Cp4.1LG04g08660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGTTTTAAGATAAAGGTTATGTTTTATGGAATTTTAATGAAGTCTTCCGCATTCAATGTTTATGGTATGTATACAGTAGTGACCTTAAATTAAGTAGAAAATTCCAGGTCGTTACAAAACTGATGACATGGGCTCACATAGGTTGACTTGGATTTCAATGAGCTTTCATTAAGGATAACGACAGAACATCAGCCTAAGCTAACCAGGTAAGTGACCTTACTATCGGCATTGTTATATTTGATGTTGACACGTGCCCTGTGGTTCTGCACGTGTCATATATATCGATATATGTGAATAGTCTATGGATCGATATGCTTTCTATGTGTTATGTTATGTTATAATATGTGAATTGTATGATAATAATTACGGTACGATGTGTTCAAGGATATATTTGAGATAGGATACAAGAAAGATGCAAAAAACGAAATGTAACGATAGGAGTAAAATACGTTCATGAAACGTTAAGGTTAGGTTACATACCGGAGTGATATGGATAAGAGAGATTGATGGAAGAAAACGGTTAGGCTACGGGTAGAAAGGGATAGGTTTGTGATAGATTGATAGAACGATAGCGTTAGGTTAAGTTCTTGTGATGAGATGACTAAGGTACGTTCACGTAATGATATGTCTGTGATAGGTATAAGAACGTTAAGGCTATGATAAGTTAGAGAACAATATGACTATGAAGTGTTTACGTTATGACTCGTTTATGATATGATACATTGTGATGCAATATGTCATGGTATGATGTGTATATGATGAAATGTTATGTTAAAAGCATAGAACGTTATGTTAGGTCTCTTAAATTGTGTGTATACAACATGATATGAATGACATGAAATTACGATAAATGACATGAAGTATAACCCCGTTAGAATTATGTATGATTTGAGAACTGAAGAATGAGAAACGATATGACATGAATGATGAACGATATCTGAAACGATATGAAAAATGATATGATATGTACATAATGCTAGCGGGGTTGTATTAAAGGATAATGAAAATGGAAAAGTTTTGGGACCTCATGCATTATGTGTGCTCATGCATTTGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCTAATGACAGGACAACGATCGTTATGCTTTGCATAGCGCTGCCGTGACGGTTACTAGTTCTAGCGGGTGTCCGGCCTAAGGGGCTCCCAGAGTATGCCCACCGGATAAGGAAAGTGGCCTAGCGGTGTGCAAACTAGCTGGTGAGCCCATACTCGCACATATGGGCTGTGTATAGAGTATATGGTACACGTCCAAAATTTACCCGTTAGGACAGCACCGTAGGAAAAACGGAATGAAAGATAGGTCACATCATCTCATTGCATGTGATTGTTGCATTCAACCTCAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTGGTACATTTTTCAGGTTAAGGCAAGACATTTCTGTACGGCTGACGACGGCATCACAACTTGAGACTATGGCACATGCATAGGATAGTGGTATTTATTTTCTTAGACTTAGGCTAGAATATAATGTTTTTAGCTTAAACTCTTATTCATTTTATTTAGTCTTTTGTTGTGTCGTTTTAAAGATGATTTCGAAACACGTAAGTTCATGGCTGTGTTTTATGATAAAGATTATGTTTTATGGAATTTAAATGAAGTCTTCCGCATTCAATGTGTATGGCACGTATACAGTAGCGACCTTAAATTAAGCAGAAAATTTCGGGTCGTTACAAAAGAGAAGAGACAATTCATGCTATCAAAACTAGAGCTCAAAACTAGAGCTTAGTTATAGTCATCTCCATCCTAGTTTGAAGCCACGTTTTTTTTTATATTGTGCTTTATTTTCTAAAGATTATAATATTCAAAAGGATGCACTGATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATTTGACATAATTGAGCCATATGACATTGGTGAAGATCATTGTAACGACCTGGGAAAGAAAGAAAAAAAAATATATAATAATAAATAAATAAATAAGGGAAAACGAGAAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCATGTACGGTTGACGGTGGCATCGTGATCAGAGACTGTGACGCGTGCATAGGATAGTTGCATATTTAATTCCTAGTCTTGGTTAGGATCGGGCGTTTGCATTTCATTCATTTGTAATCGTTTTATTTTATCTTTTTGAACTCCAGCACGATGTTTGAAACACGTAAGTCCGGCAGTGTTTTCCAATGTTTTAATGTATTCTGAAGTTTTAAATTTTTCCGCTAATAAATACGAGCATGCTTAGATTTTTATTCTGCATTAGAGATGAGCATGAGACGTTAGTGACGACTTTAGATATGTGGAAATTTAGGGTCGTTACAATTATTTCATGGAATTATTATCAAAATCTTTCTTTTAAGACGTCACAAGAAATGAAGAGGGTGTAATAATAGAGTATAAGATGCATGACTTGATACATGATTTGCTTTTTTAATAGTGAAATAGGAATACATTTCTATGGATGTGAACGATAGCACCAACATTGACAGCACCCGACACATCTATATTTATCGTCCACTTGGTATAAAATTAGAATCCCTAAAATTATTGTTTGAGTCAAACAAGAAAAAAATAAATAATAAATAAGAACATTAATTATTGATGCTCCATGAAAGGATTGCCAAATAGTCCTTTAACTCAATCTCTTCCATGTTTTGCCACTAAGGACATTGCGTTTGAATTTCGGCTCGGCTGTTACTTTAAAAGTATTGCCAATATCTATTGGCAAAGTTGAAATGTAAGATATATCTGAAGATAGGTCTACATGAACTTCAATTTCTTCTTCTGAATTCTATAACTAAATTGTATAATTTGGAAACATTTGTCTTCAATGAGTGTATACGTTTACCAGAGTTGTGGAGAGATCTAAAAATTGGATGAAGCTTAGGTATTTAAGCTTTGCTAGAAATAGTGAAATAAAATATCTTCTGCAGCCTATTGCTGCATTGCACAATTTAAAAACACTTATCTTTCAAGGTTGTTTTCTATTAAAAGAATTGCCAAATATATTAAAAAATGTGTCAACCTTAAACATCTTGATTTATGTGATTGCAATGTTTTGACTCATATACCTAAAGGACTAGGTGAGCTTACTAGTCTTCAAACAACGAATTTATTTATACTAAAAAAAGATATTGGACGTTTGCACAATAGATGATTTAGTAAATAGTTCTTTTAACTTTCAATTGAGGTTGGGTGTTCAAGAATTAAAGTTTGTTCGGAACTATTCCGAAGATGAGCATATGAATATTATCTTGGACAAGGAGTGCAAAGGGGTTTTAAAATGCTTACAACCACATTCAAAGGTTCAAAAAATAGATATATACCAATATCGAAAAGTCAGACTATGTGATTGGCTATCCTCTATACCCTTCTTAACTTGGTCAACATAAAGCTTTCAAATTGCTTCAAATTGCAGGTTCTCCCACAATCTGATCAATTTACTTTTCTCAAGCATTTGAGTCTTAAATCAATACCGAATATTGATTACATTGATTACAATAAATATCCTTCTCCGACAATGTTTTTTCCATCCCTTAAGAAATTAAATTTAAAAGGAGGGTGGAATGGTGAAACTTCATCATAG ATGGCTATGATAACGACAGAACATCAGCCTAAGCTAACCAGTCTTTTGTTGTGTCGTTTTAAAGATGATTTCGAAACACATTATAATATTCAAAAGGATGCACTGATTAAGCAATGGGTGGCACAAGCCTATTGCTGCATTGCACAATTTAAAAACACTTATCTTTCAAGGTTGTTTTCTATTAAAAGAATTGCCAAATATATTAAAAAATGTGTCAACCTTAAACATCTTGATTTATGTGATTGCAATGTTTTGACTCATATACCTAAAGGACTAGGTGAGCTTACTAGTCTTCAAACAACGAATTTATTTATACTAAAAAAAGATATTGGACATGATTTAGTAAATAGTTCTTTTAACTTTCAATTGAGGTTGGGTGTTCAAGAATTAAAGTTTGTTCGGAACTATTCCGAAGATGAGCATATGAATATTATCTTGGACAAGGAGTGCAAAGGGGTTTTAAAATGCTTACAACCACATTCAAAGGTTCAAAAAATAGATATATACCAATATCGAAAAGTTCTCCCACAATCTGATCAATTTACTTTTCTCAAGCATTTGAGTCTTAAATCAATACCGAATATTGATTACATTGATTACAATAAATATCCTTCTCCGACAATGTTTTTTCCATCCCTTAAGAAATTAAATTTAAAAGGAGGGTGGAATGGTGAAACTTCATCATAG ATGGCTATGATAACGACAGAACATCAGCCTAAGCTAACCAGTCTTTTGTTGTGTCGTTTTAAAGATGATTTCGAAACACATTATAATATTCAAAAGGATGCACTGATTAAGCAATGGGTGGCACAAGCCTATTGCTGCATTGCACAATTTAAAAACACTTATCTTTCAAGGTTGTTTTCTATTAAAAGAATTGCCAAATATATTAAAAAATGTGTCAACCTTAAACATCTTGATTTATGTGATTGCAATGTTTTGACTCATATACCTAAAGGACTAGGTGAGCTTACTAGTCTTCAAACAACGAATTTATTTATACTAAAAAAAGATATTGGACATGATTTAGTAAATAGTTCTTTTAACTTTCAATTGAGGTTGGGTGTTCAAGAATTAAAGTTTGTTCGGAACTATTCCGAAGATGAGCATATGAATATTATCTTGGACAAGGAGTGCAAAGGGGTTTTAAAATGCTTACAACCACATTCAAAGGTTCAAAAAATAGATATATACCAATATCGAAAAGTTCTCCCACAATCTGATCAATTTACTTTTCTCAAGCATTTGAGTCTTAAATCAATACCGAATATTGATTACATTGATTACAATAAATATCCTTCTCCGACAATGTTTTTTCCATCCCTTAAGAAATTAAATTTAAAAGGAGGGTGGAATGGTGAAACTTCATCATAG MAMITTEHQPKLTSLLLCRFKDDFETHYNIQKDALIKQWVAQAYCCIAQFKNTYLSRLFSIKRIAKYIKKCVNLKHLDLCDCNVLTHIPKGLGELTSLQTTNLFILKKDIGHDLVNSSFNFQLRLGVQELKFVRNYSEDEHMNIILDKECKGVLKCLQPHSKVQKIDIYQYRKVLPQSDQFTFLKHLSLKSIPNIDYIDYNKYPSPTMFFPSLKKLNLKGGWNGETSS Homology
BLAST of Cp4.1LG04g08660 vs. NCBI nr
