Cp4.1LG04g06870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g06870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionmediator of RNA polymerase II transcription subunit 15a-like isoform X2
LocationCp4.1LG04: 4622669 .. 4635538 (+)
RNA-Seq ExpressionCp4.1LG04g06870
SyntenyCp4.1LG04g06870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCCGAAAGTAGATAGGTATATAAAAATATTTATCGAGCATCGTAAATAAATTCTTCCCTTTACGATCATGATCAAAGGCATAAATTGCCCTAATCGATCGTTACGATGATGATTTGATTGAGTTGAATTCATTATTCGATGAAAGTTTACAAGTAAAGTATTCGAGTTAGGTTTAAAACGATAAATTTGGAATGGGAATGAAATGGGGGATTACTTACCTAATCTGATTCAAAGATTTGAGAGGTTTTTAGTTTCAATTTGGGAGAAATTCATAAGAACATGATGAACATTGGGGAGAAACCGAGGAACTTGGTGTGCAAGTTCTGAGGAGACAACCATTTATGAGGCTGTTCCCGAGCAATTCTAGAAGGAAAAGGTCGTTTCTTTCCTGTCTGGGATTGTTCTCCACGCAACGGATTAAGTTTGTGTAACAAGTCTTCGATCATCATATTTTCTCTTGAGATCTCTTTGATTTCCTTAATTTCGGGGTTGATCAGCTTCCGATCAACTGGCGAATTGGTTGTACCCGATTTACATCTCCGCCGCCGAATTCTGGGTTTGATTCAGCCCTAAATCACGAGTGAACTCCATAACAGTCTTGCTTTCTCTATCGTTGAAGGACTCTATTTAATCTCTCTTTTTGCGTTGTTATTGGGTTTTTGTAATGGATTCGAGTAATTGGAGGCCTGCTCAAGGTGGAGAATCCGGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCACGGCATCGAATAGTCAACAAGATGTATGATTTCTTGCTTCTTTGAGAAATTTGTCTGAGATTTTGTAACCTTTTGTGTTCATAGTTCGCTGCTTAGACTATTACTATGGGATGGTTTTCTGAATTAAGCTATGAACGGAAGAACTTTGGAAGTATAGAATCATCTTCCACCTTATTCTTCCTCTTCTTAGATTGTGTATAACTGATGGATGCTTTGGGATCCCACGTCGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTTCTTAGTAGACTGTGTTTAAAAATCGTGAGGCTAACGACGATACGTAATGGGGTAAAGCGGACAATATCTACCAGTGGTGGGTTTAGGTTGTTACAAATACGAACGGATTCCAAAACCTTGTTGAGGATTGTTGTAAGGAATACTATTTTCATTGGTTTATGAGGTCTTTTGGGGAAACCAAAAGCAAAGCCACAAGGGCTTATACTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGATTCCTAACAAACCCAGTTCGTTAAAATTATCCTTGTTCATTTTTCCATATCTGGTTTGAAGATACGGTAGGTTAGGTTCTGTGGAGGTGGTTCCTATTTGTTTCTTCAGGTATTACCCCTTCTTTGAACATAAGAAGTACAAGTTATTTGAAGTAGTATGGATCTTATTGAATTTTCCTCGACGGTTCTAAAGTTCATTCCTTCAAAATGCCCAATTTTGAGATCCCACCTTGGTTAGAAAGGGGAACGAAACATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAATCGTGAGGCGCCAAAGTGCATAATATTTGTTAGCGGTGGGCTTGAGCTGTTATACTAATATTTTGAATCATGGACGTGGATTACTGCTGTAGTTTTTCGTTCCTGAATAGCTTCTCGTGCTTGTGTGTTTAGTGAACTTTTCAGCCATTATATTTTCCATTTTTATGTAGAATGGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCATGAGGGATTGAGTGAGCTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTACACCGCCGCTACCAGTCAGGTTCGTCCTGCTCACTTGTATAAAGCCCTGATTTATTATGCTATCTACTAAATACAACACTGAGTACTCACCATTTCTATTTTGAACCTCTGATTTCAGTCAGATTACCTAAGGAAAATATCTCTGAAGATGCTTACTATGGAAACCAAATCTCAGACCACCGCATTACCATCCAATTCTATGGTGCCTACCAATAAGCCTCTAGATTCTAGTAAGTTATCGACAGTCGATCTGCGACTATATTGTACGTGGTGAAACTTTCACTAACGTTTTTTTAAGTCAATTTGTAAACTAATTTCTTGTTATAGCGTTTTTGATTACTCTGTTCTTGAATATTGTAACGATTTCTTACTTAGCTTGTGGCGTTTTGTTAATTTTATTTGACTTTATGTTGTGTATGATAATTTAAACAGCATCACAGAGCATGCAGTCTCAAGTTCTAAATCAAGGGCCATCAATGTCTGGCCCAATGTCTTCCAATCAACCTCAGCCACGCCAGCAATTACTCTCGCAGAGCATCCAAAATAATATTGCTTCTCAGAGTTCGTCCAGCTTACCTTCGTCAGTACCTCCTGTTGCGGGATTGGCATCAGCTCCAATGGCGAACATAGGTGGCCAGAATCCAAGCATGCAAAATGTATCTGGAGTTCCACAGAGTTCTGTTGGGAATGCTATGGGTCAAGGGGTTTCTACTAATGTATTTACCAACTCTCAGAGGCCAATACAAGGAAGACAAGTGGTTTCCCAACAGCAGCAGCAACAGCAGCAGTCACAAAGCCAGCAGCAACAGTTATTTTTTCAGCAACAACATTTACAGCAGCAGATTATGAAGCAGAAGTATCAGCAGGGAAGTATGCCACACCAACTTATGCAATCTCACATCCCACAACAGCAAACGAATCTAATGGCACCGAATCAACTCCCATCGTCTCAGCAATCTGTTATGCAACCTTCGCTCTCGAATCTTCAGCAAAACCAGCAATCTTCCATTCAACAGCCCACTCAATCCATGCTTCAGCAACCTCCACAGCCAGTTCTAAGGCAGCAGCAACAGTCCCAACAACATTCTCTCCTGCATCAGCAGCCCACAATGTCACAGCAGGCGAGCTTGTCTTCACAGCAGCAACAACAGCTAATTAATCAACAATCTAATTCTTCAAACATGCAGCAGAATTCACTAATACAAAACAGTGTTGGGGACATGCAGCAGCAGCTGCCACAGCAATCAAGGTCGCATGGGCAGCAGAGCAATCTATCAAACATGCAGACTCCACCATCGCAGCAGCAGCAGCAGCAGCAGCAGTTAATGAATCAGCAAAGCAGCCTATCAAATTTGCAGCAGCCGCAGTTAGGACCTCAAAGTAATGTTTCTGGACTACAGCAACAACAGATGCATGGTACTCAGTCAGGTAACTCAAACATGCAATCAAATCAGCACGGTGTGCATATGATGCAACAGAACAAGGTTCAAATGCAGCAACAACCTCCACAAAATCCATCGAATTTGTTGTCAACGCAAGGTCAGCAAGGACAACTTCAATCATCCCAACAGTTGATGTCACAGATTCCGTTGCAGTCCGCACAAGTCCAACAACAGGTGTCTTTACAGCAGCAGCAGCAGCAGCAGCCGCAGTCAAATACCTTGTCACATGAGCTCCAACAAAGGCTTCAAGCTGGAGGTCAAGCTCCAGGCCCCTTACTTCAATCACAGAATGTAATGGATCAGCAAAAGCAGTTGTATCATCCACAAAGGGTCCTTCCAGAGACATCATCAAGTATGCTTTCTTGCTTTGTCTTAGTTTTAGATCCTTATCAATAACTACTGAATGATCAAACTAGTAAGATATTATCAATGATAGCTAAATGCTGATGACCTTGTTGAAACCTGGCGTGTGTGGAATGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAACAGTAACATAGGATCGAAGGCACAAGAGTTTCAGCCCTTGCATCACAACCAAAGACATTCTCTGGCATGGCCTCCACTATATGCTTCCCTTTCCTCTTTGGCATAGCATCCACTTTAATATCAAGGCCACTCAAAACGAATGAAAGCCCAGTATTATTTCCTTCCTCTTTTTAGTTGAAGCTTCTATCTTTGGAACCAAAGTGCTCGATGGCCCACCTTCATCAACGGGCACTTCTTTTCCTCATTTTGGTTCTCTGAGGGCCTCTCTGACACTCTTTGAAAAATGTTAGGCAGCTCTGAACTGTCCCCATGTTATGGAGTATTTTCAAGTTTATTTTTCTCATCATCATTGTTGTTATTATTATTTCCACAAGTTTTTAGGTCCTATTGTGCACACCTTGACTGCCTGATCCGACTGTTTTTGGTTGCCAAGAAAACTCGTAGGATTTTAAATCATAAGTAGGTGGTCACCATGGTTTGAACCTACTCTTTCTAAGCCTTTTATTTTTATTCATTGTCCCCCATGTCAACTACCATGGTGGTTCAACAAAAGAGTAGTGTGATTACTACAAAGATTTGTGAAGGGCGCTGTAATGTGAGGCTGTGCAATCATAATTCAGAAGCCATCTACGTATTTCTTTTGTTGTGGAAAGCTCTTTGGTTTCTTTCTAACTAAAGAAGCTATCAAAAGCTATCTGTACACTTCTAAAGAATTCAGTTTTTCCTTTCAAGCACCAATGTAATTGGAAGGCACAAGGATAAGGTGAATAATCCAAACGTATTAGATTAACTTTTGGTAATAAACCTGCATTTAAGAAGAGGTAATCGATGCTCTATCAAGATACACAAAAAACATCCTGATGGAGAAAGATCCCCCTTCTAGGAATTGTTTTTCTAAAGTAGTAGTTCATGGATATTTAAGCTTATGCACATGAGTATTCATTAGAAAAACTTAGCTTTTTTTTGGCAATTTACCTCCTGTTTCCATGTTTTTTTGTTGTTCTTGGAAGCGGTGGTTGCGGTGTTGGTGTTCTTCTTTCCCCCATCTTCTGTATAGACTGTGGACCTTCTACTGCCGAATTCTTTCTTTTGTTGTTTTCCATAAAAAATGAGTTTCTTATTACAAGGGAGCACACTATCTCTTTTCTGTAGTTCACTTATATCCCCTTGCTCACATTTTCCATATCCGCTGACCTTTATTTAATTTTTGTAGCATCTTTAGATTCCACGGCTCAGACAGGACAAGCTAATGGTGGGGATTGGCAAGAGGAGATTTATCAGAAGGTACTAAGCTTACACTCCATCTCTCTTCTATGAATTTTTCAAGATCCATAAGAAAGTTCGTTCTGTTTGCAATATTATTAGAGAAGTTACAAAGTGTAAATGTTGGCTTTGCTATTCTTTCTTGTGGTAGAGTTTCCTACCTAGCAGCCCATTTTAACTTGATTTATTTTTATGTTAATAATACAAAAAAATTATTACTATGCAAAAGGTTAGACTATCAAGTAGATAAGGGGTAAATTTTGAGCAGTAAGCTTTGGGGAAAATCTGCAATAATAAAAATTCAGTGGCTATATCCGTAGAGACCAATTCAAATCCTACTGTGAAAAAGAAATGCTTTTAATTCTTCAGTGAAAAGTTACCAATGTAAACTGTCTGCTCCTATATACCTCCTTACAAGAGTTCACAAAAATAATTAAATAAATAAATGACTCACCCAATTTGTGTACATATGATACGTAATTACAAAACGATTTAGAATTCTTTTAGGTAGTGTGTATGCCATTGACCGTGGAAAGTGTAATTCATCCTTGCCCTTTCCATTCACTTTGATCTCTTTGATTTTTTCTGGATTCTCTTAATTGGGTGCCGAAGCTTTTTATTAATTCAAGATGTTAAAGAATGTTTTATTATTCTTTGTCCCATAAAGGTAGGTGTTGCGACAGTGGGAATGCTTTGTTGGTAGTTTATTTCAGGTCCTATTGGAAGGGCAGTGAATTGGGCTATGGGTTTGTTTGGTGTTGGGTAGGATTTGGATTCTGTAGGTGCTGATGGCCTTATTGGATTGGTTGGATAATGGGATAAGCATGCTCAAGGTATACTCTGGGTTTAAAAAAAATCGTATTCTTCTAGTTTCCTGTACTTTTTCTACAGCTCCAATATTATTGGCCAACCAAAGGTGGTTAGTAGAATTATGGGTTTATTGTTTCTTTCGAGCCTCAAAGTTCATGGTGGAGCATTGACTGCATTCATTCATAAAACTTGAATTAGGACTAGCCTGACCTTTTTCTTGGAGACTCAATAAATTAAAAATCTGAATGAGAAATTCAATCATTACTATATGGACAATATTCTTCATCCTTCCTTCAAAGCACGTACCAACTGGATTTTAAAACCATGTTTGGGTATCTTTTGTTGAACATTTCAGTAGCATTTATGCCTTCATAGGAAAAATGACTTTTATCGTGAACTTCCCTTTACATGGTACAGAAGCAACTTCCCTGAGCTTTGAGAATAATTAAATCAAATAGACGGAATAAACTTGGCTACTGGAGATCCCAAGTTCATCTATCTAATTCTCTCTTTAGTCGCACATCATTCAAGAGCATAAAAACAAAGAGTTCTTATTCCATCTCGTCATGCACTAGAACTGCTATTTTGCTTTAAAAGTTTGGAATTTGATTTATAAGTGGTTTGGTTTTTGTCCTTTTTTTTTTCCGAAGATTGTGGACGAGTGGCTCCTAGAAGTTATTTCTGGCAATTGATTTAAAGACGAAGGCTAGAGTGCTATGGTTTATTGCAACGAGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTTCTTCTTCTTTGGAAGGAAAGAGTGATCTTTACTGCCAATCAAATTTATTGAATTCTTTTAAATTGGGTTGTTTATAGCAAATTCTATGTAACTACTCTACTTCTATCAAAATAGATATGAGACATTATGTTTGATCTCTCCTCTTTGGCATGAGTAAGTTTTGTCCCATGGCCTTTAAGCTATTTTGGCTGGGTTGGTACTAACACAACTTTTCCCATCTTCCAATGAAAAAGAGAAAGACAAAGGGTTATGTTTTAAAATTGTAATGAACCTTGAAAAGGCATACAAGAGGGTGGATTGGGATTTCCTCGTTGTTCTTGACGCTAAAGGTTTTGCTTCTAAAATAAGGCCTTGTGAAAATCCCCTAGAAGATCAAATTCTGTGTGGTAGGTTTCACTGGCTGTATTCAGAGAAGATCTCCTTTGGTGTTAGGCCCGCTGTGGTGCATTTTGTGTAGTAGGTACGAGGAGGATTGTGAGGTTTAATACGTTCTATGGGTTTTTGTTTCCGAACCTTTTTGTAGTTATGAGATCAGTTGGATTCTCTTGGACGAGAGTCCTTTTCCATAGTTAATGGGTGAGCTCCATTTCTATAGTTAATGATACTCTTATTTTCTCAATGTTTGAGTAGGGAAGATCTACAATCTCTTCAAAATCATTTATATCTTTGAAAAGACATTTGGGCCTAAGGTGAATGGGACTAGATCCATGCTTGTGGGTATTGATTGCATTGGTGAATGTTGCGTTGATTACGTGGCTAAGGACTTTTGTTCTATAGTAGCTATTTGGGCTTTGGCCGTTCATTAGGTTGGCATCCAGCTGTTCGGAAGTCGAGGTTTAATGTTTTAGAATCTGGCTTTGGAGAGGATTGCTTCTAAAGCCATAGAAGCATAGTTTATTTTGATTTCTCTGTTACTCTCTAACTTTATTTGTTTAAGGCGTCCAAGTGTTAGAGGATTGTGTTTCGTAGGTTTCTTTTGTCAAAAGGTCTGATAGAGGTGGGTGGCTACCGTCGGTTTGATTGGAAGAAAGTGTCTCCAAATAAGGCGTTTCGACATAGGATGATCTACTTTGTTTCTTTCTTTTGTTTTTTTTTTTTTTGGTCAAATGGGAATCTTTGTTGTACTTTCTTTAGCATATATCTTTTTTTCTTGGTGGAATTTAGAATCCTTTTAAAAATATTGTAAATTGCTTCCTTCTTCTTTTTTGTAGATTAAATCTATGAAGGAGTTGTACCTTTTTGAACTGAAAGAAATGTATCAGAAAATTCTTCCAAAAGTGCATCAGGTACGTGATTCGACATCTATATCTGACGAACAATCGGATACCATCTATTGAAAAGCCAAAAGGAGTTGTGAAGACAAGTTTCAATACTATTTTGAACTTTTGTCTTTGGTTCATTTGGTCCCTTTACATTCAAAACGTCTATTTTAGTCTCCATATGTTTGGCTCTGGTTCATTTTGGTCTCTGTACTATTAAAATGTTCGTTTTGGTCCTTGTAATGTTTAAAGCGGCCAATTTAGTCTCTATTTACAAATTGTAAGTATAAATTTTATACCCAATGGAAATCCTTTAGTGCGAATCTTGACCACATGTCGAGAAATGTATCAAGTCACATGGAGTAAGTGAAGTGTCATGCTATAACGAAACCAAATTGGTCGCTTTTTAAAAGTAGGACTAAAATGAAAATTTGGAACGTACACGACCAAAAATGAACCAAAGTCTAAAGTCTATGGACCTAAATGGACGTTTGGAAAGCACAATGACCGAAATGAACTAAAACTTCTTTTCTCCTTTAGCTGTTGAATACCTTTCCCTTTACGCCCATTGTAGTTCTTATAATCCTTGTATTAGTATGCAGTGTGATATTGTTTAATTTGATATTTTATTTTCCAGTTTGACAGCCTTCCGCAACAACCAAAGTCAGAGCAGCTAAATAAGCTAAGGGCATTTAGGGTGATTTTGGAACGCCTTATAGCGTTCTTACAGGTTCCAAAGAATAATATTGTGATTGGATTTAAAGATAAGATAGGCCATTACGAGAAGCAGATTGTTAGTTTCTTAAACTCGAACAGGCCAAGAAATTCAGTGTCTACACTGCAGCAAGGACAGCTCCCTGCCTCTCACATGCAATCTATGCAGCAGTCACAATCACAGATGACTCCGTTACAGTCGCCCGAAAATCAAATCAATCCCCAACTGCATTCTGCAAACATGCAAGGTTCCGTGGCTCCGGTGCAGCAGAACAATATGAACAATATGAACAATATGCAACATAATTCTCTTCCAACTTTTTCAGGATCAGCACCACAACAGAACATGACGATTCCGATGCAGCCGAGTTCCAGTTTGGAATCAGGACAAGGGAATTCACTGAGCTCGTTGCAGCAGGTTGGTGCTGTGTCTTTGCAACAGAATCCTGCTAACAGCTCCCAACGGGCGAACAATAGTTCTTTGGCATCACAAAATGGGGTTAATGCTCTTCAGCCAAATATTAGTTCTCTTCAATCCAACACTAATATTCTTCAACATCAACATATGAAACAACAGGATCCGCAGCAGTTGCTGCAATCGCAGCAGCAGCTGAAACAACAGATGCAGCAGAGACACATGCAGCATCTGAAGCAGCAGATGTTGCAGCATCAGCAGCAACAGCAGCAACAACCACAATTACATCAGCAACAGTCACAGCTACAGCAGCAACAACCACAATTACATCAGCAACAGTCACAGCTACAGCAGCAAGGAAAGCAGCAGTTACCCACACAAATGCAGGCGCACCAAATGTCGCATCTTAACCAAATTGAGATGAATGACCTGAAGATGAGACAAGGGGTTGCTGCAAAGCCAGGGATGTTTCAACATCCAGGAACTCAGCGCTCAGCTTATACCCATCCACAGATGAAACCAGGGACTTCATTTCCAATTTCACCTCCGATCTTTCAGGCGACATCCCCTCAAGTTACCCAAAATTCTTCCCCACAGGTCGACCAACAAAATATGTTTTCATCCATGAACAGAATTGGAACACCTTTGCAATCTGCGAGCTCCCCTTTTGTTGTCCCATCTCCTTCAACGCCTCTGGCTCCATCTCCAATGCCTGGTGATTCTGAAAAACCTACTTCTGCTGTCTCGTCACTTCCAAATGCTGGGAATACTGGACAACAAATGAATGTGTCTGGGGCACAAGCCCCATCTCTTGCCATTGGCACCCCTGGGATATCTGCCTCACCATTGCTAGCTGAGTTTAGTGGTACAGATGGCGCTTATGCCATTGCATTACCAACTGTTTCCGGCAAATCAAGTGTTACAGAGCAGCCTCTTGAACGCTTAATTAAAGCGGTTAGTCAAAAACTTGTGTGCTATTTGTTCGTGGATTTAATTGTTGCCTATGCTTCTTGATTGTTTCTATCATTGGTAACCTTCTTATGGTTTTCAGGTTAAATCAATGTCACCTAAAGCTTTGAATGCTTCTGTCAGTGGCATCGGATCAGTTGTCAGTATGATTGATAGGATAGCCGGCTCAGCCCCCGGTAATGGATCGAGAGCTGCAGTTGGGGAGGATCTGGTTGCCATGACTAAATGTCGGCTGCAAGCAAGAAATTTTGTTTCACACGATGGGTCAAATGGAACCAAAAGGATGAGACGTCACACAAGTGCAATGCCCTTAAACGTTGTATCATCAGCAGGAAGTGTAAATGATGTTTTTAAACCATTGACCGGTGCAGAGACATCTGATCTTGAGTCAACTGCAACATCTAGCGTCAAGAGGCCCCGGATTGAGGTAATAACAATTTTTACGTATTGTATTTTCTTTGAGGCTGAAAGTAAATAGTAGTAGTTTAGATAGATATAGTTAGGAGTCACCACAAGTTTAAGAACTGATAAGCAATGTAATATAACTACATTAGAGGTCTCACATATGGATATGCTACACCATTTTAGAATCATATAGTTCCCCTTTTTCTCATTTTAATATTTTTATTGTTTCTCTAATTTGATTGCAAGAACATGTTCATATTTCATCAGAAATTCAAAATTAAGTAATTAGGTCTAACAACATAGTTATAAGTGGCCAACAGGCGTACATGGACCTGTTACTTGAGCTATCATATATGTGTTCTTAGGATAGTTAGTGCTATTGGGTTGATGAAATAATTTTGTGTGAAAGAGACTTGAATAGAAAAGCAGCAAAACAACAAATATGAAGGCCTAAAATCAATTTAGATTTTATAAACATTTATAAGGGGAAAGAAAGAAAGCAACAGATTAACGGTGAGATCCCACATCGGTTAGGGAGGAGAACGAAGCATTCTTCATAAGGGTGTGGAAACTTTTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGGAAGCCTAAAAGGGAAAACCCAAATAGGACAATATTTGCTACAGTGGGCTTGGACTGTTACAAATAGTATCAGAGCCAGACATCGGGCGATGTGCCAGCGAGGAAACTGATCCCCGAAGAGGGGTAGACACGAGGTGGTGTGCCAGTGAGGACGCTGGGCCCTAAGGATGCTGAGCCTCGAAAGGAACGAGTGCCAGCAATGATGCTGATCCCCAAAAGGGGGTGGATAGTGAGATCTCACATTGGTTGGGTAGGAGAACGAAGCATTCTTTATAAGGGTATGGAAACCTCTCCCTAGCAGACACCTTTTAAAAACCTTGAAAGGAAGCCTGAAAGGAAAAGCCAAAGAGGATAATATCTGCTAGCAGTGGACTTGGGCTGTTACATTGATATTATAGATCACAGCAGATAGAATAGACCGTGCCGTTAGAATGTTCTTGGTCCTTTAACAATAGAATGTTCTTGCTCCTTTGACAATTAAAGTAAGTTTCCCTTGGGCTTCTTGCTATCTTCTTATCGATCTTTTTAAGGCATTGTCCGTTTTAAATTTGTATTGGCCCACTTTAGTTTCACGAATCACATGCTTTACTCCTTTAGTTATATATATATATATTGACCTGTTGCAGGCCAATCATGTTCTTCTGGAAGAAATAAGGGAAATAAACCAACGCCTGATTGACACAGTGGTGGTAATTAGTGATGAAGTAGTTGATCCAAGTGCTTTAGCGGCTGCTGGTGATGGCAGCGATGGAACAATTGTGAAGTGCTCTTTTAGTGCTGTGGCTCTCAGTCCCAGCTTAAAATCCCAATACACTTCTGCACAAATGGTGCGCATATTTGATACAAATCAGGTTCTTCATTGTCTGCATAATAATCTGCTTTCTTACTCGTTCATTATGATTATGCAGTCCCCAATTCAGCCTCTACGGTTGCTTGTTCCTACAAATTATCCGAACTGTTCCCCAATACTCTTAGACAAGTTTCCTGTTGAAGTCAGGTTAGTCTACATGGGCTCCTTGTTTTGTTTGTCAGCTGTTTTTCTGTTCTTATATTCTGAAAAAAAAATCGGTTCTATATTCCAAAATACGAAAAAATGACTTCTCTCGCACCCCTTTTTGAATCTTTGATTTTACGTGTTAGTTTTTATTCCAAGATAATTTCGTTATTGGTCATCTGCTGCTGGTTTCGTTATTGGTCATTTTCAGTTTCAGTTCTTTTTCGGTCCTTATTCGGTAAACTATCGTTATTATCGTCGTTTTTTTAGCAGCAAGGAATATGAAGACCTTTCAATAAAGGCCAAGTCCAGATTTAGCATATCGTTGCGAAACCTTTCGCAGCCAATGTCGCTTGGGGACATAGCAAGAACTTGGGATGTCTGTGCTCGTGCTGTTGTTTCCGAATACGCTCAGCAGAGCGGTGGTGGCAGCTTCTGTTCGAAGTATGGGGCTTGGGAGAACTGTTTGAGTGCTGCATGATTTGAAAAATCCATGGAATGGATGTTCGCGAACCATCTCGAGGTATTTCCGGCAGGCGAAATGACGAGACCAGCTCTGCTTGCTTAGGGAAGACAAGGCTGCCTATTTAAATAATGTATCATAGCATATAATTATTCCTCTGTGAAGCATGGAGGTAGTTTAATCAAATGGCATGGCTAATTAAGTTGTTTGACTGCCACGATGGATTCGTTTGTTTGTGAAAACTTTGAATGCCTCTTTTGGCTATATGTCTGTAAATCGTAAGAAGGGCGGACTGTAAAAAGGAAATCCTTGATATGTTCATTAAATGCATAAATTTATGCCTGAAGCTAGCGAGAACTTTTTGGTTGAAAAGCTCT

mRNA sequence

TATTCCGAAAGTAGATAGGTATATAAAAATATTTATCGAGCATCGTAAATAAATTCTTCCCTTTACGATCATGATCAAAGGCATAAATTGCCCTAATCGATCGTTACGATGATGATTTGATTGAGTTGAATTCATTATTCGATGAAAGTTTACAAGTAAAGTATTCGAGTTAGGTTTAAAACGATAAATTTGGAATGGGAATGAAATGGGGGATTACTTACCTAATCTGATTCAAAGATTTGAGAGGTTTTTAGTTTCAATTTGGGAGAAATTCATAAGAACATGATGAACATTGGGGAGAAACCGAGGAACTTGGTGTGCAAGTTCTGAGGAGACAACCATTTATGAGGCTGTTCCCGAGCAATTCTAGAAGGAAAAGGTCGTTTCTTTCCTGTCTGGGATTGTTCTCCACGCAACGGATTAAGTTTGTGTAACAAGTCTTCGATCATCATATTTTCTCTTGAGATCTCTTTGATTTCCTTAATTTCGGGGTTGATCAGCTTCCGATCAACTGGCGAATTGGTTGTACCCGATTTACATCTCCGCCGCCGAATTCTGGGTTTGATTCAGCCCTAAATCACGAGTGAACTCCATAACAGTCTTGCTTTCTCTATCGTTGAAGGACTCTATTTAATCTCTCTTTTTGCGTTGTTATTGGGTTTTTGTAATGGATTCGAGTAATTGGAGGCCTGCTCAAGGTGGAGAATCCGGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCACGGCATCGAATAGTCAACAAGATAATGGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCATGAGGGATTGAGTGAGCTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTACACCGCCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAAGATGCTTACTATGGAAACCAAATCTCAGACCACCGCATTACCATCCAATTCTATGGTGCCTACCAATAAGCCTCTAGATTCTACATCACAGAGCATGCAGTCTCAAGTTCTAAATCAAGGGCCATCAATGTCTGGCCCAATGTCTTCCAATCAACCTCAGCCACGCCAGCAATTACTCTCGCAGAGCATCCAAAATAATATTGCTTCTCAGAGTTCGTCCAGCTTACCTTCGTCAGTACCTCCTGTTGCGGGATTGGCATCAGCTCCAATGGCGAACATAGGTGGCCAGAATCCAAGCATGCAAAATGTATCTGGAGTTCCACAGAGTTCTGTTGGGAATGCTATGGGTCAAGGGGTTTCTACTAATGTATTTACCAACTCTCAGAGGCCAATACAAGGAAGACAAGTGGTTTCCCAACAGCAGCAGCAACAGCAGCAGTCACAAAGCCAGCAGCAACAGTTATTTTTTCAGCAACAACATTTACAGCAGCAGATTATGAAGCAGAAGTATCAGCAGGGAAGTATGCCACACCAACTTATGCAATCTCACATCCCACAACAGCAAACGAATCTAATGGCACCGAATCAACTCCCATCGTCTCAGCAATCTGTTATGCAACCTTCGCTCTCGAATCTTCAGCAAAACCAGCAATCTTCCATTCAACAGCCCACTCAATCCATGCTTCAGCAACCTCCACAGCCAGTTCTAAGGCAGCAGCAACAGTCCCAACAACATTCTCTCCTGCATCAGCAGCCCACAATGTCACAGCAGGCGAGCTTGTCTTCACAGCAGCAACAACAGCTAATTAATCAACAATCTAATTCTTCAAACATGCAGCAGAATTCACTAATACAAAACAGTGTTGGGGACATGCAGCAGCAGCTGCCACAGCAATCAAGGTCGCATGGGCAGCAGAGCAATCTATCAAACATGCAGACTCCACCATCGCAGCAGCAGCAGCAGCAGCAGCAGTTAATGAATCAGCAAAGCAGCCTATCAAATTTGCAGCAGCCGCAGTTAGGACCTCAAAGTAATGTTTCTGGACTACAGCAACAACAGATGCATGGTACTCAGTCAGGTAACTCAAACATGCAATCAAATCAGCACGGTGTGCATATGATGCAACAGAACAAGGTTCAAATGCAGCAACAACCTCCACAAAATCCATCGAATTTGTTGTCAACGCAAGGTCAGCAAGGACAACTTCAATCATCCCAACAGTTGATGTCACAGATTCCGTTGCAGTCCGCACAAGTCCAACAACAGGTGTCTTTACAGCAGCAGCAGCAGCAGCAGCCGCAGTCAAATACCTTGTCACATGAGCTCCAACAAAGGCTTCAAGCTGGAGGTCAAGCTCCAGGCCCCTTACTTCAATCACAGAATGTAATGGATCAGCAAAAGCAGTTGTATCATCCACAAAGGGTCCTTCCAGAGACATCATCAACATCTTTAGATTCCACGGCTCAGACAGGACAAGCTAATGGTGGGGATTGGCAAGAGGAGATTTATCAGAAGATTAAATCTATGAAGGAGTTGTACCTTTTTGAACTGAAAGAAATGTATCAGAAAATTCTTCCAAAAGTGCATCAGTTTGACAGCCTTCCGCAACAACCAAAGTCAGAGCAGCTAAATAAGCTAAGGGCATTTAGGGTGATTTTGGAACGCCTTATAGCGTTCTTACAGGTTCCAAAGAATAATATTGTGATTGGATTTAAAGATAAGATAGGCCATTACGAGAAGCAGATTGTTAGTTTCTTAAACTCGAACAGGCCAAGAAATTCAGTGTCTACACTGCAGCAAGGACAGCTCCCTGCCTCTCACATGCAATCTATGCAGCAGTCACAATCACAGATGACTCCGTTACAGTCGCCCGAAAATCAAATCAATCCCCAACTGCATTCTGCAAACATGCAAGGTTCCGTGGCTCCGGTGCAGCAGAACAATATGAACAATATGAACAATATGCAACATAATTCTCTTCCAACTTTTTCAGGATCAGCACCACAACAGAACATGACGATTCCGATGCAGCCGAGTTCCAGTTTGGAATCAGGACAAGGGAATTCACTGAGCTCGTTGCAGCAGGCGACATCCCCTCAAGTTACCCAAAATTCTTCCCCACAGGTCGACCAACAAAATATGTTTTCATCCATGAACAGAATTGGAACACCTTTGCAATCTGCGAGCTCCCCTTTTGTTGTCCCATCTCCTTCAACGCCTCTGGCTCCATCTCCAATGCCTGGTGATTCTGAAAAACCTACTTCTGCTGTCTCGTCACTTCCAAATGCTGGGAATACTGGACAACAAATGAATGTGTCTGGGGCACAAGCCCCATCTCTTGCCATTGGCACCCCTGGGATATCTGCCTCACCATTGCTAGCTGAGTTTAGTGGTACAGATGGCGCTTATGCCATTGCATTACCAACTGTTTCCGGCAAATCAAGTGTTACAGAGCAGCCTCTTGAACGCTTAATTAAAGCGGTTAAATCAATGTCACCTAAAGCTTTGAATGCTTCTGTCAGTGGCATCGGATCAGTTGTCAGTATGATTGATAGGATAGCCGGCTCAGCCCCCGGTAATGGATCGAGAGCTGCAGTTGGGGAGGATCTGGTTGCCATGACTAAATGTCGGCTGCAAGCAAGAAATTTTGTTTCACACGATGGGTCAAATGGAACCAAAAGGATGAGACGTCACACAAGTGCAATGCCCTTAAACGTTGTATCATCAGCAGGAAGTGTAAATGATGTTTTTAAACCATTGACCGGTGCAGAGACATCTGATCTTGAGTCAACTGCAACATCTAGCGTCAAGAGGCCCCGGATTGAGGCCAATCATGTTCTTCTGGAAGAAATAAGGGAAATAAACCAACGCCTGATTGACACAGTGGTGGTAATTAGTGATGAAGTAGTTGATCCAAGTGCTTTAGCGGCTGCTGGTGATGGCAGCGATGGAACAATTGTGAAGTGCTCTTTTAGTGCTGTGGCTCTCAGTCCCAGCTTAAAATCCCAATACACTTCTGCACAAATGTCCCCAATTCAGCCTCTACGGTTGCTTGTTCCTACAAATTATCCGAACTGTTCCCCAATACTCTTAGACAAGTTTCCTGTTGAAGTCAGCAAGGAATATGAAGACCTTTCAATAAAGGCCAAGTCCAGATTTAGCATATCGTTGCGAAACCTTTCGCAGCCAATGTCGCTTGGGGACATAGCAAGAACTTGGGATGTCTGTGCTCGTGCTGTTGTTTCCGAATACGCTCAGCAGAGCGGTGGTGGCAGCTTCTGTTCGAAGTATGGGGCTTGGGAGAACTGTTTGAGTGCTGCATGATTTGAAAAATCCATGGAATGGATGTTCGCGAACCATCTCGAGGTATTTCCGGCAGGCGAAATGACGAGACCAGCTCTGCTTGCTTAGGGAAGACAAGGCTGCCTATTTAAATAATGTATCATAGCATATAATTATTCCTCTGTGAAGCATGGAGGTAGTTTAATCAAATGGCATGGCTAATTAAGTTGTTTGACTGCCACGATGGATTCGTTTGTTTGTGAAAACTTTGAATGCCTCTTTTGGCTATATGTCTGTAAATCGTAAGAAGGGCGGACTGTAAAAAGGAAATCCTTGATATGTTCATTAAATGCATAAATTTATGCCTGAAGCTAGCGAGAACTTTTTGGTTGAAAAGCTCT

Coding sequence (CDS)

ATGGATTCGAGTAATTGGAGGCCTGCTCAAGGTGGAGAATCCGGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCACGGCATCGAATAGTCAACAAGATAATGGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCATGAGGGATTGAGTGAGCTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTACACCGCCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAAGATGCTTACTATGGAAACCAAATCTCAGACCACCGCATTACCATCCAATTCTATGGTGCCTACCAATAAGCCTCTAGATTCTACATCACAGAGCATGCAGTCTCAAGTTCTAAATCAAGGGCCATCAATGTCTGGCCCAATGTCTTCCAATCAACCTCAGCCACGCCAGCAATTACTCTCGCAGAGCATCCAAAATAATATTGCTTCTCAGAGTTCGTCCAGCTTACCTTCGTCAGTACCTCCTGTTGCGGGATTGGCATCAGCTCCAATGGCGAACATAGGTGGCCAGAATCCAAGCATGCAAAATGTATCTGGAGTTCCACAGAGTTCTGTTGGGAATGCTATGGGTCAAGGGGTTTCTACTAATGTATTTACCAACTCTCAGAGGCCAATACAAGGAAGACAAGTGGTTTCCCAACAGCAGCAGCAACAGCAGCAGTCACAAAGCCAGCAGCAACAGTTATTTTTTCAGCAACAACATTTACAGCAGCAGATTATGAAGCAGAAGTATCAGCAGGGAAGTATGCCACACCAACTTATGCAATCTCACATCCCACAACAGCAAACGAATCTAATGGCACCGAATCAACTCCCATCGTCTCAGCAATCTGTTATGCAACCTTCGCTCTCGAATCTTCAGCAAAACCAGCAATCTTCCATTCAACAGCCCACTCAATCCATGCTTCAGCAACCTCCACAGCCAGTTCTAAGGCAGCAGCAACAGTCCCAACAACATTCTCTCCTGCATCAGCAGCCCACAATGTCACAGCAGGCGAGCTTGTCTTCACAGCAGCAACAACAGCTAATTAATCAACAATCTAATTCTTCAAACATGCAGCAGAATTCACTAATACAAAACAGTGTTGGGGACATGCAGCAGCAGCTGCCACAGCAATCAAGGTCGCATGGGCAGCAGAGCAATCTATCAAACATGCAGACTCCACCATCGCAGCAGCAGCAGCAGCAGCAGCAGTTAATGAATCAGCAAAGCAGCCTATCAAATTTGCAGCAGCCGCAGTTAGGACCTCAAAGTAATGTTTCTGGACTACAGCAACAACAGATGCATGGTACTCAGTCAGGTAACTCAAACATGCAATCAAATCAGCACGGTGTGCATATGATGCAACAGAACAAGGTTCAAATGCAGCAACAACCTCCACAAAATCCATCGAATTTGTTGTCAACGCAAGGTCAGCAAGGACAACTTCAATCATCCCAACAGTTGATGTCACAGATTCCGTTGCAGTCCGCACAAGTCCAACAACAGGTGTCTTTACAGCAGCAGCAGCAGCAGCAGCCGCAGTCAAATACCTTGTCACATGAGCTCCAACAAAGGCTTCAAGCTGGAGGTCAAGCTCCAGGCCCCTTACTTCAATCACAGAATGTAATGGATCAGCAAAAGCAGTTGTATCATCCACAAAGGGTCCTTCCAGAGACATCATCAACATCTTTAGATTCCACGGCTCAGACAGGACAAGCTAATGGTGGGGATTGGCAAGAGGAGATTTATCAGAAGATTAAATCTATGAAGGAGTTGTACCTTTTTGAACTGAAAGAAATGTATCAGAAAATTCTTCCAAAAGTGCATCAGTTTGACAGCCTTCCGCAACAACCAAAGTCAGAGCAGCTAAATAAGCTAAGGGCATTTAGGGTGATTTTGGAACGCCTTATAGCGTTCTTACAGGTTCCAAAGAATAATATTGTGATTGGATTTAAAGATAAGATAGGCCATTACGAGAAGCAGATTGTTAGTTTCTTAAACTCGAACAGGCCAAGAAATTCAGTGTCTACACTGCAGCAAGGACAGCTCCCTGCCTCTCACATGCAATCTATGCAGCAGTCACAATCACAGATGACTCCGTTACAGTCGCCCGAAAATCAAATCAATCCCCAACTGCATTCTGCAAACATGCAAGGTTCCGTGGCTCCGGTGCAGCAGAACAATATGAACAATATGAACAATATGCAACATAATTCTCTTCCAACTTTTTCAGGATCAGCACCACAACAGAACATGACGATTCCGATGCAGCCGAGTTCCAGTTTGGAATCAGGACAAGGGAATTCACTGAGCTCGTTGCAGCAGGCGACATCCCCTCAAGTTACCCAAAATTCTTCCCCACAGGTCGACCAACAAAATATGTTTTCATCCATGAACAGAATTGGAACACCTTTGCAATCTGCGAGCTCCCCTTTTGTTGTCCCATCTCCTTCAACGCCTCTGGCTCCATCTCCAATGCCTGGTGATTCTGAAAAACCTACTTCTGCTGTCTCGTCACTTCCAAATGCTGGGAATACTGGACAACAAATGAATGTGTCTGGGGCACAAGCCCCATCTCTTGCCATTGGCACCCCTGGGATATCTGCCTCACCATTGCTAGCTGAGTTTAGTGGTACAGATGGCGCTTATGCCATTGCATTACCAACTGTTTCCGGCAAATCAAGTGTTACAGAGCAGCCTCTTGAACGCTTAATTAAAGCGGTTAAATCAATGTCACCTAAAGCTTTGAATGCTTCTGTCAGTGGCATCGGATCAGTTGTCAGTATGATTGATAGGATAGCCGGCTCAGCCCCCGGTAATGGATCGAGAGCTGCAGTTGGGGAGGATCTGGTTGCCATGACTAAATGTCGGCTGCAAGCAAGAAATTTTGTTTCACACGATGGGTCAAATGGAACCAAAAGGATGAGACGTCACACAAGTGCAATGCCCTTAAACGTTGTATCATCAGCAGGAAGTGTAAATGATGTTTTTAAACCATTGACCGGTGCAGAGACATCTGATCTTGAGTCAACTGCAACATCTAGCGTCAAGAGGCCCCGGATTGAGGCCAATCATGTTCTTCTGGAAGAAATAAGGGAAATAAACCAACGCCTGATTGACACAGTGGTGGTAATTAGTGATGAAGTAGTTGATCCAAGTGCTTTAGCGGCTGCTGGTGATGGCAGCGATGGAACAATTGTGAAGTGCTCTTTTAGTGCTGTGGCTCTCAGTCCCAGCTTAAAATCCCAATACACTTCTGCACAAATGTCCCCAATTCAGCCTCTACGGTTGCTTGTTCCTACAAATTATCCGAACTGTTCCCCAATACTCTTAGACAAGTTTCCTGTTGAAGTCAGCAAGGAATATGAAGACCTTTCAATAAAGGCCAAGTCCAGATTTAGCATATCGTTGCGAAACCTTTCGCAGCCAATGTCGCTTGGGGACATAGCAAGAACTTGGGATGTCTGTGCTCGTGCTGTTGTTTCCGAATACGCTCAGCAGAGCGGTGGTGGCAGCTTCTGTTCGAAGTATGGGGCTTGGGAGAACTGTTTGAGTGCTGCATGA

Protein sequence

MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIAVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQVLNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFFQQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQQSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSSNMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIEANHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAGDGSDGTIVKCSFSAVALSPSLKSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARAVVSEYAQQSGGGSFCSKYGAWENCLSAA
Homology
BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)

HSP 1 Score: 942.6 bits (2435), Expect = 4.4e-273
Identity = 688/1375 (50.04%), Postives = 855/1375 (62.18%), Query Frame = 0

Query: 1    MDSSNWRPA-QGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKI 60
            MD++NWRP+   GE  +D GDWR+QL PDSR +IVNKIMETLK+HLP SG EG++ELR+I
Sbjct: 1    MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60

Query: 61   AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQ 120
            A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ  A  S ++     P  +   S+ S 
Sbjct: 61   AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAI-----PAANNGTSIDSI 120

Query: 121  VLNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIAS--QSSSSLPSSVPPVAGLASAPMANI 180
              NQG  + G +S+NQ Q  Q LLSQ++QNN AS    S++LPSS+PPV+ + +    ++
Sbjct: 121  PTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNNTTSV 180

Query: 181  GGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQ 240
              QN +MQNV+G+ Q S G     G+S+N+F+  QR + GR            S  QQQQ
Sbjct: 181  VNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGR--------PHAMSSQQQQQ 240

Query: 241  LFFQQQHLQQQIMKQKYQQGSM--PHQLMQSHIPQQQTNLMAPNQLPSSQQ-----SVMQ 300
             +  QQ LQQQ++KQ +Q G++  P+ L+ SHI QQQ N++ PNQL SSQQ     S  Q
Sbjct: 241  PYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTSATQ 300

Query: 301  PS------LSNLQQNQQS----SIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQ 360
            PS      L  L  NQQS    S QQ TQSML+Q    +LRQ  QSQQ S +HQQ +   
Sbjct: 301  PSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLP 360

Query: 361  QASLSSQQQQ--QLINQQ-SNSSNMQQNSLI-QNSVGDMQQQLPQQSRSHGQQSNLSN-- 420
            Q S+S  QQQ  QL+ QQ +NSS +QQ  ++ Q+ VGDMQQQ   Q R   QQ+N+ N  
Sbjct: 361  QQSISPLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQQ--HQQRLLNQQNNVMNIQ 420

Query: 421  --------MQTPPSQQQQQ---QQQLMNQQSSLSNLQQPQLGPQSNVSGLQ--QQQMHGT 480
                    +Q P  QQ+QQ   QQQLM+QQ+SL    Q  LG QSNV+GLQ  QQQM  +
Sbjct: 421  QQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQQMLNS 480

Query: 481  QSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSA 540
            Q GNS++Q+NQH VHM+ Q  V + Q+  Q    L S+QGQQ Q Q SQQ   Q+  Q  
Sbjct: 481  QVGNSSLQNNQHSVHMLSQPTVGL-QRTHQAGHGLYSSQGQQSQNQPSQQ---QMMPQLQ 540

Query: 541  QVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP 600
               QQ+ LQQ      Q N L  ++QQRLQA GQ  G LL  QNV+DQQ+QLY  QR LP
Sbjct: 541  SHHQQLGLQQ------QPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600

Query: 601  ETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQ 660
            E  S+SLDSTAQT  ANGGDWQEE+YQKIKSMKE YL +L E+YQ++  K+ Q DS+PQQ
Sbjct: 601  EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660

Query: 661  PKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVST 720
             +S+QL KLR F+ +LER+I FL V K+NI+   KDK+ +YEKQI+ FLN +RPR  V  
Sbjct: 661  QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720

Query: 721  LQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMNNMNNMQH 780
             QQGQLP S MQ MQQ QSQ    QS +NQ NPQ+ S +MQG+    QQ++M NM +   
Sbjct: 721  -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780

Query: 781  NSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSS------------------------- 840
            +S P    SAPQQN+   + P+SSLESGQGN+L++                         
Sbjct: 781  SSRP--GVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQ 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  SGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQMQQQQLQARQQQQQQQL 900

Query: 901  ---------------------------------------------------------LQQ 960
                                                                     L Q
Sbjct: 901  QARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSMQGQRANYPLQQLKPGAVSSPQLLQ 960

Query: 961  ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSP-STPLAPSPMPGDSEKPT 1020
              SPQ++Q+ SPQVDQ+N   ++N++GTPLQ A+SPFVVPSP STPLAPSPM  DSEKP 
Sbjct: 961  GASPQMSQHLSPQVDQKN---TVNKMGTPLQPANSPFVVPSPSSTPLAPSPMQVDSEKPG 1020

Query: 1021 SAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKS 1080
            S+  S+ N     QQ         SLAIGTPGISASPLL EF+  DG    +    SGK 
Sbjct: 1021 SSSLSMGNIAR--QQATGMQGVVQSLAIGTPGISASPLLQEFTSPDGNILNSSTITSGKP 1080

Query: 1081 SVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMT 1140
            S TE P+ERLI+AVKS+SP+AL+++VS IGSVVSM+DRIAGSAPGNGSRA+VGEDLVAMT
Sbjct: 1081 SATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMT 1140

Query: 1141 KCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATS 1192
            KCRLQARNF++ +G   TK+M+RHT+AMPL+V S  GSV D +K   G+ETSDLESTATS
Sbjct: 1141 KCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATS 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match: Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 7.0e-77
Identity = 296/868 (34.10%), Postives = 429/868 (49.42%), Query Frame = 0

Query: 401  QQQQQQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQ 460
            Q++Q+Q+QL+NQ   L+NL      P S  +   QQ   G    +S+ Q+N   +H M Q
Sbjct: 156  QKRQEQEQLINQ---LTNL------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQ 215

Query: 461  NKVQMQQQPPQNPSNLLSTQGQQ-GQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQS 520
             K  +Q            T+GQQ GQ Q         P+ S Q +QQ  +    QQ PQ+
Sbjct: 216  QKNNLQSM----------TRGQQVGQSQ---------PMMSQQYRQQYPM----QQDPQN 275

Query: 521  NTLSHELQ--QRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP-----ETSSTSLDSTA 580
              L   L   Q      QA   L Q+QN+ DQQ Q    +R  P          S DST 
Sbjct: 276  RNLQKHLDFVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTG 335

Query: 581  QTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQ-LNKLR 640
            +T   N G+WQEE YQKIK +KE+ L  L  M+Q++  K+ + +SLP QP   Q + KL+
Sbjct: 336  KTVNVNAGNWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLK 395

Query: 641  AFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASH 700
            A ++ +E L+ FL V ++++    +DK   YE  I+ F  S       +  QQGQ P S 
Sbjct: 396  AGKLSMEHLMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFPPSQ 455

Query: 701  ------------MQSMQQSQSQMTPLQSPEN------QINPQLHSAN------MQGSV-- 760
                         QS+ + Q +   + S +N      QI P+L   +        G+V  
Sbjct: 456  TAMQTQSPQVHVSQSLYKEQRRSRLMPSSQNEASSLLQIRPKLDPRDENIIMASSGNVML 515

Query: 761  APVQQN------NMNNMNNMQ------HNSL---PTFSGSAPQQNMTIPMQP-------- 820
              V+QN      N++++ ++Q      H  +       G+   Q  T  M          
Sbjct: 516  PSVKQNPRAVNTNISSVQSLQKQKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVN 575

Query: 821  ------SSSLESGQGNSLSSLQQATSPQVTQNSSPQ-VDQQNMFSSMNRIGTPLQSASSP 880
                     + S Q          +S Q+  +SSPQ VDQ  + +++N+ GTPL S+ S 
Sbjct: 576  IKARLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSA 635

Query: 881  FVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASP 940
            FV P      APSP+PGDSE P S  S +         ++ S            G   +P
Sbjct: 636  FVAP------APSPVPGDSEMPISVESPVSGVDEINSTLDSSSKL---------GTQETP 695

Query: 941  LLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMID 1000
            LL                V     +TE+P++RLIKA ++ SPK+L  SVS I SV+SM+D
Sbjct: 696  LL---------------FVPPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVD 755

Query: 1001 RIAGSAPGN-GSRAAVGEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSA 1060
             I GS P + GSRA +GEDL   T      RNF +H+ +N +KRM+R  + +P ++ S  
Sbjct: 756  MIGGSFPSSGGSRAGLGEDLSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQI 815

Query: 1061 GSVNDVFKPLTGAETSDLESTATSSVKRPRIEANHVLLEEIREINQRLIDTVVVISDEVV 1120
                D ++ L+  E S++ ST +S +K   I   + LL+EI+E N RL++TVV I DE  
Sbjct: 816  ----DSYEQLSSLE-SEVVSTTSSGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE-- 875

Query: 1121 DPSALAAAGDGSDGTIVKCSFSAVALSPSLKSQYTSAQM----------SPIQPLRLLVP 1180
                       S GTIV C+++ VALS + K  Y S ++          + IQPLRLL P
Sbjct: 876  ----------DSLGTIVTCTYAPVALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFP 935

Query: 1181 TNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARA 1192
             +YP  SPI+L++   + S  +YEDLS + +SRFS+S++  S+P     IA+TW+ CARA
Sbjct: 936  MDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARA 935

BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match: F4I169 (Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis thaliana OX=3702 GN=MED15B PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.0e-33
Identity = 121/381 (31.76%), Postives = 169/381 (44.36%), Query Frame = 0

Query: 595 ELYLFELKEMYQKILPKVHQFDSLP-QQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVI 654
           +++  +L E+YQ++  K+ Q DSL  Q+ +S+Q  KL+  + +LE ++ FL + K+NI  
Sbjct: 10  QIHQRDLNEIYQRVAAKLQQEDSLSHQKQRSDQFEKLKRGKTVLEGMLRFLSLSKSNIKP 69

Query: 655 GFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQIN 714
             KD + + +  I++FLN    R    T+Q+ QL  S +Q MQQ  SQ    QS ++Q  
Sbjct: 70  DLKDSMDYRKNNIMNFLNMQSLR---KTVQKLQLTKSEIQPMQQPLSQTVQDQSHDDQTT 129

Query: 715 PQLHSANMQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNS 774
            Q+ S +MQG+ + VQQ                                           
Sbjct: 130 LQMQSMSMQGAGSRVQQ------------------------------------------- 189

Query: 775 LSSLQQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGD 834
                                                                       
Sbjct: 190 ------------------------------------------------------------ 249

Query: 835 SEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPT 894
                                 +      SL IGTPGISASPLL E +  DG     L +
Sbjct: 250 ----------------------IRQGVLQSLEIGTPGISASPLLPELTSPDGNIINPLTS 262

Query: 895 VSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGED 954
             GKSS TE P+ERLI+A+KS+SP+AL+++V  I SVVSM+DRIAGS PG GSRA+ G D
Sbjct: 310 TCGKSSATELPIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVD 262

Query: 955 LVAMTKCRLQARNFVSHDGSN 975
           LVAMTKC LQ RNF++ DG +
Sbjct: 370 LVAMTKCHLQERNFMTQDGDH 262

BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match: XP_023529243.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2062 bits (5342), Expect = 0.0
Identity = 1191/1376 (86.56%), Postives = 1191/1376 (86.56%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
            MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ 
Sbjct: 721  MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQV 780

Query: 781  ------------------------------------------------------------ 840
                                                                        
Sbjct: 781  GAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQQPQLHQQQSQLQQQGKQ 900

Query: 901  ------------------------------------------------------------ 960
                                                                        
Sbjct: 901  QLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISP 960

Query: 961  ----ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
                ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE
Sbjct: 961  PIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020

Query: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
            KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS
Sbjct: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080

Query: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
            GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV
Sbjct: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140

Query: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1191
            AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST
Sbjct: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1200

BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match: XP_023529242.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2057 bits (5330), Expect = 0.0
Identity = 1191/1377 (86.49%), Postives = 1191/1377 (86.49%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
            MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ 
Sbjct: 721  MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQV 780

Query: 781  ------------------------------------------------------------ 840
                                                                        
Sbjct: 781  GAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQQPQLHQQQSQLQQQGKQ 900

Query: 901  ------------------------------------------------------------ 960
                                                                        
Sbjct: 901  QLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISP 960

Query: 961  ----ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
                ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE
Sbjct: 961  PIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020

Query: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
            KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS
Sbjct: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080

Query: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
            GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV
Sbjct: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140

Query: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1191
            AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST
Sbjct: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1200

BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match: KAG7022562.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2031 bits (5261), Expect = 0.0
Identity = 1178/1367 (86.17%), Postives = 1184/1367 (86.61%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ--LMNQQSSLSN 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ  LMNQQSSLSN
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQLMNQQSSLSN 420

Query: 421  LQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS 480
            +QQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS
Sbjct: 421  MQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS 480

Query: 481  TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPG 540
            TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQ  PQSNTLSHELQQRLQAGGQAPG
Sbjct: 481  TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQ--PQSNTLSHELQQRLQAGGQAPG 540

Query: 541  PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL 600
            PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL
Sbjct: 541  PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL 600

Query: 601  FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK 660
            FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK
Sbjct: 601  FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK 660

Query: 661  IGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHS 720
            IGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQS+QQSQSQMTPLQSPENQINPQLHS
Sbjct: 661  IGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSIQQSQSQMTPLQSPENQINPQLHS 720

Query: 721  ANMQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLS 780
            ANMQGSVAPVQQNNMNNMNNM   QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLS
Sbjct: 721  ANMQGSVAPVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLS 780

Query: 781  SLQQ-------------------------------------------------------- 840
            SLQQ                                                        
Sbjct: 781  SLQQVGAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQ 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAH 900

Query: 901  -------------------------------------------------------ATSPQ 960
                                                                   ATSPQ
Sbjct: 901  QMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQ 960

Query: 961  VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL 1020
            VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL
Sbjct: 961  VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL 1020

Query: 1021 PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP 1080
            PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP
Sbjct: 1021 PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP 1080

Query: 1081 LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA 1140
            LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA
Sbjct: 1081 LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA 1140

Query: 1141 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1191
            RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR
Sbjct: 1141 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1200

BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match: XP_022927758.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 2029 bits (5257), Expect = 0.0
Identity = 1177/1365 (86.23%), Postives = 1182/1365 (86.59%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ  LMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI 
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
            MQGSVA VQQNNMNNMNNM   QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721  MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780

Query: 781  QQ---------------------------------------------------------- 840
            QQ                                                          
Sbjct: 781  QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900

Query: 901  -----------------------------------------------------ATSPQVT 960
                                                                 ATSPQVT
Sbjct: 901  SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960

Query: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
            QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020

Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
            AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080

Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
            RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140

Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
            FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200

BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match: XP_022927757.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 2024 bits (5245), Expect = 0.0
Identity = 1177/1366 (86.16%), Postives = 1182/1366 (86.53%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ  LMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI 
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
            MQGSVA VQQNNMNNMNNM   QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721  MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780

Query: 781  QQ---------------------------------------------------------- 840
            QQ                                                          
Sbjct: 781  QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900

Query: 901  -----------------------------------------------------ATSPQVT 960
                                                                 ATSPQVT
Sbjct: 901  SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960

Query: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
            QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020

Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
            AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080

Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
            RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140

Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
            FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match: A0A6J1ELX0 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)

HSP 1 Score: 2029 bits (5257), Expect = 0.0
Identity = 1177/1365 (86.23%), Postives = 1182/1365 (86.59%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ  LMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI 
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
            MQGSVA VQQNNMNNMNNM   QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721  MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780

Query: 781  QQ---------------------------------------------------------- 840
            QQ                                                          
Sbjct: 781  QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900

Query: 901  -----------------------------------------------------ATSPQVT 960
                                                                 ATSPQVT
Sbjct: 901  SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960

Query: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
            QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020

Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
            AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080

Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
            RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140

Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
            FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match: A0A6J1EI34 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)

HSP 1 Score: 2024 bits (5245), Expect = 0.0
Identity = 1177/1366 (86.16%), Postives = 1182/1366 (86.53%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ  LMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI 
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
            MQGSVA VQQNNMNNMNNM   QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721  MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780

Query: 781  QQ---------------------------------------------------------- 840
            QQ                                                          
Sbjct: 781  QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900

Query: 901  -----------------------------------------------------ATSPQVT 960
                                                                 ATSPQVT
Sbjct: 901  SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960

Query: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
            QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961  QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020

Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
            AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080

Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
            RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140

Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
            FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match: A0A6J1JM75 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)

HSP 1 Score: 2019 bits (5230), Expect = 0.0
Identity = 1173/1371 (85.56%), Postives = 1179/1371 (86.00%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDS+NWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIY AATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQK+QQGSMPHQLMQSHIPQQQTNLM PNQL SSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ---LMNQQSSLS 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ   LMNQQSSLS
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQQLMNQQSSLS 420

Query: 421  NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
            NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL
Sbjct: 421  NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480

Query: 481  STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAP 540
            STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ    PQSNTLSHELQQRLQAGGQAP
Sbjct: 481  STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ----PQSNTLSHELQQRLQAGGQAP 540

Query: 541  GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
            GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY
Sbjct: 541  GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600

Query: 601  LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
            LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD
Sbjct: 601  LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660

Query: 661  KIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
            KIGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH
Sbjct: 661  KIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720

Query: 721  SANMQGSVAPVQQNNMNNMNNM------QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQG 780
            SANMQGSVAPVQQNNMNNMNNM      QHNSLPTFSGSAPQQNMTIPMQP SSLESGQG
Sbjct: 721  SANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQG 780

Query: 781  NSLSSLQQ---------------------------------------------------- 840
            NSLSSLQQ                                                    
Sbjct: 781  NSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTNILQHQHMKQ 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQ 900

Query: 901  -----------------------------------------------------------A 960
                                                                       A
Sbjct: 901  MQAHQMSHLNQIEINDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQA 960

Query: 961  TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
            TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA
Sbjct: 961  TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020

Query: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSV 1080
            VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSS 
Sbjct: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSD 1080

Query: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
            TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC
Sbjct: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140

Query: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1191
            RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV
Sbjct: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match: A0A6J1JMY4 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)

HSP 1 Score: 2014 bits (5218), Expect = 0.0
Identity = 1173/1372 (85.50%), Postives = 1179/1372 (85.93%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDS+NWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIY AATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQK+QQGSMPHQLMQSHIPQQQTNLM PNQL SSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ---LMNQQSSLS 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ   LMNQQSSLS
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQQLMNQQSSLS 420

Query: 421  NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
            NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL
Sbjct: 421  NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480

Query: 481  STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAP 540
            STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ    PQSNTLSHELQQRLQAGGQAP
Sbjct: 481  STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ----PQSNTLSHELQQRLQAGGQAP 540

Query: 541  GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
            GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY
Sbjct: 541  GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600

Query: 601  LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
            LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD
Sbjct: 601  LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660

Query: 661  KIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
            KIGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH
Sbjct: 661  KIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720

Query: 721  SANMQGSVAPVQQNNMNNMNNM------QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQG 780
            SANMQGSVAPVQQNNMNNMNNM      QHNSLPTFSGSAPQQNMTIPMQP SSLESGQG
Sbjct: 721  SANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQG 780

Query: 781  NSLSSLQQ---------------------------------------------------- 840
            NSLSSLQQ                                                    
Sbjct: 781  NSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTNILQHQHMKQ 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQ 900

Query: 901  -----------------------------------------------------------A 960
                                                                       A
Sbjct: 901  MQAHQMSHLNQIEINDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQA 960

Query: 961  TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
            TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA
Sbjct: 961  TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020

Query: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSV 1080
            VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSS 
Sbjct: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSD 1080

Query: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
            TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC
Sbjct: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140

Query: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1191
            RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV
Sbjct: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1200

BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match: A0A6J1EIW4 (mediator of RNA polymerase II transcription subunit 15a-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)

HSP 1 Score: 1970 bits (5103), Expect = 0.0
Identity = 1152/1363 (84.52%), Postives = 1157/1363 (84.89%), Query Frame = 0

Query: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
            MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1    MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60

Query: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
            VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61   VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120

Query: 121  LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
            LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121  LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180

Query: 181  NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
            NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181  NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240

Query: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
            QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241  QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300

Query: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
            QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301  QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360

Query: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
            NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ  LMNQQSSLSNLQ
Sbjct: 361  NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420

Query: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
            QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421  QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480

Query: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
            GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481  GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540

Query: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
            LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541  LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600

Query: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
            LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI 
Sbjct: 601  LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660

Query: 661  HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
            HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661  HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720

Query: 721  MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
            MQGS                          APQQNMTIPMQP SSLESGQGNSLSSLQQ 
Sbjct: 721  MQGS--------------------------APQQNMTIPMQPGSSLESGQGNSLSSLQQV 780

Query: 781  ------------------------------------------------------------ 840
                                                                        
Sbjct: 781  GAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQMSHL 900

Query: 901  --------------------------------------------------ATSPQVTQNS 960
                                                              ATSPQVTQNS
Sbjct: 901  NQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVTQNS 960

Query: 961  SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN 1020
            SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN
Sbjct: 961  SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN 1020

Query: 1021 TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI 1080
            TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI
Sbjct: 1021 TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI 1080

Query: 1081 KAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS 1140
            KAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS
Sbjct: 1081 KAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS 1140

Query: 1141 HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIEANH 1191
            HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIEA+H
Sbjct: 1141 HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIEASH 1200

BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match: AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )

HSP 1 Score: 942.6 bits (2435), Expect = 3.1e-274
Identity = 688/1375 (50.04%), Postives = 855/1375 (62.18%), Query Frame = 0

Query: 1    MDSSNWRPA-QGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKI 60
            MD++NWRP+   GE  +D GDWR+QL PDSR +IVNKIMETLK+HLP SG EG++ELR+I
Sbjct: 1    MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60

Query: 61   AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQ 120
            A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ  A  S ++     P  +   S+ S 
Sbjct: 61   AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAI-----PAANNGTSIDSI 120

Query: 121  VLNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIAS--QSSSSLPSSVPPVAGLASAPMANI 180
              NQG  + G +S+NQ Q  Q LLSQ++QNN AS    S++LPSS+PPV+ + +    ++
Sbjct: 121  PTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNNTTSV 180

Query: 181  GGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQ 240
              QN +MQNV+G+ Q S G     G+S+N+F+  QR + GR            S  QQQQ
Sbjct: 181  VNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGR--------PHAMSSQQQQQ 240

Query: 241  LFFQQQHLQQQIMKQKYQQGSM--PHQLMQSHIPQQQTNLMAPNQLPSSQQ-----SVMQ 300
             +  QQ LQQQ++KQ +Q G++  P+ L+ SHI QQQ N++ PNQL SSQQ     S  Q
Sbjct: 241  PYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTSATQ 300

Query: 301  PS------LSNLQQNQQS----SIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQ 360
            PS      L  L  NQQS    S QQ TQSML+Q    +LRQ  QSQQ S +HQQ +   
Sbjct: 301  PSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLP 360

Query: 361  QASLSSQQQQ--QLINQQ-SNSSNMQQNSLI-QNSVGDMQQQLPQQSRSHGQQSNLSN-- 420
            Q S+S  QQQ  QL+ QQ +NSS +QQ  ++ Q+ VGDMQQQ   Q R   QQ+N+ N  
Sbjct: 361  QQSISPLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQQ--HQQRLLNQQNNVMNIQ 420

Query: 421  --------MQTPPSQQQQQ---QQQLMNQQSSLSNLQQPQLGPQSNVSGLQ--QQQMHGT 480
                    +Q P  QQ+QQ   QQQLM+QQ+SL    Q  LG QSNV+GLQ  QQQM  +
Sbjct: 421  QQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQQMLNS 480

Query: 481  QSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSA 540
            Q GNS++Q+NQH VHM+ Q  V + Q+  Q    L S+QGQQ Q Q SQQ   Q+  Q  
Sbjct: 481  QVGNSSLQNNQHSVHMLSQPTVGL-QRTHQAGHGLYSSQGQQSQNQPSQQ---QMMPQLQ 540

Query: 541  QVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP 600
               QQ+ LQQ      Q N L  ++QQRLQA GQ  G LL  QNV+DQQ+QLY  QR LP
Sbjct: 541  SHHQQLGLQQ------QPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600

Query: 601  ETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQ 660
            E  S+SLDSTAQT  ANGGDWQEE+YQKIKSMKE YL +L E+YQ++  K+ Q DS+PQQ
Sbjct: 601  EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660

Query: 661  PKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVST 720
             +S+QL KLR F+ +LER+I FL V K+NI+   KDK+ +YEKQI+ FLN +RPR  V  
Sbjct: 661  QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720

Query: 721  LQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMNNMNNMQH 780
             QQGQLP S MQ MQQ QSQ    QS +NQ NPQ+ S +MQG+    QQ++M NM +   
Sbjct: 721  -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780

Query: 781  NSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSS------------------------- 840
            +S P    SAPQQN+   + P+SSLESGQGN+L++                         
Sbjct: 781  SSRP--GVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQ 840

Query: 841  ------------------------------------------------------------ 900
                                                                        
Sbjct: 841  SGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQMQQQQLQARQQQQQQQL 900

Query: 901  ---------------------------------------------------------LQQ 960
                                                                     L Q
Sbjct: 901  QARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSMQGQRANYPLQQLKPGAVSSPQLLQ 960

Query: 961  ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSP-STPLAPSPMPGDSEKPT 1020
              SPQ++Q+ SPQVDQ+N   ++N++GTPLQ A+SPFVVPSP STPLAPSPM  DSEKP 
Sbjct: 961  GASPQMSQHLSPQVDQKN---TVNKMGTPLQPANSPFVVPSPSSTPLAPSPMQVDSEKPG 1020

Query: 1021 SAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKS 1080
            S+  S+ N     QQ         SLAIGTPGISASPLL EF+  DG    +    SGK 
Sbjct: 1021 SSSLSMGNIAR--QQATGMQGVVQSLAIGTPGISASPLLQEFTSPDGNILNSSTITSGKP 1080

Query: 1081 SVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMT 1140
            S TE P+ERLI+AVKS+SP+AL+++VS IGSVVSM+DRIAGSAPGNGSRA+VGEDLVAMT
Sbjct: 1081 SATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMT 1140

Query: 1141 KCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATS 1192
            KCRLQARNF++ +G   TK+M+RHT+AMPL+V S  GSV D +K   G+ETSDLESTATS
Sbjct: 1141 KCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATS 1200

BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match: AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )

HSP 1 Score: 291.6 bits (745), Expect = 2.9e-78
Identity = 244/708 (34.46%), Postives = 365/708 (51.55%), Query Frame = 0

Query: 543  SQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELK 602
            +++ +  QK ++    ++      S DST +T   N G+WQEE YQKIK +KE+ L  L 
Sbjct: 191  TKHSITDQKSVFDTTVLIMNIIVASQDSTGKTVNVNAGNWQEETYQKIKKLKEMCLPVLS 250

Query: 603  EMYQKILPKVHQFDSLPQQPKSEQ-LNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGH 662
             M+Q++  K+ + +SLP QP   Q + KL+A ++ +E L+ FL V ++++    +DK   
Sbjct: 251  LMHQRVAEKLRETESLPPQPMQAQWIEKLKAGKLSMEHLMFFLNVHRSSVSEKHRDKFSQ 310

Query: 663  YEKQIVSFLNSNRPRNSVSTLQQGQLPASH------------MQSMQQSQSQMTPLQSPE 722
            YE  I+ F  S       +  QQGQ P S              QS+ + Q +   + S +
Sbjct: 311  YEYHILKFTKSQTMVLRPTQQQQGQFPPSQTAMQTQSPQVHVSQSLYKEQRRSRLMPSSQ 370

Query: 723  N------QINPQLHSAN------MQGSV--APVQQN------NMNNMNNMQ------HNS 782
            N      QI P+L   +        G+V    V+QN      N++++ ++Q      H  
Sbjct: 371  NEASSLLQIRPKLDPRDENIIMASSGNVMLPSVKQNPRAVNTNISSVQSLQKQKRFHHRQ 430

Query: 783  L---PTFSGSAPQQNMTIPMQP--------------SSSLESGQGNSLSSLQQATSPQVT 842
            +       G+   Q  T  M                   + S Q          +S Q+ 
Sbjct: 431  MQQQQPQQGNHQHQMQTNEMNDVRMRERVNIKARLLEQQVSSSQRQVPKQESNVSSSQIQ 490

Query: 843  QNSSPQ-VDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLP 902
             +SSPQ VDQ  + +++N+ GTPL S+ S FV P      APSP+PGDSE P S  S + 
Sbjct: 491  NHSSPQLVDQHILPATINKTGTPLNSSGSAFVAP------APSPVPGDSEMPISVESPVS 550

Query: 903  NAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPL 962
                    ++ S            G   +PLL                V     +TE+P+
Sbjct: 551  GVDEINSTLDSSSKL---------GTQETPLL---------------FVPPPEPITERPI 610

Query: 963  ERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGN-GSRAAVGEDLVAMTKCRLQA 1022
            +RLIKA ++ SPK+L  SVS I SV+SM+D I GS P + GSRA +GEDL   T      
Sbjct: 611  DRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSERT------ 670

Query: 1023 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1082
            RNF +H+ +N +KRM+R  + +P ++ S      D ++ L+  E S++ ST +S +K   
Sbjct: 671  RNFTTHEETNLSKRMKRSINIVPPDMSSQI----DSYEQLSSLE-SEVVSTTSSGLKVNN 730

Query: 1083 IEANHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAGDGSDGTIVKCSFSAVALSPSL 1142
            I   + LL+EI+E N RL++TVV I DE             S GTIV C+++ VALS + 
Sbjct: 731  IAPGYALLQEIKETNGRLVETVVEICDE------------DSLGTIVTCTYAPVALSATF 790

Query: 1143 KSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRN 1192
            K  Y S +++ IQPLRLL P +YP  SPI+L++   + S  +YEDLS + +SRFS+S++ 
Sbjct: 791  KDHYKSGKIAQIQPLRLLFPMDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKE 845

BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match: AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )

HSP 1 Score: 290.8 bits (743), Expect = 4.9e-78
Identity = 296/868 (34.10%), Postives = 429/868 (49.42%), Query Frame = 0

Query: 401  QQQQQQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQ 460
            Q++Q+Q+QL+NQ   L+NL      P S  +   QQ   G    +S+ Q+N   +H M Q
Sbjct: 156  QKRQEQEQLINQ---LTNL------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQ 215

Query: 461  NKVQMQQQPPQNPSNLLSTQGQQ-GQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQS 520
             K  +Q            T+GQQ GQ Q         P+ S Q +QQ  +    QQ PQ+
Sbjct: 216  QKNNLQSM----------TRGQQVGQSQ---------PMMSQQYRQQYPM----QQDPQN 275

Query: 521  NTLSHELQ--QRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP-----ETSSTSLDSTA 580
              L   L   Q      QA   L Q+QN+ DQQ Q    +R  P          S DST 
Sbjct: 276  RNLQKHLDFVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTG 335

Query: 581  QTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQ-LNKLR 640
            +T   N G+WQEE YQKIK +KE+ L  L  M+Q++  K+ + +SLP QP   Q + KL+
Sbjct: 336  KTVNVNAGNWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLK 395

Query: 641  AFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASH 700
            A ++ +E L+ FL V ++++    +DK   YE  I+ F  S       +  QQGQ P S 
Sbjct: 396  AGKLSMEHLMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFPPSQ 455

Query: 701  ------------MQSMQQSQSQMTPLQSPEN------QINPQLHSAN------MQGSV-- 760
                         QS+ + Q +   + S +N      QI P+L   +        G+V  
Sbjct: 456  TAMQTQSPQVHVSQSLYKEQRRSRLMPSSQNEASSLLQIRPKLDPRDENIIMASSGNVML 515

Query: 761  APVQQN------NMNNMNNMQ------HNSL---PTFSGSAPQQNMTIPMQP-------- 820
              V+QN      N++++ ++Q      H  +       G+   Q  T  M          
Sbjct: 516  PSVKQNPRAVNTNISSVQSLQKQKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVN 575

Query: 821  ------SSSLESGQGNSLSSLQQATSPQVTQNSSPQ-VDQQNMFSSMNRIGTPLQSASSP 880
                     + S Q          +S Q+  +SSPQ VDQ  + +++N+ GTPL S+ S 
Sbjct: 576  IKARLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSA 635

Query: 881  FVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASP 940
            FV P      APSP+PGDSE P S  S +         ++ S            G   +P
Sbjct: 636  FVAP------APSPVPGDSEMPISVESPVSGVDEINSTLDSSSKL---------GTQETP 695

Query: 941  LLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMID 1000
            LL                V     +TE+P++RLIKA ++ SPK+L  SVS I SV+SM+D
Sbjct: 696  LL---------------FVPPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVD 755

Query: 1001 RIAGSAPGN-GSRAAVGEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSA 1060
             I GS P + GSRA +GEDL   T      RNF +H+ +N +KRM+R  + +P ++ S  
Sbjct: 756  MIGGSFPSSGGSRAGLGEDLSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQI 815

Query: 1061 GSVNDVFKPLTGAETSDLESTATSSVKRPRIEANHVLLEEIREINQRLIDTVVVISDEVV 1120
                D ++ L+  E S++ ST +S +K   I   + LL+EI+E N RL++TVV I DE  
Sbjct: 816  ----DSYEQLSSLE-SEVVSTTSSGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE-- 875

Query: 1121 DPSALAAAGDGSDGTIVKCSFSAVALSPSLKSQYTSAQM----------SPIQPLRLLVP 1180
                       S GTIV C+++ VALS + K  Y S ++          + IQPLRLL P
Sbjct: 876  ----------DSLGTIVTCTYAPVALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFP 935

Query: 1181 TNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARA 1192
             +YP  SPI+L++   + S  +YEDLS + +SRFS+S++  S+P     IA+TW+ CARA
Sbjct: 936  MDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARA 935

BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match: AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 5.7e-34
Identity = 121/381 (31.76%), Postives = 169/381 (44.36%), Query Frame = 0

Query: 595 ELYLFELKEMYQKILPKVHQFDSLP-QQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVI 654
           +++  +L E+YQ++  K+ Q DSL  Q+ +S+Q  KL+  + +LE ++ FL + K+NI  
Sbjct: 10  QIHQRDLNEIYQRVAAKLQQEDSLSHQKQRSDQFEKLKRGKTVLEGMLRFLSLSKSNIKP 69

Query: 655 GFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQIN 714
             KD + + +  I++FLN    R    T+Q+ QL  S +Q MQQ  SQ    QS ++Q  
Sbjct: 70  DLKDSMDYRKNNIMNFLNMQSLR---KTVQKLQLTKSEIQPMQQPLSQTVQDQSHDDQTT 129

Query: 715 PQLHSANMQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNS 774
            Q+ S +MQG+ + VQQ                                           
Sbjct: 130 LQMQSMSMQGAGSRVQQ------------------------------------------- 189

Query: 775 LSSLQQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGD 834
                                                                       
Sbjct: 190 ------------------------------------------------------------ 249

Query: 835 SEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPT 894
                                 +      SL IGTPGISASPLL E +  DG     L +
Sbjct: 250 ----------------------IRQGVLQSLEIGTPGISASPLLPELTSPDGNIINPLTS 262

Query: 895 VSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGED 954
             GKSS TE P+ERLI+A+KS+SP+AL+++V  I SVVSM+DRIAGS PG GSRA+ G D
Sbjct: 310 TCGKSSATELPIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVD 262

Query: 955 LVAMTKCRLQARNFVSHDGSN 975
           LVAMTKC LQ RNF++ DG +
Sbjct: 370 LVAMTKCHLQERNFMTQDGDH 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
F4I1714.4e-27350.04Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ... [more]
Q9SHV77.0e-7734.10Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ... [more]
F4I1698.0e-3331.76Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis ... [more]
Match NameE-valueIdentityDescription
XP_023529243.10.086.56mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbi... [more]
XP_023529242.10.086.49mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... [more]
KAG7022562.10.086.17Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argy... [more]
XP_022927758.10.086.23mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbi... [more]
XP_022927757.10.086.16mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... [more]
Match NameE-valueIdentityDescription
A0A6J1ELX00.086.23mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... [more]
A0A6J1EI340.086.16mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... [more]
A0A6J1JM750.085.56mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... [more]
A0A6J1JMY40.085.50mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... [more]
A0A6J1EIW40.084.52mediator of RNA polymerase II transcription subunit 15a-like isoform X3 OS=Cucur... [more]
Match NameE-valueIdentityDescription
AT1G15780.13.1e-27450.04unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G10440.22.9e-7834.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G10440.14.9e-7834.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15770.15.7e-3431.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036546Mediator complex subunit 15, KIX domainPFAMPF16987KIX_2coord: 18..96
e-value: 1.4E-36
score: 124.4
IPR036529Coactivator CBP, KIX domain superfamilyGENE3D1.10.246.20Coactivator CBP, KIX domaincoord: 20..97
e-value: 5.3E-23
score: 82.9
IPR036529Coactivator CBP, KIX domain superfamilySUPERFAMILY47040Kix domain of CBP (creb binding protein)coord: 19..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 729..793
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 835..858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..819
NoneNo IPR availablePANTHERPTHR33137:SF27OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATEDcoord: 777..1190
coord: 1..780
IPR044661Mediator of RNA polymerase II transcription subunit 15a/b/c-likePANTHERPTHR33137MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATEDcoord: 777..1190
coord: 1..780

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g06870.1Cp4.1LG04g06870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0031490 chromatin DNA binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003712 transcription coregulator activity