Homology
BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match:
F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)
HSP 1 Score: 942.6 bits (2435), Expect = 4.4e-273
Identity = 688/1375 (50.04%), Postives = 855/1375 (62.18%), Query Frame = 0
Query: 1 MDSSNWRPA-QGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKI 60
MD++NWRP+ GE +D GDWR+QL PDSR +IVNKIMETLK+HLP SG EG++ELR+I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 61 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQ 120
A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ A S ++ P + S+ S
Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAI-----PAANNGTSIDSI 120
Query: 121 VLNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIAS--QSSSSLPSSVPPVAGLASAPMANI 180
NQG + G +S+NQ Q Q LLSQ++QNN AS S++LPSS+PPV+ + + ++
Sbjct: 121 PTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNNTTSV 180
Query: 181 GGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQ 240
QN +MQNV+G+ Q S G G+S+N+F+ QR + GR S QQQQ
Sbjct: 181 VNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGR--------PHAMSSQQQQQ 240
Query: 241 LFFQQQHLQQQIMKQKYQQGSM--PHQLMQSHIPQQQTNLMAPNQLPSSQQ-----SVMQ 300
+ QQ LQQQ++KQ +Q G++ P+ L+ SHI QQQ N++ PNQL SSQQ S Q
Sbjct: 241 PYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTSATQ 300
Query: 301 PS------LSNLQQNQQS----SIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQ 360
PS L L NQQS S QQ TQSML+Q +LRQ QSQQ S +HQQ +
Sbjct: 301 PSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLP 360
Query: 361 QASLSSQQQQ--QLINQQ-SNSSNMQQNSLI-QNSVGDMQQQLPQQSRSHGQQSNLSN-- 420
Q S+S QQQ QL+ QQ +NSS +QQ ++ Q+ VGDMQQQ Q R QQ+N+ N
Sbjct: 361 QQSISPLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQQ--HQQRLLNQQNNVMNIQ 420
Query: 421 --------MQTPPSQQQQQ---QQQLMNQQSSLSNLQQPQLGPQSNVSGLQ--QQQMHGT 480
+Q P QQ+QQ QQQLM+QQ+SL Q LG QSNV+GLQ QQQM +
Sbjct: 421 QQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQQMLNS 480
Query: 481 QSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSA 540
Q GNS++Q+NQH VHM+ Q V + Q+ Q L S+QGQQ Q Q SQQ Q+ Q
Sbjct: 481 QVGNSSLQNNQHSVHMLSQPTVGL-QRTHQAGHGLYSSQGQQSQNQPSQQ---QMMPQLQ 540
Query: 541 QVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP 600
QQ+ LQQ Q N L ++QQRLQA GQ G LL QNV+DQQ+QLY QR LP
Sbjct: 541 SHHQQLGLQQ------QPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600
Query: 601 ETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQ 660
E S+SLDSTAQT ANGGDWQEE+YQKIKSMKE YL +L E+YQ++ K+ Q DS+PQQ
Sbjct: 601 EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660
Query: 661 PKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVST 720
+S+QL KLR F+ +LER+I FL V K+NI+ KDK+ +YEKQI+ FLN +RPR V
Sbjct: 661 QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720
Query: 721 LQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMNNMNNMQH 780
QQGQLP S MQ MQQ QSQ QS +NQ NPQ+ S +MQG+ QQ++M NM +
Sbjct: 721 -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780
Query: 781 NSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSS------------------------- 840
+S P SAPQQN+ + P+SSLESGQGN+L++
Sbjct: 781 SSRP--GVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQ 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 SGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQMQQQQLQARQQQQQQQL 900
Query: 901 ---------------------------------------------------------LQQ 960
L Q
Sbjct: 901 QARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSMQGQRANYPLQQLKPGAVSSPQLLQ 960
Query: 961 ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSP-STPLAPSPMPGDSEKPT 1020
SPQ++Q+ SPQVDQ+N ++N++GTPLQ A+SPFVVPSP STPLAPSPM DSEKP
Sbjct: 961 GASPQMSQHLSPQVDQKN---TVNKMGTPLQPANSPFVVPSPSSTPLAPSPMQVDSEKPG 1020
Query: 1021 SAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKS 1080
S+ S+ N QQ SLAIGTPGISASPLL EF+ DG + SGK
Sbjct: 1021 SSSLSMGNIAR--QQATGMQGVVQSLAIGTPGISASPLLQEFTSPDGNILNSSTITSGKP 1080
Query: 1081 SVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMT 1140
S TE P+ERLI+AVKS+SP+AL+++VS IGSVVSM+DRIAGSAPGNGSRA+VGEDLVAMT
Sbjct: 1081 SATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMT 1140
Query: 1141 KCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATS 1192
KCRLQARNF++ +G TK+M+RHT+AMPL+V S GSV D +K G+ETSDLESTATS
Sbjct: 1141 KCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATS 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match:
Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 7.0e-77
Identity = 296/868 (34.10%), Postives = 429/868 (49.42%), Query Frame = 0
Query: 401 QQQQQQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQ 460
Q++Q+Q+QL+NQ L+NL P S + QQ G +S+ Q+N +H M Q
Sbjct: 156 QKRQEQEQLINQ---LTNL------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQ 215
Query: 461 NKVQMQQQPPQNPSNLLSTQGQQ-GQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQS 520
K +Q T+GQQ GQ Q P+ S Q +QQ + QQ PQ+
Sbjct: 216 QKNNLQSM----------TRGQQVGQSQ---------PMMSQQYRQQYPM----QQDPQN 275
Query: 521 NTLSHELQ--QRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP-----ETSSTSLDSTA 580
L L Q QA L Q+QN+ DQQ Q +R P S DST
Sbjct: 276 RNLQKHLDFVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTG 335
