Cp4.1LG04g08590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g08590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein of unknown function (DUF3511)
LocationCp4.1LG04: 2564977 .. 2565255 (-)
RNA-Seq ExpressionCp4.1LG04g08590
SyntenyCp4.1LG04g08590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA

mRNA sequence

ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA

Coding sequence (CDS)

ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA

Protein sequence

MEAGRRRSAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF
Homology
BLAST of Cp4.1LG04g08590 vs. NCBI nr
Match: KAG6588612.1 (hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177 bits (448), Expect = 1.15e-55
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MEAGRRRSAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAK 60
          MEAGRRRSAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAK
Sbjct: 1  MEAGRRRSAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAK 60

Query: 61 YKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
          YKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF
Sbjct: 61 YKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92

BLAST of Cp4.1LG04g08590 vs. NCBI nr
Match: KAG6588594.1 (hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020542.1 hypothetical protein SDJN02_17228, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172 bits (436), Expect = 8.02e-54
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0

Query: 1  MEAGRRRSAAAA-GGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVA 60
          MEAGRRRSAAAA GGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVA
Sbjct: 1  MEAGRRRSAAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVA 60

Query: 61 KYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
          KYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF
Sbjct: 61 KYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 93

BLAST of Cp4.1LG04g08590 vs. NCBI nr
Match: XP_013450451.1 (uncharacterized protein LOC25499646 [Medicago truncatula] >KEH24479.1 DUF3511 domain protein [Medicago truncatula] >RHN49176.1 hypothetical protein MtrunA17_Chr7g0271701 [Medicago truncatula])

HSP 1 Score: 77.0 bits (188), Expect = 1.02e-15
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 15  RSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSI 74
           R    V + ET++ER      VV+ KKS+  WW   E KRKRRVA+YKFY  EGKLKRS+
Sbjct: 51  RERSVVKNYETLRERS-----VVKKKKSMS-WWNDPERKRKRRVARYKFYGTEGKLKRSL 110

Query: 75  TKGFQWIKKRCAKIIYGF 92
            KGFQW+K +C KI   F
Sbjct: 111 KKGFQWLKVKCIKISASF 122

BLAST of Cp4.1LG04g08590 vs. NCBI nr
Match: EEF49942.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 75.5 bits (184), Expect = 2.05e-15
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 46 WWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
          WW   ETKRK+RVA+YKFYAVEGK+K SI KGF+W KK C++I++GF
Sbjct: 49 WWNAPETKRKKRVAQYKFYAVEGKVKISIKKGFRWFKKTCSRIVHGF 95

BLAST of Cp4.1LG04g08590 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 8.62e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0

Query: 28  ERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAK 87
           +R++ K+    +K SV+ WWK  E KR+RRVAKYK Y VEGK+K SI KG +W K RC++
Sbjct: 46  KRQAIKKPSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSR 105

Query: 88  IIYGF 92
           I+ GF
Sbjct: 106 IMSGF 110

BLAST of Cp4.1LG04g08590 vs. ExPASy TrEMBL
Match: A0A072U413 (DUF3511 domain protein OS=Medicago truncatula OX=3880 GN=25499646 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.95e-16
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 15  RSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSI 74
           R    V + ET++ER      VV+ KKS+  WW   E KRKRRVA+YKFY  EGKLKRS+
Sbjct: 51  RERSVVKNYETLRERS-----VVKKKKSMS-WWNDPERKRKRRVARYKFYGTEGKLKRSL 110

Query: 75  TKGFQWIKKRCAKIIYGF 92
            KGFQW+K +C KI   F
Sbjct: 111 KKGFQWLKVKCIKISASF 122

BLAST of Cp4.1LG04g08590 vs. ExPASy TrEMBL
Match: B9RFH1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1434550 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.93e-16
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 46 WWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
          WW   ETKRK+RVA+YKFYAVEGK+K SI KGF+W KK C++I++GF
Sbjct: 49 WWNAPETKRKKRVAQYKFYAVEGKVKISIKKGFRWFKKTCSRIVHGF 95