Match: XP_023539563.1 (uncharacterized protein LOC111800203 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216 bits (551), Expect = 1.37e-60 Identity = 120/226 (53.10%), Postives = 136/226 (60.18%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. NCBI nr
Match: XP_023547024.1 (disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547025.1 disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 210 bits (535), Expect = 6.25e-59 Identity = 132/283 (46.64%), Postives = 156/283 (55.12%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. NCBI nr
Match: XP_023547023.1 (disease resistance protein RGA2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 210 bits (535), Expect = 8.13e-59 Identity = 132/283 (46.64%), Postives = 156/283 (55.12%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. NCBI nr
Match: XP_022931674.1 (putative disease resistance protein RGA1 [Cucurbita moschata] >XP_022931675.1 putative disease resistance protein RGA1 [Cucurbita moschata]) HSP 1 Score: 209 bits (531), Expect = 5.47e-58 Identity = 118/227 (51.98%), Postives = 135/227 (59.47%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. NCBI nr
Match: XP_023528691.1 (putative disease resistance protein RGA1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205 bits (522), Expect = 4.33e-57 Identity = 115/227 (50.66%), Postives = 133/227 (58.59%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. ExPASy TrEMBL
Match: A0A6J1EUW9 (putative disease resistance protein RGA1 OS=Cucurbita moschata OX=3662 GN=LOC111437812 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 2.65e-58 Identity = 118/227 (51.98%), Postives = 135/227 (59.47%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. ExPASy TrEMBL
Match: A0A6J1FNX2 (putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111445964 PE=4 SV=1) HSP 1 Score: 196 bits (499), Expect = 5.92e-54 Identity = 111/223 (49.78%), Postives = 135/223 (60.54%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. ExPASy TrEMBL
Match: A0A0A0K5Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G425920 PE=4 SV=1) HSP 1 Score: 129 bits (325), Expect = 1.10e-30 Identity = 86/225 (38.22%), Postives = 110/225 (48.89%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. ExPASy TrEMBL
Match: A0A6J1DMC1 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111021883 PE=4 SV=1) HSP 1 Score: 125 bits (313), Expect = 4.56e-29 Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 0
BLAST of Cp4.1LG04g08660 vs. ExPASy TrEMBL
Match: A0A0A0K9P7 (Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G425940 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 1.88e-27 Identity = 83/227 (36.56%), Postives = 119/227 (52.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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