Query: 581 QTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQ-LNKLR 640
+T N G+WQEE YQKIK +KE+ L L M+Q++ K+ + +SLP QP Q + KL+
Sbjct: 336 KTVNVNAGNWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLK 395
Query: 641 AFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASH 700
A ++ +E L+ FL V ++++ +DK YE I+ F S + QQGQ P S
Sbjct: 396 AGKLSMEHLMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFPPSQ 455
Query: 701 ------------MQSMQQSQSQMTPLQSPEN------QINPQLHSAN------MQGSV-- 760
QS+ + Q + + S +N QI P+L + G+V
Sbjct: 456 TAMQTQSPQVHVSQSLYKEQRRSRLMPSSQNEASSLLQIRPKLDPRDENIIMASSGNVML 515
Query: 761 APVQQN------NMNNMNNMQ------HNSL---PTFSGSAPQQNMTIPMQP-------- 820
V+QN N++++ ++Q H + G+ Q T M
Sbjct: 516 PSVKQNPRAVNTNISSVQSLQKQKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVN 575
Query: 821 ------SSSLESGQGNSLSSLQQATSPQVTQNSSPQ-VDQQNMFSSMNRIGTPLQSASSP 880
+ S Q +S Q+ +SSPQ VDQ + +++N+ GTPL S+ S
Sbjct: 576 IKARLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSA 635
Query: 881 FVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASP 940
FV P APSP+PGDSE P S S + ++ S G +P
Sbjct: 636 FVAP------APSPVPGDSEMPISVESPVSGVDEINSTLDSSSKL---------GTQETP 695
Query: 941 LLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMID 1000
LL V +TE+P++RLIKA ++ SPK+L SVS I SV+SM+D
Sbjct: 696 LL---------------FVPPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVD 755
Query: 1001 RIAGSAPGN-GSRAAVGEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSA 1060
I GS P + GSRA +GEDL T RNF +H+ +N +KRM+R + +P ++ S
Sbjct: 756 MIGGSFPSSGGSRAGLGEDLSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQI 815
Query: 1061 GSVNDVFKPLTGAETSDLESTATSSVKRPRIEANHVLLEEIREINQRLIDTVVVISDEVV 1120
D ++ L+ E S++ ST +S +K I + LL+EI+E N RL++TVV I DE
Sbjct: 816 ----DSYEQLSSLE-SEVVSTTSSGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE-- 875
Query: 1121 DPSALAAAGDGSDGTIVKCSFSAVALSPSLKSQYTSAQM----------SPIQPLRLLVP 1180
S GTIV C+++ VALS + K Y S ++ + IQPLRLL P
Sbjct: 876 ----------DSLGTIVTCTYAPVALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFP 935
Query: 1181 TNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARA 1192
+YP SPI+L++ + S +YEDLS + +SRFS+S++ S+P IA+TW+ CARA
Sbjct: 936 MDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARA 935
BLAST of Cp4.1LG04g06870 vs. ExPASy Swiss-Prot
Match:
F4I169 (Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis thaliana OX=3702 GN=MED15B PE=3 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 8.0e-33
Identity = 121/381 (31.76%), Postives = 169/381 (44.36%), Query Frame = 0
Query: 595 ELYLFELKEMYQKILPKVHQFDSLP-QQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVI 654
+++ +L E+YQ++ K+ Q DSL Q+ +S+Q KL+ + +LE ++ FL + K+NI
Sbjct: 10 QIHQRDLNEIYQRVAAKLQQEDSLSHQKQRSDQFEKLKRGKTVLEGMLRFLSLSKSNIKP 69
Query: 655 GFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQIN 714
KD + + + I++FLN R T+Q+ QL S +Q MQQ SQ QS ++Q
Sbjct: 70 DLKDSMDYRKNNIMNFLNMQSLR---KTVQKLQLTKSEIQPMQQPLSQTVQDQSHDDQTT 129
Query: 715 PQLHSANMQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNS 774
Q+ S +MQG+ + VQQ
Sbjct: 130 LQMQSMSMQGAGSRVQQ------------------------------------------- 189
Query: 775 LSSLQQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGD 834
Sbjct: 190 ------------------------------------------------------------ 249
Query: 835 SEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPT 894
+ SL IGTPGISASPLL E + DG L +
Sbjct: 250 ----------------------IRQGVLQSLEIGTPGISASPLLPELTSPDGNIINPLTS 262
Query: 895 VSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGED 954
GKSS TE P+ERLI+A+KS+SP+AL+++V I SVVSM+DRIAGS PG GSRA+ G D
Sbjct: 310 TCGKSSATELPIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVD 262
Query: 955 LVAMTKCRLQARNFVSHDGSN 975
LVAMTKC LQ RNF++ DG +
Sbjct: 370 LVAMTKCHLQERNFMTQDGDH 262
BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match:
XP_023529243.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2062 bits (5342), Expect = 0.0
Identity = 1191/1376 (86.56%), Postives = 1191/1376 (86.56%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ
Sbjct: 721 MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQV 780
Query: 781 ------------------------------------------------------------ 840
Sbjct: 781 GAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQQPQLHQQQSQLQQQGKQ 900
Query: 901 ------------------------------------------------------------ 960
Sbjct: 901 QLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISP 960
Query: 961 ----ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE
Sbjct: 961 PIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
Query: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS
Sbjct: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
Query: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV
Sbjct: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
Query: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1191
AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST
Sbjct: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1200
BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match:
XP_023529242.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2057 bits (5330), Expect = 0.0