BLAST of Cp4.1LG04g08590 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.17e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0

Query: 28  ERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAK 87
           +R++ K+    +K SV+ WWK  E KR+RRVAKYK Y VEGK+K SI KG +W K RC++
Sbjct: 46  KRQAIKKPSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSR 105

Query: 88  IIYGF 92
           I+ GF
Sbjct: 106 IMSGF 110

BLAST of Cp4.1LG04g08590 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.56e-14
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 38  EAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
           E  K  + WWK  E KR++RVAKYK YAVEGK+K SI KGF+WIK +C++II GF
Sbjct: 53  EPSKMKKSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Cp4.1LG04g08590 vs. ExPASy TrEMBL
Match: A0A2Z7ADN2 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_31850 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.28e-13
Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 46 WWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 92
          W+ G E KRK+R+AKYK Y+VEGK+K S+ KGF+W KK C++I++GF
Sbjct: 48 WYGGGELKRKKRIAKYKLYSVEGKIKNSLKKGFRWFKKTCSRIVHGF 94

BLAST of Cp4.1LG04g08590 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 63.9 bits (154), Expect = 7.6e-11
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0

Query: 46  WWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYG 92
           WW   E KRKRRVAKYK Y+ EGK+K ++ K ++WIK +C+KII+G
Sbjct: 78  WWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of Cp4.1LG04g08590 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 50  SETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYG 92
           +ETKRK+R+A YK YA+EGK+K ++ KGF WIK R + II+G
Sbjct: 69  AETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of Cp4.1LG04g08590 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-08
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 50  SETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 93
           +E KRK+R+A+YK Y VEGK+K ++  GF+WIK +C +I++ F
Sbjct: 68  AEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of Cp4.1LG04g08590 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.5 bits (114), Expect = 3.3e-06
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 37  VEAKKSV--EKWW--KGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF 93
           V+ +KS+   K W     E +RK+RVA YK Y VEGK+K S    F+W+K+R  +++YG+
Sbjct: 45  VKKEKSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

BLAST of Cp4.1LG04g08590 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 47.4 bits (111), Expect = 7.3e-06
Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 27  KERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCA 86
           K +RS K      KK   K    +E +RK+RVA Y  Y VEG++K S+ K F+W K+ C+
Sbjct: 66  KSKRSNK-----VKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCS 125

Query: 87  KIIYG 92
             +YG
Sbjct: 126 NAVYG 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588612.11.15e-55100.00hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588594.18.02e-5498.92hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_013450451.11.02e-1553.85uncharacterized protein LOC25499646 [Medicago truncatula] >KEH24479.1 DUF3511 do... [more]
EEF49942.12.05e-1568.09conserved hypothetical protein [Ricinus communis][more]
XP_022151002.18.62e-1553.85uncharacterized protein LOC111019023 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A072U4134.95e-1653.85DUF3511 domain protein OS=Medicago truncatula OX=3880 GN=25499646 PE=4 SV=1[more]
B9RFH19.93e-1668.09Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1434550 PE=4 SV=1[more]
A0A6J1DCB34.17e-1553.85uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3BTT81.56e-1461.82DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A2Z7ADN21.28e-1359.57Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_31850 PE=4... [more]
Match NameE-valueIdentityDescription
AT3G05725.17.6e-1158.70Protein of unknown function (DUF3511) [more]
AT3G62640.12.1e-0859.52Protein of unknown function (DUF3511) [more]
AT2G47480.13.5e-0851.16Protein of unknown function (DUF3511) [more]
AT5G11970.13.3e-0643.33Protein of unknown function (DUF3511) [more]
AT1G72720.17.3e-0641.54Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 49..91
e-value: 3.8E-20
score: 71.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR33193:SF48SUBFAMILY NOT NAMEDcoord: 32..90
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 32..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g08590.1Cp4.1LG04g08590.1mRNA