Cp4.1LG04g14140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g14140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Calcium-binding protein CML15
Location	Cp4.1LG04: 11401670 .. 11402152 (+)
RNA-Seq Expression	Cp4.1LG04g14140
Synteny	Cp4.1LG04g14140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCACTCGCAGTTGAGCAGCTTAATCAATTGCGCGACATTTTTGCACGATTCGATATGGATTCCGATGGAAGTCTCACGATTCTGGAACTGGCGGCATTGCTCCGATCTCTCGGTCTCAAGCCCTCCGGCGACCAAATCCACGTTCTCGTCGCTAATATGGATGCGAACGGTAATGGCTCTGTAGAGTTCGACGAATTGGTAACTGCGATTAGGCCGGATTTCAACGAGGAGATAATGGTAAATCAGACGCATCTTCTGGAGGTTTTTCGTTCGTTCGATCGAGACGGCAACGGATATATAACCGCGGCGGAGCTGGCAGGCTCGATGGCGAAGATGGGACAGCCATTGACGTACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGACGGCGTTATTAGCTTCAATGAATTCGCCTCTATAATGGCGAAATCGGCATCTGATTTTCTAGGGCTTGCAATCTCTTGA

mRNA sequence

ATGGCTGCACTCGCAGTTGAGCAGCTTAATCAATTGCGCGACATTTTTGCACGATTCGATATGGATTCCGATGGAAGTCTCACGATTCTGGAACTGGCGGCATTGCTCCGATCTCTCGGTCTCAAGCCCTCCGGCGACCAAATCCACGTTCTCGTCGCTAATATGGATGCGAACGGTAATGGCTCTGTAGAGTTCGACGAATTGGTAACTGCGATTAGGCCGGATTTCAACGAGGAGATAATGGTAAATCAGACGCATCTTCTGGAGGTTTTTCGTTCGTTCGATCGAGACGGCAACGGATATATAACCGCGGCGGAGCTGGCAGGCTCGATGGCGAAGATGGGACAGCCATTGACGTACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGACGGCGTTATTAGCTTCAATGAATTCGCCTCTATAATGGCGAAATCGGCATCTGATTTTCTAGGGCTTGCAATCTCTTGA

Coding sequence (CDS)

ATGGCTGCACTCGCAGTTGAGCAGCTTAATCAATTGCGCGACATTTTTGCACGATTCGATATGGATTCCGATGGAAGTCTCACGATTCTGGAACTGGCGGCATTGCTCCGATCTCTCGGTCTCAAGCCCTCCGGCGACCAAATCCACGTTCTCGTCGCTAATATGGATGCGAACGGTAATGGCTCTGTAGAGTTCGACGAATTGGTAACTGCGATTAGGCCGGATTTCAACGAGGAGATAATGGTAAATCAGACGCATCTTCTGGAGGTTTTTCGTTCGTTCGATCGAGACGGCAACGGATATATAACCGCGGCGGAGCTGGCAGGCTCGATGGCGAAGATGGGACAGCCATTGACGTACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGACGGCGTTATTAGCTTCAATGAATTCGCCTCTATAATGGCGAAATCGGCATCTGATTTTCTAGGGCTTGCAATCTCTTGA

Protein sequence

MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS

Homology

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.7e-64
Identity = 120/154 (77.92%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFD 66
           +Q+ QL+DIF RFDMD+DGSLTILELAALLRSLGLKPSGDQIHVL+A+MD+NGNG VEFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV  I PD NEE+++N   LLE+F+SFDRDGNG+I+AAELAG+MAKMGQPLTY+ELTEM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 161
           +KEADT+GDGVISF EFASIMAKSA D+ GL I+
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGLKIN 156

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 3.2e-62
Identity = 120/154 (77.92%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFD 66
           +Q+ QL+DIFARFDMD DGSLT LELAALLRSLG+KP GDQI +L+  +D NGNGSVEFD
Sbjct: 8   DQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNGNGSVEFD 67

Query: 67  ELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV AI PD NEE+++NQ  L+EVFRSFDRDGNG ITAAELAGSMAKMG PLTYRELTEM
Sbjct: 68  ELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEM 127

Query: 127 MKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 161
           M EAD++GDGVISFNEF+ IMAKSA+DFLGL  S
Sbjct: 128 MTEADSNGDGVISFNEFSHIMAKSAADFLGLTAS 161

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-55
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 8   QLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFDE 67
           QL QLR++F RFDM+ DGSLT LELAALLRSLGL+P+GD++H L+A MDANGNGSVEFDE
Sbjct: 22  QLKQLRELFRRFDMNGDGSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSVEFDE 81

Query: 68  LVTAIRPDFNEEI-MVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 127
           L  AI P    +  +V+Q  LLEVFR+FDRDGNG+I+AAELA SMA++GQPLT+ ELT M
Sbjct: 82  LAAAIAPVLTTQTHLVDQAQLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEELTRM 141

Query: 128 MKEADTDGDGVISFNEFASIMAKSASDFLGLA 159
           M++ADTDGDGVISF EFA++MAKSA DFLG+A
Sbjct: 142 MRDADTDGDGVISFKEFAAVMAKSALDFLGVA 173

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot
Match: Q5ZD81 (Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-50
Identity = 105/162 (64.81%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKP-SGDQIHVLVANMDANGN 61
           A L  EQL QL +IF RFD+D DGSLT LELAALLRSLGL+P +GD+IH L+A +DA+GN
Sbjct: 86  ARLRGEQLRQLHEIFLRFDLDGDGSLTKLELAALLRSLGLRPAAGDEIHALIAAIDADGN 145

Query: 62  GSVEFDELVTA----IRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQ 121
           G+VEFDEL ++    I       + V+Q  L E FR+FDRDGNG+I+AAELA SMA+MG 
Sbjct: 146 GTVEFDELASSLADLILGPCRPSVAVDQAELAEAFRAFDRDGNGFISAAELARSMARMGH 205

Query: 122 PLTYRELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLA 159
           P+ Y ELT+MM+EADTDGDG+ISF EF +IMAKSA DFLGLA
Sbjct: 206 PICYAELTDMMREADTDGDGLISFEEFTAIMAKSALDFLGLA 247

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot
Match: Q9M8U1 (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38
Identity = 86/152 (56.58%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNG 61
           A L  EQL +LR+IF  FD + DGSLT LEL +LLRSLGLKPS DQ+  L+   D N NG
Sbjct: 11  AKLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNG 70

Query: 62  SVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYR 121
            VEF E V  + PD   +       L  +FR FDRDGNGYITAAELA SMAK+G  LT  
Sbjct: 71  LVEFSEFVALVEPDL-VKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAE 130

Query: 122 ELTEMMKEADTDGDGVISFNEFASIMAKSASD 154
           ELT M+KEAD DGDG I F EF   +  +A D
Sbjct: 131 ELTGMIKEADRDGDGCIDFQEFVQAITSAAFD 161

[Close]

BLAST of Cp4.1LG04g14140 vs. NCBI nr
Match: XP_022933477.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023006598.1 probable calcium-binding protein CML15 [Cucurbita maxima] >XP_023529563.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo] >KAG6587636.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309 bits (791), Expect = 8.53e-106
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. NCBI nr
Match: XP_022135250.1 (probable calcium-binding protein CML15 [Momordica charantia])

HSP 1 Score: 301 bits (771), Expect = 9.57e-103
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. NCBI nr
Match: XP_022921807.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023516651.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301 bits (771), Expect = 9.57e-103
Identity = 154/160 (96.25%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of Cp4.1LG04g14140 vs. NCBI nr
Match: XP_004138337.2 (probable calcium-binding protein CML15 [Cucumis sativus] >XP_031741380.1 probable calcium-binding protein CML15 [Cucumis sativus])

HSP 1 Score: 299 bits (766), Expect = 5.54e-102
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMD+NGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDSNGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSA+DFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSAADFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. NCBI nr
Match: XP_008453344.1 (PREDICTED: probable calcium-binding protein CML15 [Cucumis melo] >KAA0058039.1 putative calcium-binding protein CML15 [Cucumis melo var. makuwa] >TYK28384.1 putative calcium-binding protein CML15 [Cucumis melo var. makuwa])

HSP 1 Score: 299 bits (766), Expect = 5.54e-102
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMD+NGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDSNGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTRLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSA+DFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSAADFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL
Match: A0A6J1L5D2 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111499274 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 4.13e-106
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL
Match: A0A6J1EZV6 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111440882 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 4.13e-106
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL
Match: A0A6J1C0M6 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111007259 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 4.63e-103
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL
Match: A0A6J1E1G5 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111429950 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 4.63e-103
Identity = 154/160 (96.25%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL
Match: A0A5D3DXV7 (Putative calcium-binding protein CML15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00110 PE=4 SV=1)

HSP 1 Score: 299 bits (766), Expect = 2.68e-102
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMD+NGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDSNGN 60

Query: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTRLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160
           RELTEMMKEADTDGDGVISFNEFAS+MAKSA+DFLGLAIS
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSAADFLGLAIS 160

[Close]

BLAST of Cp4.1LG04g14140 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-65
Identity = 120/154 (77.92%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFD 66
           +Q+ QL+DIF RFDMD+DGSLTILELAALLRSLGLKPSGDQIHVL+A+MD+NGNG VEFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV  I PD NEE+++N   LLE+F+SFDRDGNG+I+AAELAG+MAKMGQPLTY+ELTEM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 161
           +KEADT+GDGVISF EFASIMAKSA D+ GL I+
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGLKIN 156

[Close]

BLAST of Cp4.1LG04g14140 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63
Identity = 120/154 (77.92%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFD 66
           +Q+ QL+DIFARFDMD DGSLT LELAALLRSLG+KP GDQI +L+  +D NGNGSVEFD
Sbjct: 8   DQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNGNGSVEFD 67

Query: 67  ELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV AI PD NEE+++NQ  L+EVFRSFDRDGNG ITAAELAGSMAKMG PLTYRELTEM
Sbjct: 68  ELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEM 127

Query: 127 MKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 161
           M EAD++GDGVISFNEF+ IMAKSA+DFLGL  S
Sbjct: 128 MTEADSNGDGVISFNEFSHIMAKSAADFLGLTAS 161

[Close]

BLAST of Cp4.1LG04g14140 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39
Identity = 86/152 (56.58%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNG 61
           A L  EQL +LR+IF  FD + DGSLT LEL +LLRSLGLKPS DQ+  L+   D N NG
Sbjct: 11  AKLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNG 70

Query: 62  SVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYR 121
            VEF E V  + PD   +       L  +FR FDRDGNGYITAAELA SMAK+G  LT  
Sbjct: 71  LVEFSEFVALVEPDL-VKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAE 130

Query: 122 ELTEMMKEADTDGDGVISFNEFASIMAKSASD 154
           ELT M+KEAD DGDG I F EF   +  +A D
Sbjct: 131 ELTGMIKEADRDGDGCIDFQEFVQAITSAAFD 161

[Close]

BLAST of Cp4.1LG04g14140 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 80/151 (52.98%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGSVEFD 66
           EQ+N+LR+IF  FD + DGSLT LEL +LLR+LG+KPS DQ   L+   D   NG VEF 
Sbjct: 12  EQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLVEFP 71

Query: 67  ELVTAIRPDF----NEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRE 126
           E V  + P+            +  LL +FR FD DGNG+ITAAELA SMAK+G  LT  E
Sbjct: 72  EFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAE 131

Query: 127 LTEMMKEADTDGDGVISFNEFASIMAKSASD 154
           LT M+KEAD+DGDG I+F EFA  +  +A D
Sbjct: 132 LTGMIKEADSDGDGRINFQEFAKAINSAAFD 162

[Close]

BLAST of Cp4.1LG04g14140 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 118.2 bits (295), Expect = 5.9e-27
Identity = 55/145 (37.93%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 3   ALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGNGS 62
           AL  +Q+ + ++ F  FD D DG +T+ ELA ++RSL   P+  ++H ++  +D++ NG+
Sbjct: 5   ALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGT 64

Query: 63  VEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRE 122
           +EF E +  +     E     +  L E F+ FD+D NGYI+A+EL+  M  +G+ LT  E
Sbjct: 65  IEFAEFLNLMAKKLQESDA--EEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEE 124

Query: 123 LTEMMKEADTDGDGVISFNEFASIM 148
           + +M+KEAD DGDG ++++EF  +M
Sbjct: 125 VEQMIKEADLDGDGQVNYDEFVKMM 147

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g14140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ75	7.7e-64	77.92	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]
Q9LI84	3.2e-62	77.92	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]
Q6L5F4	2.9e-55	71.05	Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5ZD81	4.8e-50	64.81	Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9M8U1	4.2e-38	56.58	Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 ...	[more]

BLAST of Cp4.1LG04g14140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933477.1	8.53e-106	100.00	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023006598.1 prob...	[more]
XP_022135250.1	9.57e-103	96.88	probable calcium-binding protein CML15 [Momordica charantia]	[more]
XP_022921807.1	9.57e-103	96.25	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023516651.1 prob...	[more]
XP_004138337.2	5.54e-102	95.63	probable calcium-binding protein CML15 [Cucumis sativus] >XP_031741380.1 probabl...	[more]
XP_008453344.1	5.54e-102	95.63	PREDICTED: probable calcium-binding protein CML15 [Cucumis melo] >KAA0058039.1 p...	[more]

BLAST of Cp4.1LG04g14140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L5D2	4.13e-106	100.00	probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114992...	[more]
A0A6J1EZV6	4.13e-106	100.00	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1C0M6	4.63e-103	96.88	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1E1G5	4.63e-103	96.25	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A5D3DXV7	2.68e-102	95.63	Putative calcium-binding protein CML15 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Cp4.1LG04g14140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18530.1	5.5e-65	77.92	EF hand calcium-binding protein family	[more]
AT3G25600.1	2.3e-63	77.92	Calcium-binding EF-hand family protein	[more]
AT3G03000.1	3.0e-39	56.58	EF hand calcium-binding protein family	[more]
AT1G32250.1	1.1e-36	52.98	Calcium-binding EF-hand family protein	[more]
AT4G14640.1	5.9e-27	37.93	calmodulin 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 11..39 e-value: 0.046 score: 22.9 coord: 86..114 e-value: 0.001 score: 28.4 coord: 122..150 e-value: 5.9E-8 score: 42.4 coord: 47..75 e-value: 2.6 score: 14.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 10..72 e-value: 4.8E-11 score: 42.9 coord: 86..147 e-value: 4.2E-15 score: 56.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 118..153 score: 14.06708
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 7..42 score: 13.481276
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 43..78 score: 9.548024
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 82..117 score: 13.927603
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 86..148 e-value: 4.2781E-19 score: 74.1213
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 11..73 e-value: 1.40185E-12 score: 57.5577
None	No IPR available	GENE3D	1.10.238.10		coord: 2..76 e-value: 2.3E-17 score: 65.5
None	No IPR available	GENE3D	1.10.238.10		coord: 77..158 e-value: 8.6E-24 score: 85.6
None	No IPR available	PANTHER	PTHR23050:SF351	CALCIUM-BINDING PROTEIN CML15-RELATED	coord: 3..159
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 3..159
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 131..143
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 56..68
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 20..32
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 95..107
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 4..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g14140.1	Cp4.1LG04g14140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030234	enzyme regulator activity