GNVFHDSGL PSGVGG
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNERGNVFHDSGLPPSGVGG 240

Query: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLP 286
           GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNT+  P
Sbjct: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRP 285

[Close]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL
Match: A0A6J1HZT3 (uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138 PE=4 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 2.93e-187
Identity = 273/286 (95.45%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKS+VA
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
            SDI+TTEESED+ESSILSTDSTQVVEKNLLNKVNENQKFCYDAKD+IPSDFSNKKSVPK
Sbjct: 121 ASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKKSVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPSGVGG 240
           LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN EHGNVF +SGLSPSGVGG
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNIEHGNVFRNSGLSPSGVGG 240

Query: 241 GGRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLP 286
            GRTSTA+DYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNT+  P
Sbjct: 241 SGRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRP 286

[Close]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL
Match: A0A5A7UV29 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003210 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 9.92e-111
Identity = 212/364 (58.24%), Postives = 247/364 (67.86%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVV+NM KS  +EKNK KVDD+E FKRRN +VQE +  P ESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  STSS----INDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120
           S SS    I DELPELVVFLQETNYEFVKDICID+A TS ++CF+E+C T+N +VPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 SDVAESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKK 180
            +  E+D ++TEES D +S+I S +STQ +E+N  N+V E QK   DA D +PS+   KK
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEENF-NEVYEKQKVHSDAID-VPSEVPRKK 180

Query: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPS 240
           SVPKL LDRKVTGK+ A+S+NSIAISL KILDEN+ KGK VA SN EHG  F +SGLS S
Sbjct: 181 SVPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNIEHGKNFCNSGLSQS 240

Query: 241 GVGGGGRTSTA-------------EDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTL 300
            + GG    TA             +DY PEN+TG Y S           SS VD  F  +
Sbjct: 241 TIEGGSSNWTAGCGHCHDCTMAEYKDYTPENETGLYSSHC---------SSAVD-LFGRI 300

Query: 301 LLPHLLKLKHIAYYLRLLEFTVYRQNGTEAQKEWRPLTRGKHEGCNCGGYVFPAAISEHL 347
             P      HI     LL F   +QNG E QK W+ L R KHEG NCG YVFPA ISE L
Sbjct: 301 AAP----TAHI-----LLLFQFCQQNGMEVQKGWQKLIRCKHEGGNCGDYVFPAVISEPL 343

[Close]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL
Match: A0A6J1C133 (uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007481 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 1.71e-109
Identity = 192/300 (64.00%), Postives = 229/300 (76.33%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           M NEFS LVV+N+ KS   EKNK KVD VESF+RR+ +VQES+D  GESE SGD  SR+S
Sbjct: 1   MMNEFSSLVVDNLQKSRFTEKNKWKVDGVESFRRRSYMVQESDDGLGESEPSGDGRSRFS 60

Query: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK ++A
Sbjct: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120

Query: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180
            SD   TEESEDLESSI S +S QV+EK+  NKVNE +K  YD  D++PSD   KK+VPK
Sbjct: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180

Query: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN--NEHGNVFHDSGLSPSGV 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN  +EHG+++ +S LS S +
Sbjct: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240

Query: 241 GGG----------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTLLLPHL 288
            GG          G TS  E+YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN +  P L
Sbjct: 241 RGGASSCGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 299

[Close]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL
Match: A0A5D3BGS8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00110 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.78e-108
Identity = 211/372 (56.72%), Postives = 247/372 (66.40%), Query Frame = 0


Query: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60
           MRNEFSDLVV+NM KS  +EKNK KVDD+E FKRRN +VQE +  P ESEASGDRMSRYS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  STSS----INDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120
           S SS    I DELPELVVFLQETNYEFVKDICID+A TS ++CF+E+C T+N +VPCMLK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 SDVAESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKK 180
            +  E+D ++TEES D +S+I S +STQ +E+N  N+V E QK   DA D +PS+   KK
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEENF-NEVYEKQKVHSDAID-VPSEVPRKK 180

Query: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPS 240
           SVPKL LDRKVTGK+ A+S+NSIAISL KILDEN+ KGK VA SN EHG  F +SGLS S
Sbjct: 181 SVPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNIEHGKNFRNSGLSQS 240

Query: 241 GVGGGGRTSTA-------------EDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTL 300
            + GG    TA             +DY PEN+TG Y S           SS VD  F  +
Sbjct: 241 TIEGGSSNWTAGCGHCHDCTMAEYKDYTPENETGLYSSHC---------SSAVD-LFGRI 300

Query: 301 LLPHLLKLKHIAYYLRLLEFTVYRQNGTEAQKEWRPLTRGKHEGCNCGGYVFPAAISEHL 355
             P      HI     LL F   +QNG E QK W+ L R KHEG N G YV PA ISE L
Sbjct: 301 AAP----TAHI-----LLLFQFCQQNGMEVQKGWQKLIRCKHEGGNYGDYVCPAVISEPL 351

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g14450 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g14450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531769.1	3.64e-195	98.95	uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo]	[more]
XP_022933900.1	1.01e-187	96.15	uncharacterized protein LOC111441174 [Cucurbita moschata] >KAG7021566.1 hypothet...	[more]
XP_022969028.1	6.05e-187	95.45	uncharacterized protein LOC111468138 [Cucurbita maxima]	[more]
KAG6587606.1	3.07e-180	81.95	hypothetical protein SDJN03_16171, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8652447.1	3.41e-113	57.07	hypothetical protein Csa_014115 [Cucumis sativus]	[more]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F648	4.90e-188	96.15	uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A6J1HZT3	2.93e-187	95.45	uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138...	[more]
A0A5A7UV29	9.92e-111	58.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A6J1C133	1.71e-109	64.00	uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3BGS8	1.78e-108	56.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cp4.1LG04g14450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..63
None	No IPR available	PANTHER	PTHR33914:SF4	SUBFAMILY NOT NAMED	coord: 2..213
IPR040378	Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE	PANTHER	PTHR33914	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN	coord: 2..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g14450.1	Cp4.1LG04g14450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009786	regulation of asymmetric cell division