Cp4.1LG04g11410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTATGTTTGCATTTCTAGCTGGGTTCTGATTGTGCTTGCTGTCTTGATGAATTTGTTTGTGTCATTTCATTTATGGGTTTTGATTAATCCAAGATTTTCTACATGGGTTTTCGATTTTGGGGTTTTTTTCCCCTCATCTTGTGTGGATTTGTTGTAGCTCGATTCATTTTATGCTTGCTGATTCATTTCTATCGTGTTCTTGATTATCCGACGTTTTTGTGTTTGCATCGTTGTCTGATAATTGTTGTCAATCGTCAATCGTCAATCGTCAATTCCTATGTTGATGAATTTGCTTATGTCATTTCGTTTCTGGGTTTTGCTGGCTGTTTGCAATTGTTGTTATGAATTTGNCAACAAAGCATTCTTTATGAGACTGATAACGATATGTAACGGGTCAAAGCGGACAATTATGCTTTTGTTCGATATACCGTAAAAAGTACATTGATTTTAATAATGAAGCATCAACATGTAGCAATAAACATAAATGAAGTACAGACAGAAAGTAAGACATTAAAGCCTGCAGGATTTAGGTTGGGATGTCGTTATCGTGATGAGAAAACAAACCTTACGTGTTTGACGATGATCGTGACGAGACTACGAATGGTTTTAAATTGTGTAAATGGTTTAAAATTGTTGGATGGTTTGACGATGATCGAATTTTGTACTATTTCGACCGTTCTATCGATAACATTCCATGACTGCAGGAGTGCTGCTACCTTTGCCTTGGACCATCAGAATGAAAATTGCCTATGGTGCAGCAAAAGGACTGGCATTTCTACACGAAGCTGAAAAGCCCGTCATCTATCGTGATTTTAAGACGTCGAACATTCTGCTCGATTCGGTTGGTTTATTATTGCCTTTCTGTGTACATTTAAGAAGATTTTAGCTCACTCTCCCTATCACGAACGGTTCGGTTTGAATACTGACCGATCACTTTGGTTCAACACCAGGACTATAATCCAAAGCTTTCGGACTTCGGTCTCGCGAAAGATGGACCGGTTGGTGACAAATCCCACGTCTCGACTCGTATAATGGGAACATATGGATACGCTGCACCAGAGTATATATTGACAGGCACGAGTTCTTTCTTTGCCTTTTAG ATGGCTTATACAGAAAGTAAGACATTAAAGCCTGCAGGATTTAGGTTGGGATGTCGTTATCGTGATGAGAAAACAAACCTTACGTGTTTGACGATGATCGTGACGAGACTACGAATGGACTATAATCCAAAGCTTTCGGACTTCGGTCTCGCGAAAGATGGACCGGTTGGTGACAAATCCCACGTCTCGACTCGTATAATGGGAACATATGGATACGCTGCACCAGAGTATATATTGACAGGCACGAGTTCTTTCTTTGCCTTTTAG ATGGCTTATACAGAAAGTAAGACATTAAAGCCTGCAGGATTTAGGTTGGGATGTCGTTATCGTGATGAGAAAACAAACCTTACGTGTTTGACGATGATCGTGACGAGACTACGAATGGACTATAATCCAAAGCTTTCGGACTTCGGTCTCGCGAAAGATGGACCGGTTGGTGACAAATCCCACGTCTCGACTCGTATAATGGGAACATATGGATACGCTGCACCAGAGTATATATTGACAGGCACGAGTTCTTTCTTTGCCTTTTAG MAYTESKTLKPAGFRLGCRYRDEKTNLTCLTMIVTRLRMDYNPKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGTSSFFAF Homology
BLAST of Cp4.1LG04g11410 vs. ExPASy Swiss-Prot
Match: Q9FM85 (Probable serine/threonine-protein kinase PBL16 OS=Arabidopsis thaliana OX=3702 GN=PBL16 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.6e-18 Identity = 47/62 (75.81%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy Swiss-Prot
Match: P46573 (Probable serine/threonine-protein kinase PBL10 OS=Arabidopsis thaliana OX=3702 GN=PBL10 PE=1 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 2.5e-16 Identity = 43/62 (69.35%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy Swiss-Prot
Match: Q06548 (Probable serine/threonine-protein kinase PBL9 OS=Arabidopsis thaliana OX=3702 GN=PBL9 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.6e-16 Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy Swiss-Prot
Match: Q0WRY5 (Probable serine/threonine-protein kinase PBL7 OS=Arabidopsis thaliana OX=3702 GN=PBL7 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 9.5e-16 Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy Swiss-Prot
Match: Q65XV8 (Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-15 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. NCBI nr
Match: GAU18744.1 (hypothetical protein TSUD_80330 [Trifolium subterraneum]) HSP 1 Score: 91.7 bits (226), Expect = 4.47e-22 Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. NCBI nr
Match: XP_026427457.1 (probable serine/threonine-protein kinase PBL16 [Papaver somniferum]) HSP 1 Score: 95.9 bits (237), Expect = 8.67e-22 Identity = 48/62 (77.42%), Postives = 50/62 (80.65%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. NCBI nr
Match: XP_023530365.1 (probable serine/threonine-protein kinase PBL16 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.4 bits (233), Expect = 1.35e-21 Identity = 48/62 (77.42%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. NCBI nr
Match: KAA0055728.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 3.62e-21 Identity = 49/63 (77.78%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. NCBI nr
Match: TYK09978.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 3.65e-21 Identity = 49/63 (77.78%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy TrEMBL
Match: A0A2Z6LM84 (Protein kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_80330 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.17e-22 Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy TrEMBL
Match: A0A5A7UKY1 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001120 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.75e-21 Identity = 49/63 (77.78%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy TrEMBL
Match: A0A5D3CFH9 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001080 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.77e-21 Identity = 49/63 (77.78%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy TrEMBL
Match: A0A4Y7LD10 (Protein kinase domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_045658 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.81e-21 Identity = 48/62 (77.42%), Postives = 50/62 (80.65%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. ExPASy TrEMBL
Match: A0A4Y7KY07 (Protein kinase domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_002237 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.26e-21 Identity = 48/62 (77.42%), Postives = 50/62 (80.65%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. TAIR 10
Match: AT5G56460.1 (Protein kinase superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19 Identity = 47/62 (75.81%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. TAIR 10
Match: AT2G28930.1 (protein kinase 1B ) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17 Identity = 43/62 (69.35%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. TAIR 10
Match: AT2G28930.2 (protein kinase 1B ) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17 Identity = 43/62 (69.35%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. TAIR 10
Match: AT2G28930.3 (protein kinase 1B ) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17 Identity = 43/62 (69.35%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Cp4.1LG04g11410 vs. TAIR 10
Match: AT1G07570.2 (Protein kinase superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.0e-17 Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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