Identity = 1191/1377 (86.49%), Postives = 1191/1377 (86.49%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ
Sbjct: 721 MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQV 780
Query: 781 ------------------------------------------------------------ 840
Sbjct: 781 GAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQQPQLHQQQSQLQQQGKQ 900
Query: 901 ------------------------------------------------------------ 960
Sbjct: 901 QLPTQMQAHQMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISP 960
Query: 961 ----ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE
Sbjct: 961 PIFQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSE 1020
Query: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS
Sbjct: 1021 KPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVS 1080
Query: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV
Sbjct: 1081 GKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLV 1140
Query: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1191
AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST
Sbjct: 1141 AMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLEST 1200
BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match:
KAG7022562.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2031 bits (5261), Expect = 0.0
Identity = 1178/1367 (86.17%), Postives = 1184/1367 (86.61%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ--LMNQQSSLSN 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ LMNQQSSLSN
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQLMNQQSSLSN 420
Query: 421 LQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS 480
+QQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS
Sbjct: 421 MQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLS 480
Query: 481 TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPG 540
TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQ PQSNTLSHELQQRLQAGGQAPG
Sbjct: 481 TQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQ--PQSNTLSHELQQRLQAGGQAPG 540
Query: 541 PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL 600
PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL
Sbjct: 541 PLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYL 600
Query: 601 FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK 660
FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK
Sbjct: 601 FELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDK 660
Query: 661 IGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHS 720
IGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQS+QQSQSQMTPLQSPENQINPQLHS
Sbjct: 661 IGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSIQQSQSQMTPLQSPENQINPQLHS 720
Query: 721 ANMQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLS 780
ANMQGSVAPVQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLS
Sbjct: 721 ANMQGSVAPVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLS 780
Query: 781 SLQQ-------------------------------------------------------- 840
SLQQ
Sbjct: 781 SLQQVGAVSLQQNPANSSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQ 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAH 900
Query: 901 -------------------------------------------------------ATSPQ 960
ATSPQ
Sbjct: 901 QMSHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQ 960
Query: 961 VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL 1020
VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL
Sbjct: 961 VTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSL 1020
Query: 1021 PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP 1080
PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP
Sbjct: 1021 PNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQP 1080
Query: 1081 LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA 1140
LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA
Sbjct: 1081 LERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQA 1140
Query: 1141 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1191
RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR
Sbjct: 1141 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1200
BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match:
XP_022927758.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 2029 bits (5257), Expect = 0.0
Identity = 1177/1365 (86.23%), Postives = 1182/1365 (86.59%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ LMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
MQGSVA VQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721 MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780
Query: 781 QQ---------------------------------------------------------- 840
QQ
Sbjct: 781 QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900
Query: 901 -----------------------------------------------------ATSPQVT 960
ATSPQVT
Sbjct: 901 SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960
Query: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200
BLAST of Cp4.1LG04g06870 vs. NCBI nr
Match:
XP_022927757.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 2024 bits (5245), Expect = 0.0
Identity = 1177/1366 (86.16%), Postives = 1182/1366 (86.53%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ LMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
MQGSVA VQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721 MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780
Query: 781 QQ---------------------------------------------------------- 840
QQ
Sbjct: 781 QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900
Query: 901 -----------------------------------------------------ATSPQVT 960
ATSPQVT
Sbjct: 901 SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960
Query: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match:
A0A6J1ELX0 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)
HSP 1 Score: 2029 bits (5257), Expect = 0.0
Identity = 1177/1365 (86.23%), Postives = 1182/1365 (86.59%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ LMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
MQGSVA VQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721 MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780
Query: 781 QQ---------------------------------------------------------- 840
QQ
Sbjct: 781 QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900
Query: 901 -----------------------------------------------------ATSPQVT 960
ATSPQVT
Sbjct: 901 SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960
Query: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match:
A0A6J1EI34 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)
HSP 1 Score: 2024 bits (5245), Expect = 0.0
Identity = 1177/1366 (86.16%), Postives = 1182/1366 (86.53%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ LMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNM---QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSL 780
MQGSVA VQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQGNSLSSL
Sbjct: 721 MQGSVALVQQNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQGNSLSSL 780
Query: 781 QQ---------------------------------------------------------- 840
QQ
Sbjct: 781 QQVGAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQL 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 LQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQM 900
Query: 901 -----------------------------------------------------ATSPQVT 960
ATSPQVT
Sbjct: 901 SHLNQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVT 960
Query: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN
Sbjct: 961 QNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPN 1020
Query: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE
Sbjct: 1021 AGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLE 1080
Query: 1081 RLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
RLIKAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1081 RLIKAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1140
Query: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIE 1191
FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIE
Sbjct: 1141 FVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIE 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match:
A0A6J1JM75 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)
HSP 1 Score: 2019 bits (5230), Expect = 0.0
Identity = 1173/1371 (85.56%), Postives = 1179/1371 (86.00%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDS+NWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQK+QQGSMPHQLMQSHIPQQQTNLM PNQL SSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ---LMNQQSSLS 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ LMNQQSSLS
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQQLMNQQSSLS 420
Query: 421 NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL
Sbjct: 421 NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
Query: 481 STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAP 540
STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ PQSNTLSHELQQRLQAGGQAP
Sbjct: 481 STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ----PQSNTLSHELQQRLQAGGQAP 540
Query: 541 GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY
Sbjct: 541 GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
Query: 601 LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD
Sbjct: 601 LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
Query: 661 KIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
KIGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH
Sbjct: 661 KIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
Query: 721 SANMQGSVAPVQQNNMNNMNNM------QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQG 780
SANMQGSVAPVQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQG
Sbjct: 721 SANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQG 780
Query: 781 NSLSSLQQ---------------------------------------------------- 840
NSLSSLQQ
Sbjct: 781 NSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTNILQHQHMKQ 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQ 900
Query: 901 -----------------------------------------------------------A 960
A
Sbjct: 901 MQAHQMSHLNQIEINDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQA 960
Query: 961 TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA
Sbjct: 961 TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
Query: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSV 1080
VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSS
Sbjct: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSD 1080
Query: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC
Sbjct: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
Query: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1191
RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV
Sbjct: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match:
A0A6J1JMY4 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485927 PE=4 SV=1)
HSP 1 Score: 2014 bits (5218), Expect = 0.0
Identity = 1173/1372 (85.50%), Postives = 1179/1372 (85.93%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDS+NWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSNNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIY AATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYAAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQK+QQGSMPHQLMQSHIPQQQTNLM PNQL SSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKFQQGSMPHQLMQSHIPQQQTNLMPPNQLQSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ---LMNQQSSLS 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQ LMNQQSSLS
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQQQQLMNQQSSLS 420
Query: 421 NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL
Sbjct: 421 NLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLL 480
Query: 481 STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAP 540
STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ PQSNTLSHELQQRLQAGGQAP
Sbjct: 481 STQGQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQ----PQSNTLSHELQQRLQAGGQAP 540
Query: 541 GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY
Sbjct: 541 GPLLQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELY 600
Query: 601 LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD
Sbjct: 601 LFELKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKD 660
Query: 661 KIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
KIGHYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH
Sbjct: 661 KIGHYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLH 720
Query: 721 SANMQGSVAPVQQNNMNNMNNM------QHNSLPTFSGSAPQQNMTIPMQPSSSLESGQG 780
SANMQGSVAPVQQNNMNNMNNM QHNSLPTFSGSAPQQNMTIPMQP SSLESGQG
Sbjct: 721 SANMQGSVAPVQQNNMNNMNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPGSSLESGQG 780
Query: 781 NSLSSLQQ---------------------------------------------------- 840
NSLSSLQQ
Sbjct: 781 NSLSSLQQVGAVSLQQNPANSSQRVNNSSLASQNGVNVLQPNISSLQSNTNILQHQHMKQ 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QDPQQLLQSQQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQ 900
Query: 901 -----------------------------------------------------------A 960
A
Sbjct: 901 MQAHQMSHLNQIEINDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQA 960
Query: 961 TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA
Sbjct: 961 TSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSA 1020
Query: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSV 1080
VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSS
Sbjct: 1021 VSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSD 1080
Query: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC
Sbjct: 1081 TEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKC 1140
Query: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1191
RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV
Sbjct: 1141 RLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSV 1200
BLAST of Cp4.1LG04g06870 vs. ExPASy TrEMBL
Match:
A0A6J1EIW4 (mediator of RNA polymerase II transcription subunit 15a-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111434564 PE=4 SV=1)
HSP 1 Score: 1970 bits (5103), Expect = 0.0
Identity = 1152/1363 (84.52%), Postives = 1157/1363 (84.89%), Query Frame = 0
Query: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA
Sbjct: 1 MDSSNWRPAQGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKIA 60
Query: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV
Sbjct: 61 VRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQV 120
Query: 121 LNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIASQSSSSLPSSVPPVAGLASAPMANIGGQ 180
LNQGPSMSGPMSSNQPQPRQQLLSQ+IQNNIASQSSSSLPSSVPPVAGLASAPMANI GQ
Sbjct: 121 LNQGPSMSGPMSSNQPQPRQQLLSQNIQNNIASQSSSSLPSSVPPVAGLASAPMANIVGQ 180
Query: 181 NPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
NPSMQNVSGVPQSSVGNAMGQGVS+NVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF
Sbjct: 181 NPSMQNVSGVPQSSVGNAMGQGVSSNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQLFF 240
Query: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ
Sbjct: 241 QQQHLQQQIMKQKYQQGSMPHQLMQSHIPQQQTNLMAPNQLPSSQQSVMQPSLSNLQQNQ 300
Query: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
QSSIQQPTQSMLQQPPQPVLRQQQQSQQHS+LHQQPTMSQQASLSSQQQQQLINQQSNSS
Sbjct: 301 QSSIQQPTQSMLQQPPQPVLRQQQQSQQHSVLHQQPTMSQQASLSSQQQQQLINQQSNSS 360
Query: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQQQLMNQQSSLSNLQ 420
NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ LMNQQSSLSNLQ
Sbjct: 361 NMQQNSLIQNSVGDMQQQLPQQSRSHGQQSNLSNMQTPPSQQQQQQ--LMNQQSSLSNLQ 420
Query: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ
Sbjct: 421 QPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQ 480
Query: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL
Sbjct: 481 GQQGQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPL 540
Query: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE
Sbjct: 541 LQSQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFE 600
Query: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIG 660
LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKI
Sbjct: 601 LKEMYQKILPKVHQFDSLPQQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIS 660
Query: 661 HYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
HYEKQIVSFLNSNRPRN VSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN
Sbjct: 661 HYEKQIVSFLNSNRPRNPVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSAN 720
Query: 721 MQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSSLQQ- 780
MQGS APQQNMTIPMQP SSLESGQGNSLSSLQQ
Sbjct: 721 MQGS--------------------------APQQNMTIPMQPGSSLESGQGNSLSSLQQV 780
Query: 781 ------------------------------------------------------------ 840
Sbjct: 781 GAVSLQQNPANGSQRANNSSLASQNGVNALQPNISSLQSNTNILQHQHMKQQDPQQLLQS 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 QQQLKQQMQQRHMQHLKQQMLQHQQQQQQQPQLHQQQSQLQQQGKQQLPTQMQAHQMSHL 900
Query: 901 --------------------------------------------------ATSPQVTQNS 960
ATSPQVTQNS
Sbjct: 901 NQIEMNDLKMRQGVAAKPGMFQHPGTQRSAYTHPQMKPGTSFPISPPIFQATSPQVTQNS 960
Query: 961 SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN 1020
SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN
Sbjct: 961 SPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGN 1020
Query: 1021 TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI 1080
TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI
Sbjct: 1021 TGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLI 1080
Query: 1081 KAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS 1140
KAVKSMSP+ALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS
Sbjct: 1081 KAVKSMSPRALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVS 1140
Query: 1141 HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPRIEANH 1191
HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKR RIEA+H
Sbjct: 1141 HDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRSRIEASH 1200
BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match:
AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )
HSP 1 Score: 942.6 bits (2435), Expect = 3.1e-274
Identity = 688/1375 (50.04%), Postives = 855/1375 (62.18%), Query Frame = 0
Query: 1 MDSSNWRPA-QGGESGVDAGDWRSQLQPDSRHRIVNKIMETLKRHLPVSGHEGLSELRKI 60
MD++NWRP+ GE +D GDWR+QL PDSR +IVNKIMETLK+HLP SG EG++ELR+I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 61 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQTTALPSNSMVPTNKPLDSTSQSMQSQ 120
A RFEEKI++ A +Q+DYLRKIS+KMLTMETKSQ A S ++ P + S+ S
Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAI-----PAANNGTSIDSI 120
Query: 121 VLNQGPSMSGPMSSNQPQPRQQLLSQSIQNNIAS--QSSSSLPSSVPPVAGLASAPMANI 180
NQG + G +S+NQ Q Q LLSQ++QNN AS S++LPSS+PPV+ + + ++
Sbjct: 121 PTNQGQLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNNTTSV 180
Query: 181 GGQNPSMQNVSGVPQSSVGNAMGQGVSTNVFTNSQRPIQGRQVVSQQQQQQQQSQSQQQQ 240
QN +MQNV+G+ Q S G G+S+N+F+ QR + GR S QQQQ
Sbjct: 181 VNQNANMQNVAGMLQDSSGQ---HGLSSNMFSGPQRQMLGR--------PHAMSSQQQQQ 240
Query: 241 LFFQQQHLQQQIMKQKYQQGSM--PHQLMQSHIPQQQTNLMAPNQLPSSQQ-----SVMQ 300
+ QQ LQQQ++KQ +Q G++ P+ L+ SHI QQQ N++ PNQL SSQQ S Q
Sbjct: 241 PYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTSATQ 300
Query: 301 PS------LSNLQQNQQS----SIQQPTQSMLQQPPQPVLRQQQQSQQHSLLHQQPTMSQ 360
PS L L NQQS S QQ TQSML+Q +LRQ QSQQ S +HQQ +
Sbjct: 301 PSTVNSAPLQGLHTNQQSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLP 360
Query: 361 QASLSSQQQQ--QLINQQ-SNSSNMQQNSLI-QNSVGDMQQQLPQQSRSHGQQSNLSN-- 420
Q S+S QQQ QL+ QQ +NSS +QQ ++ Q+ VGDMQQQ Q R QQ+N+ N
Sbjct: 361 QQSISPLQQQPTQLMRQQAANSSGIQQKQMMGQHVVGDMQQQ--HQQRLLNQQNNVMNIQ 420
Query: 421 --------MQTPPSQQQQQ---QQQLMNQQSSLSNLQQPQLGPQSNVSGLQ--QQQMHGT 480
+Q P QQ+QQ QQQLM+QQ+SL Q LG QSNV+GLQ QQQM +
Sbjct: 421 QQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQQMLNS 480
Query: 481 QSGNSNMQSNQHGVHMMQQNKVQMQQQPPQNPSNLLSTQGQQGQLQSSQQLMSQIPLQSA 540
Q GNS++Q+NQH VHM+ Q V + Q+ Q L S+QGQQ Q Q SQQ Q+ Q
Sbjct: 481 QVGNSSLQNNQHSVHMLSQPTVGL-QRTHQAGHGLYSSQGQQSQNQPSQQ---QMMPQLQ 540
Query: 541 QVQQQVSLQQQQQQQPQSNTLSHELQQRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP 600
QQ+ LQQ Q N L ++QQRLQA GQ G LL QNV+DQQ+QLY QR LP
Sbjct: 541 SHHQQLGLQQ------QPNLLQQDVQQRLQASGQVTGSLLPPQNVVDQQRQLYQSQRTLP 600
Query: 601 ETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQ 660
E S+SLDSTAQT ANGGDWQEE+YQKIKSMKE YL +L E+YQ++ K+ Q DS+PQQ
Sbjct: 601 EMPSSSLDSTAQTESANGGDWQEEVYQKIKSMKETYLPDLNEIYQRVAAKLQQ-DSMPQQ 660
Query: 661 PKSEQLNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVST 720
+S+QL KLR F+ +LER+I FL V K+NI+ KDK+ +YEKQI+ FLN +RPR V
Sbjct: 661 QRSDQLEKLRQFKTMLERMIQFLSVSKSNIMPALKDKVAYYEKQIIGFLNMHRPRKPV-- 720
Query: 721 LQQGQLPASHMQSMQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMNNMNNMQH 780
QQGQLP S MQ MQQ QSQ QS +NQ NPQ+ S +MQG+ QQ++M NM +
Sbjct: 721 -QQGQLPQSQMQPMQQPQSQTVQDQSHDNQTNPQMQSMSMQGAGPRAQQSSMTNMQSNVL 780
Query: 781 NSLPTFSGSAPQQNMTIPMQPSSSLESGQGNSLSS------------------------- 840
+S P SAPQQN+ + P+SSLESGQGN+L++
Sbjct: 781 SSRP--GVSAPQQNIPSSI-PASSLESGQGNTLNNGQQVAMGSMQQNTSQLVNNSSASAQ 840
Query: 841 ------------------------------------------------------------ 900
Sbjct: 841 SGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQMQQQQLQARQQQQQQQL 900
Query: 901 ---------------------------------------------------------LQQ 960
L Q
Sbjct: 901 QARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHSMQGQRANYPLQQLKPGAVSSPQLLQ 960
Query: 961 ATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSP-STPLAPSPMPGDSEKPT 1020
SPQ++Q+ SPQVDQ+N ++N++GTPLQ A+SPFVVPSP STPLAPSPM DSEKP
Sbjct: 961 GASPQMSQHLSPQVDQKN---TVNKMGTPLQPANSPFVVPSPSSTPLAPSPMQVDSEKPG 1020
Query: 1021 SAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKS 1080
S+ S+ N QQ SLAIGTPGISASPLL EF+ DG + SGK
Sbjct: 1021 SSSLSMGNIAR--QQATGMQGVVQSLAIGTPGISASPLLQEFTSPDGNILNSSTITSGKP 1080
Query: 1081 SVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMT 1140
S TE P+ERLI+AVKS+SP+AL+++VS IGSVVSM+DRIAGSAPGNGSRA+VGEDLVAMT
Sbjct: 1081 SATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDLVAMT 1140
Query: 1141 KCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATS 1192
KCRLQARNF++ +G TK+M+RHT+AMPL+V S GSV D +K G+ETSDLESTATS
Sbjct: 1141 KCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLESTATS 1200
BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match:
AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )
HSP 1 Score: 291.6 bits (745), Expect = 2.9e-78
Identity = 244/708 (34.46%), Postives = 365/708 (51.55%), Query Frame = 0
Query: 543 SQNVMDQQKQLYHPQRVLPETSSTSLDSTAQTGQANGGDWQEEIYQKIKSMKELYLFELK 602
+++ + QK ++ ++ S DST +T N G+WQEE YQKIK +KE+ L L
Sbjct: 191 TKHSITDQKSVFDTTVLIMNIIVASQDSTGKTVNVNAGNWQEETYQKIKKLKEMCLPVLS 250
Query: 603 EMYQKILPKVHQFDSLPQQPKSEQ-LNKLRAFRVILERLIAFLQVPKNNIVIGFKDKIGH 662
M+Q++ K+ + +SLP QP Q + KL+A ++ +E L+ FL V ++++ +DK
Sbjct: 251 LMHQRVAEKLRETESLPPQPMQAQWIEKLKAGKLSMEHLMFFLNVHRSSVSEKHRDKFSQ 310
Query: 663 YEKQIVSFLNSNRPRNSVSTLQQGQLPASH------------MQSMQQSQSQMTPLQSPE 722
YE I+ F S + QQGQ P S QS+ + Q + + S +
Sbjct: 311 YEYHILKFTKSQTMVLRPTQQQQGQFPPSQTAMQTQSPQVHVSQSLYKEQRRSRLMPSSQ 370
Query: 723 N------QINPQLHSAN------MQGSV--APVQQN------NMNNMNNMQ------HNS 782
N QI P+L + G+V V+QN N++++ ++Q H
Sbjct: 371 NEASSLLQIRPKLDPRDENIIMASSGNVMLPSVKQNPRAVNTNISSVQSLQKQKRFHHRQ 430
Query: 783 L---PTFSGSAPQQNMTIPMQP--------------SSSLESGQGNSLSSLQQATSPQVT 842
+ G+ Q T M + S Q +S Q+
Sbjct: 431 MQQQQPQQGNHQHQMQTNEMNDVRMRERVNIKARLLEQQVSSSQRQVPKQESNVSSSQIQ 490
Query: 843 QNSSPQ-VDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKPTSAVSSLP 902
+SSPQ VDQ + +++N+ GTPL S+ S FV P APSP+PGDSE P S S +
Sbjct: 491 NHSSPQLVDQHILPATINKTGTPLNSSGSAFVAP------APSPVPGDSEMPISVESPVS 550
Query: 903 NAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPTVSGKSSVTEQPL 962
++ S G +PLL V +TE+P+
Sbjct: 551 GVDEINSTLDSSSKL---------GTQETPLL---------------FVPPPEPITERPI 610
Query: 963 ERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGN-GSRAAVGEDLVAMTKCRLQA 1022
+RLIKA ++ SPK+L SVS I SV+SM+D I GS P + GSRA +GEDL T
Sbjct: 611 DRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSERT------ 670
Query: 1023 RNFVSHDGSNGTKRMRRHTSAMPLNVVSSAGSVNDVFKPLTGAETSDLESTATSSVKRPR 1082
RNF +H+ +N +KRM+R + +P ++ S D ++ L+ E S++ ST +S +K
Sbjct: 671 RNFTTHEETNLSKRMKRSINIVPPDMSSQI----DSYEQLSSLE-SEVVSTTSSGLKVNN 730
Query: 1083 IEANHVLLEEIREINQRLIDTVVVISDEVVDPSALAAAGDGSDGTIVKCSFSAVALSPSL 1142
I + LL+EI+E N RL++TVV I DE S GTIV C+++ VALS +
Sbjct: 731 IAPGYALLQEIKETNGRLVETVVEICDE------------DSLGTIVTCTYAPVALSATF 790
Query: 1143 KSQYTSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRN 1192
K Y S +++ IQPLRLL P +YP SPI+L++ + S +YEDLS + +SRFS+S++
Sbjct: 791 KDHYKSGKIAQIQPLRLLFPMDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKE 845
BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match:
AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )
HSP 1 Score: 290.8 bits (743), Expect = 4.9e-78
Identity = 296/868 (34.10%), Postives = 429/868 (49.42%), Query Frame = 0
Query: 401 QQQQQQQQLMNQQSSLSNLQQPQLGPQSNVSGLQQQQMHGTQSGNSNMQSNQHGVHMMQQ 460
Q++Q+Q+QL+NQ L+NL P S + QQ G +S+ Q+N +H M Q
Sbjct: 156 QKRQEQEQLINQ---LTNL------PTSRPNNRDQQ---GAFQVSSSQQNNNVTLHAMSQ 215
Query: 461 NKVQMQQQPPQNPSNLLSTQGQQ-GQLQSSQQLMSQIPLQSAQVQQQVSLQQQQQQQPQS 520
K +Q T+GQQ GQ Q P+ S Q +QQ + QQ PQ+
Sbjct: 216 QKNNLQSM----------TRGQQVGQSQ---------PMMSQQYRQQYPM----QQDPQN 275
Query: 521 NTLSHELQ--QRLQAGGQAPGPLLQSQNVMDQQKQLYHPQRVLP-----ETSSTSLDSTA 580
L L Q QA L Q+QN+ DQQ Q +R P S DST
Sbjct: 276 RNLQKHLDFVQNNTNQFQAASSLRQTQNITDQQNQPQQLERANPSILIMNIIVASQDSTG 335
Query: 581 QTGQANGGDWQEEIYQKIKSMKELYLFELKEMYQKILPKVHQFDSLPQQPKSEQ-LNKLR 640
+T N G+WQEE YQKIK +KE+ L L M+Q++ K+ + +SLP QP Q + KL+
Sbjct: 336 KTVNVNAGNWQEETYQKIKKLKEMCLPVLSLMHQRVAEKLRETESLPPQPMQAQWIEKLK 395
Query: 641 AFRVILERLIAFLQVPKNNIVIGFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASH 700
A ++ +E L+ FL V ++++ +DK YE I+ F S + QQGQ P S
Sbjct: 396 AGKLSMEHLMFFLNVHRSSVSEKHRDKFSQYEYHILKFTKSQTMVLRPTQQQQGQFPPSQ 455
Query: 701 ------------MQSMQQSQSQMTPLQSPEN------QINPQLHSAN------MQGSV-- 760
QS+ + Q + + S +N QI P+L + G+V
Sbjct: 456 TAMQTQSPQVHVSQSLYKEQRRSRLMPSSQNEASSLLQIRPKLDPRDENIIMASSGNVML 515
Query: 761 APVQQN------NMNNMNNMQ------HNSL---PTFSGSAPQQNMTIPMQP-------- 820
V+QN N++++ ++Q H + G+ Q T M
Sbjct: 516 PSVKQNPRAVNTNISSVQSLQKQKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVN 575
Query: 821 ------SSSLESGQGNSLSSLQQATSPQVTQNSSPQ-VDQQNMFSSMNRIGTPLQSASSP 880
+ S Q +S Q+ +SSPQ VDQ + +++N+ GTPL S+ S
Sbjct: 576 IKARLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHILPATINKTGTPLNSSGSA 635
Query: 881 FVVPSPSTPLAPSPMPGDSEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASP 940
FV P APSP+PGDSE P S S + ++ S G +P
Sbjct: 636 FVAP------APSPVPGDSEMPISVESPVSGVDEINSTLDSSSKL---------GTQETP 695
Query: 941 LLAEFSGTDGAYAIALPTVSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMID 1000
LL V +TE+P++RLIKA ++ SPK+L SVS I SV+SM+D
Sbjct: 696 LL---------------FVPPPEPITERPIDRLIKAFQAASPKSLAESVSEISSVISMVD 755
Query: 1001 RIAGSAPGN-GSRAAVGEDLVAMTKCRLQARNFVSHDGSNGTKRMRRHTSAMPLNVVSSA 1060
I GS P + GSRA +GEDL T RNF +H+ +N +KRM+R + +P ++ S
Sbjct: 756 MIGGSFPSSGGSRAGLGEDLSERT------RNFTTHEETNLSKRMKRSINIVPPDMSSQI 815
Query: 1061 GSVNDVFKPLTGAETSDLESTATSSVKRPRIEANHVLLEEIREINQRLIDTVVVISDEVV 1120
D ++ L+ E S++ ST +S +K I + LL+EI+E N RL++TVV I DE
Sbjct: 816 ----DSYEQLSSLE-SEVVSTTSSGLKVNNIAPGYALLQEIKETNGRLVETVVEICDE-- 875
Query: 1121 DPSALAAAGDGSDGTIVKCSFSAVALSPSLKSQYTSAQM----------SPIQPLRLLVP 1180
S GTIV C+++ VALS + K Y S ++ + IQPLRLL P
Sbjct: 876 ----------DSLGTIVTCTYAPVALSATFKDHYKSGKIIFYVSKCLMQAQIQPLRLLFP 935
Query: 1181 TNYPNCSPILLDKFPVEVS-KEYEDLSIKAKSRFSISLRNLSQPMSLGDIARTWDVCARA 1192
+YP SPI+L++ + S +YEDLS + +SRFS+S++ S+P IA+TW+ CARA
Sbjct: 936 MDYPYSSPIVLEEISFDTSVHKYEDLSARTRSRFSLSMKEFSEPGFSKGIAQTWNDCARA 935
BLAST of Cp4.1LG04g06870 vs. TAIR 10
Match:
AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 144.4 bits (363), Expect = 5.7e-34
Identity = 121/381 (31.76%), Postives = 169/381 (44.36%), Query Frame = 0
Query: 595 ELYLFELKEMYQKILPKVHQFDSLP-QQPKSEQLNKLRAFRVILERLIAFLQVPKNNIVI 654
+++ +L E+YQ++ K+ Q DSL Q+ +S+Q KL+ + +LE ++ FL + K+NI
Sbjct: 10 QIHQRDLNEIYQRVAAKLQQEDSLSHQKQRSDQFEKLKRGKTVLEGMLRFLSLSKSNIKP 69
Query: 655 GFKDKIGHYEKQIVSFLNSNRPRNSVSTLQQGQLPASHMQSMQQSQSQMTPLQSPENQIN 714
KD + + + I++FLN R T+Q+ QL S +Q MQQ SQ QS ++Q
Sbjct: 70 DLKDSMDYRKNNIMNFLNMQSLR---KTVQKLQLTKSEIQPMQQPLSQTVQDQSHDDQTT 129
Query: 715 PQLHSANMQGSVAPVQQNNMNNMNNMQHNSLPTFSGSAPQQNMTIPMQPSSSLESGQGNS 774
Q+ S +MQG+ + VQQ
Sbjct: 130 LQMQSMSMQGAGSRVQQ------------------------------------------- 189
Query: 775 LSSLQQATSPQVTQNSSPQVDQQNMFSSMNRIGTPLQSASSPFVVPSPSTPLAPSPMPGD 834
Sbjct: 190 ------------------------------------------------------------ 249
Query: 835 SEKPTSAVSSLPNAGNTGQQMNVSGAQAPSLAIGTPGISASPLLAEFSGTDGAYAIALPT 894
+ SL IGTPGISASPLL E + DG L +
Sbjct: 250 ----------------------IRQGVLQSLEIGTPGISASPLLPELTSPDGNIINPLTS 262
Query: 895 VSGKSSVTEQPLERLIKAVKSMSPKALNASVSGIGSVVSMIDRIAGSAPGNGSRAAVGED 954
GKSS TE P+ERLI+A+KS+SP+AL+++V I SVVSM+DRIAGS PG GSRA+ G D
Sbjct: 310 TCGKSSATELPIERLIRAMKSISPQALSSAVCDIRSVVSMVDRIAGSVPGKGSRASFGVD 262
Query: 955 LVAMTKCRLQARNFVSHDGSN 975
LVAMTKC LQ RNF++ DG +
Sbjct: 370 LVAMTKCHLQERNFMTQDGDH 262
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4I171 | 4.4e-273 | 50.04 | Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ... | [more] |
Q9SHV7 | 7.0e-77 | 34.10 | Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ... | [more] |
F4I169 | 8.0e-33 | 31.76 | Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023529243.1 | 0.0 | 86.56 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbi... | [more] |
XP_023529242.1 | 0.0 | 86.49 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... | [more] |
KAG7022562.1 | 0.0 | 86.17 | Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argy... | [more] |
XP_022927758.1 | 0.0 | 86.23 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbi... | [more] |
XP_022927757.1 | 0.0 | 86.16 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbi... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ELX0 | 0.0 | 86.23 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... | [more] |
A0A6J1EI34 | 0.0 | 86.16 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... | [more] |
A0A6J1JM75 | 0.0 | 85.56 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucur... | [more] |
A0A6J1JMY4 | 0.0 | 85.50 | mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucur... | [more] |
A0A6J1EIW4 | 0.0 | 84.52 | mediator of RNA polymerase II transcription subunit 15a-like isoform X3 OS=Cucur... | [more] |
Match Name | E-value | Identity | Description | |
AT1G15780.1 | 3.1e-274 | 50.04 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT2G10440.2 | 2.9e-78 | 34.46 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G10440.1 | 4.9e-78 | 34.10 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G15770.1 | 5.7e-34 | 31.76 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |