Cp4.1LG04g13340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g13340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	60S ribosomal protein L7-2-like
Location	Cp4.1LG04: 10926898 .. 10929182 (+)
RNA-Seq Expression	Cp4.1LG04g13340
Synteny	Cp4.1LG04g13340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCGGTGTTTTTTTTGATATCTTGTTGTTATGTTTTTTTTTTGTTTTGTATTTGAGTTGGAAGTGTTAGGGTTTCGATCTTACTGTATTTTCTTTCTCTTTGCTGCACTACCGGTTACAGATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGCAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCGGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAATATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCTGAGGCCAAACTTCTGTTTATCATCAGGATCCGAGGGTGAGTGATTTGGTTCGGAAGACCTTTTTTGATTACTTGCTTGAATCCTGTTGTATCTGTCTTTATTTTATGTATTGTTTTTGGATTTTCAGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGGTAACGAGTTTATCCATTGATTTCATCTCACACAAAAAGGGTTTGCAGAGACTGTCTTCATATATATTCCTTTTGCAATTGGTTCTTTCTATCTTTTGCATGGACTGTTTTTATACAACCTATGAAATTGGATTAACTAATAACCTGCAGAGTTGATTTGACCTATGCCCTGACCACTTTCCCTGTCTGAGGTATTTGAAAGTTTCTGAGTTAGGCGAGTAATTTTAGTAGGAATACGAGTATGAAAGAACAATAGGTTTCTTTGCCTTTTTGCCATTTAATAACTGGTTGAAACTGATATTTGTTTCCATTATGAGTCATTGTTCTGTTATGGAATTCTTTTAGGTATTGTACTTCTCGAATGATTGTCTAAATGTTAACTGGTGAAGAAGATTGTGCTATTTCATGATGTTTGGAGTGCTGGCAATTATATTCACCCGTTCCGTTGGCATGTTACGTAATGGTTTGCATTTGTGTTTTTTTACTTTCAGCTCACTCTGTGTATCATATCAATGCATTGTTTAAACATTTTGATGTTGAATCTAGTTTGTTATTGTTGTTTTATTTTGTTTCTTCCAATGCACCTAGGAATGTTTATCTCGCATCTGTTTTGCTTTGTTTTGTACCTCACTCCTTGCTTACCAACCCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGGTATGCTTCACTTGGATTTCTTCTGTTTCTTCTTTTGATTATCTGAAGTTCATGATTAACTCATTGTTTTCCTGAACTGATACTTTCAGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCTTTGACTGACAACTCCATCATCGAGCAGGTTTGTTGCTCGGAGGAATTCTATATTAAGTTCTATGGAAGTATAGCAGTTTGAAGTACCAATTGTTATTCACAACGTTCCATCCTTTATAACTGGTGTTGGGTGTTTTGTTTGTTCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAAGATACTTTTGAGTTTGTTCGTGAGTTTCTGCTGGGCGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTCGTTTTTGGAATCTCAGAATGTTTTGGTATTTCATTAGTGTACTTCTATCTTCGGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATTAATCAGAGATTTTTCTAAAATTTCAGTTCTACCCGTTTCTAGTTGATGTCAGTAGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGGCTGAGATTTTCACTTCCCTTCTATCGTGAGGTGTCTACACGTCTTTTGTTGTCTGTAATGTATATTAGAGAGGGTAAATAATGGCTGTTGCAATTCATTCTCGGTACTTGAGATGTGAGAAGGTCGTCCTATTACGTCATTGGGGAGAGGTTTTCACACAAATGTTTCTTTCTCCTTCCCAATTACGGGATCTCACA

mRNA sequence

ATGAGTGCGTTGGAAGTGTTAGGGTTTCGATCTTACTGTATTTTCTTTCTCTTTGCTGCACTACCGGTTACAGATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGCAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCGGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAATATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCTGAGGCCAAACTTCTGTTTATCATCAGGATCCGAGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCTTTGACTGACAACTCCATCATCGAGCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAAGATACTTTTGAGTTTGTTCGTGAGTTTCTGCTGGGCGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTCGTTTTTGGAATCTCAGAATGTTTTGGTATTTCATTAGTGTACTTCTATCTTCGGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATTAATCAGAGATTTTTCTAAAATTTCAGTTCTACCCGTTTCTAGTTGATGTCAGTAGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGGCTGAGATTTTCACTTCCCTTCTATCGTGAGGTGTCTACACGTCTTTTGTTGTCTGTAATGTATATTAGAGAGGGTAAATAATGGCTGTTGCAATTCATTCTCGGTACTTGAGATGTGAGAAGGTCGTCCTATTACGTCATTGGGGAGAGGTTTTCACACAAATGTTTCTTTCTCCTTCCCAATTACGGGATCTCACA

Coding sequence (CDS)

ATGAGTGCGTTGGAAGTGTTAGGGTTTCGATCTTACTGTATTTTCTTTCTCTTTGCTGCACTACCGGTTACAGATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGCAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCGGCGAAGAAGAAGAATGCTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAATATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTACGTAGATCCTGAGGCCAAACTTCTGTTTATCATCAGGATCCGAGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCTTTGACTGACAACTCCATCATCGAGCAGGCTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAA

Protein sequence

MSALEVLGFRSYCIFFLFAALPVTDMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Homology

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BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 2.9e-116
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

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BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-115
Identity = 208/241 (86.31%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 31  VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 90
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 91  LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 150
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 151 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICA 210
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R  LTDNSI+EQALGK GIIC 
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 211 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 270
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 271 N 272
           N
Sbjct: 242 N 242

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BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-111
Identity = 202/236 (85.59%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKK KR EEWALA+K    AAKKK+ E RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R  LTDNSI++QALGK GIIC EDLIH
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIH 186

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 187 EIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

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BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot
Match: Q58DT1 (60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.6e-80
Identity = 149/245 (60.82%), Postives = 182/245 (74.29%), Query Frame = 0


Query: 27  SSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDE 86
           + E  K  P VPE++ KKRK   E  +   +   A K      RKLI+ +AK Y KEY +
Sbjct: 4   AEEKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQ 63

Query: 87  QQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 146
             +  +R+ R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+
Sbjct: 64  MYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFV 123

Query: 147 KVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFG 206
           K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R  LTDN++I ++LGK+G
Sbjct: 124 KLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYG 183

Query: 207 IICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINEL 266
           IIC EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN L
Sbjct: 184 IICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRL 243

Query: 267 IRRMN 272
           IRRMN
Sbjct: 244 IRRMN 248

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BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot
Match: P14148 (60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 9.9e-80
Identity = 148/237 (62.45%), Postives = 179/237 (75.53%), Query Frame = 0


Query: 35  PVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRL 94
           P VPE++ KKR+   E  +   +   A K      RKLI+ +AK Y KEY +  +  +R+
Sbjct: 34  PAVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRM 93

Query: 95  KREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLN 154
            R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++N
Sbjct: 94  ARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASIN 153

Query: 155 MLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLI 214
           ML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R  LTDNS+I ++LGKFGIIC EDLI
Sbjct: 154 MLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLI 213

Query: 215 HEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           HEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Sbjct: 214 HEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

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BLAST of Cp4.1LG04g13340 vs. NCBI nr
Match: KAG7021690.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519 bits (1336), Expect = 2.50e-185
Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 9   FRSYCIFFLFAALPVTDMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAE 68
           FRSYCIFFLFAALPVT MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAE
Sbjct: 1   FRSYCIFFLFAALPVTAMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAE 60

Query: 69  NRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKT 128
           NRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKT
Sbjct: 61  NRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKT 120

Query: 129 KKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKR 188
           KKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKR
Sbjct: 121 KKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKR 180

Query: 189 RTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRN 248
           RTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRN
Sbjct: 181 RTPLTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRN 240

Query: 249 HYVEGGDAGNRENYINELIRRMN 271
           HYVEGGDAGNRENYINELIRRMN
Sbjct: 241 HYVEGGDAGNRENYINELIRRMN 263

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BLAST of Cp4.1LG04g13340 vs. NCBI nr
Match: XP_022931467.1 (60S ribosomal protein L7-2-like [Cucurbita moschata] >XP_023530909.1 60S ribosomal protein L7-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487 bits (1254), Expect = 4.24e-173
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

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BLAST of Cp4.1LG04g13340 vs. NCBI nr
Match: XP_022974403.1 (60S ribosomal protein L7-4-like [Cucurbita maxima])

HSP 1 Score: 484 bits (1246), Expect = 7.02e-172
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKN ENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQ LGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

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BLAST of Cp4.1LG04g13340 vs. NCBI nr
Match: XP_038880671.1 (60S ribosomal protein L7-2 [Benincasa hispida])

HSP 1 Score: 478 bits (1229), Expect = 2.74e-169
Identity = 239/246 (97.15%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKNAENRKLI+NRAKLYAKEYD
Sbjct: 1   MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKEL+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEI+TVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. NCBI nr
Match: KAG6587726.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490 bits (1261), Expect = 9.51e-168
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 24  TDMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE 83
           T+MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE
Sbjct: 430 TNMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKE 489

Query: 84  YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNG 143
           YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNG
Sbjct: 490 YDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNG 549

Query: 144 VFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALG 203
           VFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALG
Sbjct: 550 VFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALG 609

Query: 204 KFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYI 263
           KFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYI
Sbjct: 610 KFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYI 669

Query: 264 NELIRRMN 271
           NELIRRMN
Sbjct: 670 NELIRRMN 677

[Close]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL
Match: A0A6J1ETP4 (60S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE=3 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 2.05e-173
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL
Match: A0A6J1IG46 (60S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 3.40e-172
Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKN ENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQ LGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL
Match: A0A6J1E1W3 (60S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV=1)

HSP 1 Score: 473 bits (1218), Expect = 6.30e-168
Identity = 240/246 (97.56%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKKGL AAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKPNPVVPESVLKKRKRNEEWALAEKKGLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIIC EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL
Match: A0A5A7U6V9 (60S ribosomal protein L7-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001640 PE=3 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 1.27e-167
Identity = 235/246 (95.53%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MS +GVKGGPVVPESVLKKRKRN+EWALAEK+GLEAAKKKNAENRKLI+NRAKLYAKEYD
Sbjct: 1   MSGDGVKGGPVVPESVLKKRKRNDEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKEL++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKT+KILQLLRLRQIFNGVF
Sbjct: 61  EQQKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIICAEDLIHEI+TVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL
Match: A0A6J1JDW2 (60S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 3.64e-167
Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 26  MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 85
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKK L AAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKANPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 86  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 145
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 146 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 205
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 206 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 265
           GIIC EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 266 LIRRMN 271
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]

BLAST of Cp4.1LG04g13340 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of Cp4.1LG04g13340 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of Cp4.1LG04g13340 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKKRKR EEWALA+K+ LEAAKK+NAE RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++Q LGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of Cp4.1LG04g13340 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-116
Identity = 208/241 (86.31%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 31  VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 90
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 91  LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 150
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 151 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICA 210
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R  LTDNSI+EQALGK GIIC 
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 211 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 270
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 271 N 272
           N
Sbjct: 242 N 242

[Close]

BLAST of Cp4.1LG04g13340 vs. TAIR 10
Match: AT2G44120.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 403.3 bits (1035), Expect = 1.6e-112
Identity = 202/236 (85.59%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 36  VVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 95
           VVPESVLKK KR EEWALA+K    AAKKK+ E RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 96  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 155
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 156 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKFGIICAEDLIH 215
           L RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R  LTDNSI++QALGK GIIC EDLIH
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIH 186

Query: 216 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 272
           EI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 187 EIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHP1	2.9e-116	87.29	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
P60040	1.9e-115	86.31	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
P60039	2.2e-111	85.59	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q58DT1	7.6e-80	60.82	60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1	[more]
P14148	9.9e-80	62.45	60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2	[more]

BLAST of Cp4.1LG04g13340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021690.1	2.50e-185	99.62	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022931467.1	4.24e-173	100.00	60S ribosomal protein L7-2-like [Cucurbita moschata] >XP_023530909.1 60S ribosom...	[more]
XP_022974403.1	7.02e-172	99.19	60S ribosomal protein L7-4-like [Cucurbita maxima]	[more]
XP_038880671.1	2.74e-169	97.15	60S ribosomal protein L7-2 [Benincasa hispida]	[more]
KAG6587726.1	9.51e-168	99.60	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG04g13340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETP4	2.05e-173	100.00	60S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE...	[more]
A0A6J1IG46	3.40e-172	99.19	60S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3...	[more]
A0A6J1E1W3	6.30e-168	97.56	60S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV...	[more]
A0A5A7U6V9	1.27e-167	95.53	60S ribosomal protein L7-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1JDW2	3.64e-167	97.15	60S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g13340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13580.3	2.1e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.2	2.1e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.1	2.1e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	1.4e-116	86.31	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.1	1.6e-112	85.59	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..101
None	No IPR available	PANTHER	PTHR11524:SF47	60S RIBOSOMAL PROTEIN L7-RELATED	coord: 22..271
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 113..163 e-value: 9.0E-20 score: 70.3
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 112..271 e-value: 1.6E-33 score: 117.2
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 112..271
IPR005998	Ribosomal protein L7, eukaryotic	TIGRFAM	TIGR01310	TIGR01310	coord: 38..271 e-value: 5.0E-101 score: 335.1
IPR012988	Ribosomal protein L30, N-terminal	PFAM	PF08079	Ribosomal_L30_N	coord: 37..108 e-value: 7.2E-25 score: 87.0
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 22..271
IPR018038	Ribosomal protein L30, conserved site	PROSITE	PS00634	RIBOSOMAL_L30	coord: 131..163
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 112..271 e-value: 9.51827E-89 score: 258.611

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13340.1	Cp4.1LG04g13340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome