Cp4.1LG04g06830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g06830
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG04: 4593264 .. 4594914 (-)
RNA-Seq Expression	Cp4.1LG04g06830
Synteny	Cp4.1LG04g06830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATTACATGTGTTTTAGTGATCAAATTGATTGCTTAACTTCACTCTCACGTCACCCTCTTCTTTATAAATATCATCATTCTTCTCTTCCATTCTTCACCTCCCATGGATGCTGCTCATACCAACAACTTCATCCTCCCTCCCGGGTTCCGGTTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTCCCCGGTATGTTTAACTATATAAGACTCTTTTTTATCTCTTAACCTAATCTTTTCACTCCGACTAAAAAAATTTAAAAATATCCGTAAACTTTCAAAACAAAAAAAAAAAAAATAATAAATAATTTTATCGACCAAAATAGATAGAAATAAAATGACGAACACTATGAAATAAAATAAAAGAGCTACTATATATTTTTTTTAATTTAGAAATATATATTTTTAGTAATTTTTAATATATTGGTATTATTTATATATTAGGATCGAATATATTTTTTCTTTTGAACCCTTCCTTTATCTAATTTATCCGAATGAAAATATTTATAGAAACTTTGAAAAACAATATTAATATCTTAAAATTTTTATATTTAGTGGTATTTTTAAAATTTTTAATATTTTAAAAAATTAATTTAAGGGTATTTTTAAAATAAAATATTTTTTTTTTGCATTTTTCAAAAAAAAATTAAATGGAAGGATATTGAGGAAAACTTTAAAATTAAAAAATAATTTAAAACAAAATTAATGAAATATAAAGTTTCCATTAATTTAAGCTATAAATATATTTTTATATTCCACGTGGAAGTTGTTGATTGGTTGTGTGTTTAGGGAAGGCGTTGGGAGAGGGCAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCCCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCTCCGCCGCCGCCGCCGGTAGATCGTCTAGACGCCGAGGACGTCCAAAACGAGTACGCCACCGTCCACTGAAACCACTTTTCAAAAACCACTTTTCGCAAAACCGCTTAAAATAAAATCTATTTATAAAATCAAATAAATAAATTGATACAGTCAATTTTTAATAAAAAAAAGAAAATATAATATATATGGTAAACTATAATTTATAAATAAATATTATTAACAGATTTGATGGTTTTTTTTTCTTCAGGATTATAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGAAGATAAGGATAGGATTCAGCTGTTACCGAACAATCCCTTACCACGTGGCACTAAATTACCAATCCAACCTACCTCGTTTTTATATTTTCCACTTTTTTTTTTTAATTATTCTTTTCTTTTCTTTATGTTTATTTTTATTAATTAGTTCTACAAAAAAAAAAAAAAAAATAATAA

mRNA sequence

TTCATTACATGTGTTTTAGTGATCAAATTGATTGCTTAACTTCACTCTCACGTCACCCTCTTCTTTATAAATATCATCATTCTTCTCTTCCATTCTTCACCTCCCATGGATGCTGCTCATACCAACAACTTCATCCTCCCTCCCGGGTTCCGGTTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTCCCCGGGAAGGCGTTGGGAGAGGGCAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCCCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCTCCGCCGCCGCCGCCGGTAGATCGTCTAGACGCCGAGGACGTCCAAAACGAGATTATAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGAAGATAAGGATAGGATTCAGCTGTTACCGAACAATCCCTTACCACGTGGCACTAAATTACCAATCCAACCTACCTCGTTTTTATATTTTCCACTTTTTTTTTTTAATTATTCTTTTCTTTTCTTTATGTTTATTTTTATTAATTAGTTCTACAAAAAAAAAAAAAAAAATAATAA

Coding sequence (CDS)

ATGGATGCTGCTCATACCAACAACTTCATCCTCCCTCCCGGGTTCCGGTTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTCCCCGGGAAGGCGTTGGGAGAGGGCAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCCCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCTCCGCCGCCGCCGCCGGTAGATCGTCTAGACGCCGAGGACGTCCAAAACGAGATTATAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGA

Protein sequence

MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDDLDEISLPDRLH

Homology

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BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.7e-71
Identity = 125/187 (66.84%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVHFLHRKA+LLPCHPDVIPDL L+ YDPW+LPGKALGEG QWYFY
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYFY 62

Query: 71  SRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAA 130
           SRKT  RVT+NGYW  +G DEP+  S+T + VG+KKY  F++GD++TNW+M EY L +++
Sbjct: 63  SRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDSQTNWIMQEYSLPDSS 122

Query: 131 SAAAAGRSSRRRGRP-----KRDYSKWVLCRVY-----EEEEEEGAELSCLDEVFLTLDD 188
           S+++  RSS+R  R      K DYSKWV+CRVY     EEE+++G ELSCLDEVFL+LDD
Sbjct: 123 SSSS--RSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCLDEVFLSLDD 182

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34
Identity = 80/189 (42.33%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA +P    +I ++ L+ +DPWELP KA     +WYF+
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFF 88

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVAS-ATAEVVGMKKYFLFHVG----DAKT 130
           S +           R   +GYW   G D+P++AS +T E VG+KK  +F+ G      KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 131 NWVMHEYRLYNAASAAAAGRSSRR---------RGRPKRDYSKWVLCRVYEEEEEEGA-- 175
           NW+MHEYRL + +S+AAA  ++R+         RG        WVLCR+Y++  + GA  
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKAGAGQ 208

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.4e-34
Identity = 80/189 (42.33%), Postives = 113/189 (59.79%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA +P    +I ++ L+ +DPW+LP KA     +WYF+
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFF 88

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVAS-ATAEVVGMKKYFLFHVG----DAKT 130
           S +           R   +GYW   G D+P+++S +T E VG+KK  +F+ G      KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 131 NWVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSK---------WVLCRVYEEEEEEGA-- 175
           NW+MHEYRL + +S+AAA  ++RR   P    SK         WVLCR+Y++  + GA  
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGAGQ 208

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32
Identity = 76/185 (41.08%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA +P    +I ++ L+ +DPWELP KA     +WYF+
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFF 87

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATA-EVVGMKKYFLFHVG----DAKT 130
           S +           R   +GYW   G D+P++AS    E VG+KK  +F+ G      KT
Sbjct: 88  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKT 147

Query: 131 NWVMHEYRLYNAASAAAAGRSSRRRGRPKR---DYSKWVLCRVYEEEEEEGA-----ELS 175
           NW+MHEYRL +A+S+A   R     G  +        WVLCR+Y++  +  A      + 
Sbjct: 148 NWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKINKAAAGDQQRSME 207

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot
Match: A0SPJ8 (NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NAM-1 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.3e-32
Identity = 76/180 (42.22%), Postives = 105/180 (58.33%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA  P    +I ++ L+ +DPWELP KA    ++WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATA---EVVGMKKYFLFHVG----DA 130
           S +           R   +GYW   G D+P++ASAT    E VG+KK  +F+ G      
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 131 KTNWVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSK---------WVLCRVYEEEEEEGA 167
           KTNW+MHEYRL    + A+AG ++  R  P    S+         WVLCR+Y++  +  A
Sbjct: 155 KTNWIMHEYRL----TGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAA 210

[Close]

BLAST of Cp4.1LG04g06830 vs. NCBI nr
Match: XP_023531750.1 (NAC domain-containing protein 104-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1036), Expect = 3.90e-142
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA
Sbjct: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120

Query: 121 MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD 180
           MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD
Sbjct: 121 MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD 180

Query: 181 LDEISLPDRLH 191
           LDEISLPDRLH
Sbjct: 181 LDEISLPDRLH 191

[Close]

BLAST of Cp4.1LG04g06830 vs. NCBI nr
Match: XP_022927773.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita moschata] >KAG7022558.1 NAC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382 bits (981), Expect = 8.57e-134
Identity = 185/191 (96.86%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHT+NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120

Query: 121 MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD 180
           MHEYRLYNAA  AAAGRSSRRRGRPKRDYSKWVLCRVYEEEEE GAELSCLDEVFLTLDD
Sbjct: 121 MHEYRLYNAA--AAAGRSSRRRGRPKRDYSKWVLCRVYEEEEE-GAELSCLDEVFLTLDD 180

Query: 181 LDEISLPDRLH 191
           LDEISLPDRLH
Sbjct: 181 LDEISLPDRLH 188

[Close]

BLAST of Cp4.1LG04g06830 vs. NCBI nr
Match: KAG6588788.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (978), Expect = 2.46e-133
Identity = 184/191 (96.34%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHT+NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120

Query: 121 MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD 180
           MHEYRLYNAA  AAAGR+SRRRGRPKRDYSKWVLCRVYEEEEE GAELSCLDEVFLTLDD
Sbjct: 121 MHEYRLYNAA--AAAGRASRRRGRPKRDYSKWVLCRVYEEEEE-GAELSCLDEVFLTLDD 180

Query: 181 LDEISLPDRLH 191
           LDEISLPDRLH
Sbjct: 181 LDEISLPDRLH 188

[Close]

BLAST of Cp4.1LG04g06830 vs. NCBI nr
Match: XP_022988957.1 (NAC domain-containing protein 104-like [Cucurbita maxima])

HSP 1 Score: 379 bits (974), Expect = 1.24e-132
Identity = 183/194 (94.33%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHT+NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELEGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG  KTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGHVKTNWV 120

Query: 121 MHEYRLYNAASAA---AAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLT 180
           MHEYRLYNAASAA   AA RSSRRRGRPK DYSKWVLCRVYEEEEE GAELSCLDEVFLT
Sbjct: 121 MHEYRLYNAASAASAAAASRSSRRRGRPKLDYSKWVLCRVYEEEEETGAELSCLDEVFLT 180

Query: 181 LDDLDEISLPDRLH 191
           LDDLDEISLPDRLH
Sbjct: 181 LDDLDEISLPDRLH 194

[Close]

BLAST of Cp4.1LG04g06830 vs. NCBI nr
Match: XP_011658766.1 (NAC domain-containing protein 104 [Cucumis sativus] >KGN43677.1 hypothetical protein Csa_017076 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 2.96e-110
Identity = 157/202 (77.72%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           M A H++NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDL LF YDPWEL GKA
Sbjct: 1   MAAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----- 120
           LGEGN+WYFYSRK + RVT NG+WNPLGRD+PV+++AT+EVVGMKKYFLFH+ DA     
Sbjct: 61  LGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPL 120

Query: 121 KTNWVMHEYRLYNAASAAA-AGRSSRRRGRPKRDYSKWVLCRVYE-----EEEEEGAELS 180
           KTNW+MHE+RL +AA+A A +  SSRRRGRPKRDYSKWVLCRVYE     EEEE+GAELS
Sbjct: 121 KTNWIMHEFRLADAAAAVATSSSSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAELS 180

Query: 181 CLDEVFLTLDDLDEISLPDRLH 191
           CLDEVFLTLDDLDEISLP+R+ 
Sbjct: 181 CLDEVFLTLDDLDEISLPNRIQ 202

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL
Match: A0A6J1ELY5 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434573 PE=4 SV=1)

HSP 1 Score: 382 bits (981), Expect = 4.15e-134
Identity = 185/191 (96.86%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHT+NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120

Query: 121 MHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLTLDD 180
           MHEYRLYNAA  AAAGRSSRRRGRPKRDYSKWVLCRVYEEEEE GAELSCLDEVFLTLDD
Sbjct: 121 MHEYRLYNAA--AAAGRSSRRRGRPKRDYSKWVLCRVYEEEEE-GAELSCLDEVFLTLDD 180

Query: 181 LDEISLPDRLH 191
           LDEISLPDRLH
Sbjct: 181 LDEISLPDRLH 188

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL
Match: A0A6J1JEG2 (NAC domain-containing protein 104-like OS=Cucurbita maxima OX=3661 GN=LOC111486162 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 6.00e-133
Identity = 183/194 (94.33%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           MDAAHT+NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELEGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG  KTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGHVKTNWV 120

Query: 121 MHEYRLYNAASAA---AAGRSSRRRGRPKRDYSKWVLCRVYEEEEEEGAELSCLDEVFLT 180
           MHEYRLYNAASAA   AA RSSRRRGRPK DYSKWVLCRVYEEEEE GAELSCLDEVFLT
Sbjct: 121 MHEYRLYNAASAASAAAASRSSRRRGRPKLDYSKWVLCRVYEEEEETGAELSCLDEVFLT 180

Query: 181 LDDLDEISLPDRLH 191
           LDDLDEISLPDRLH
Sbjct: 181 LDDLDEISLPDRLH 194

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL
Match: A0A0A0K5V4 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.43e-110
Identity = 157/202 (77.72%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           M A H++NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDL LF YDPWEL GKA
Sbjct: 1   MAAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----- 120
           LGEGN+WYFYSRK + RVT NG+WNPLGRD+PV+++AT+EVVGMKKYFLFH+ DA     
Sbjct: 61  LGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPL 120

Query: 121 KTNWVMHEYRLYNAASAAA-AGRSSRRRGRPKRDYSKWVLCRVYE-----EEEEEGAELS 180
           KTNW+MHE+RL +AA+A A +  SSRRRGRPKRDYSKWVLCRVYE     EEEE+GAELS
Sbjct: 121 KTNWIMHEFRLADAAAAVATSSSSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAELS 180

Query: 181 CLDEVFLTLDDLDEISLPDRLH 191
           CLDEVFLTLDDLDEISLP+R+ 
Sbjct: 181 CLDEVFLTLDDLDEISLPNRIQ 202

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL
Match: A0A1S3C0L6 (NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.61e-109
Identity = 155/202 (76.73%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 1   MDAAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKA 60
           M A  ++NF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDL+LF YDPWEL GKA
Sbjct: 1   MAAPDSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLSLFTYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----- 120
           LGEGN+WYFYSRK + RVT NG+WNPLGRD+PV+++AT+EVVGMKKYFLFH+ DA     
Sbjct: 61  LGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPL 120

Query: 121 KTNWVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYE------EEEEEGAELS 180
           KTNW+MHE+RL +AA+A+++  SSRRRGRPKRDYSKWVLCRVYE      EEEE+GAELS
Sbjct: 121 KTNWIMHEFRLADAAAASSSS-SSRRRGRPKRDYSKWVLCRVYERDEDQKEEEEDGAELS 180

Query: 181 CLDEVFLTLDDLDEISLPDRLH 191
           CLDEVFLTLDDLDEISLP+R+ 
Sbjct: 181 CLDEVFLTLDDLDEISLPNRIQ 201

[Close]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL
Match: A0A6J1HIE6 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 8.09e-109
Identity = 155/204 (75.98%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 3   AAHTNNFILPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALG 62
           A H++NF LPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL LFPYDPWEL GKALG
Sbjct: 4   ADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALG 63

Query: 63  EGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA---KTNW 122
           EGN+WYFYSRK DARVT NGYWNPLGRD+PV+++AT++VVGMKKYFLFH   A   KTNW
Sbjct: 64  EGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAAADPIKTNW 123

Query: 123 VMHEYRLYNAASAAAAG-------RSSRRRGRPKRDYSKWVLCRVYE-----EEEEEGAE 182
           +MHEYRL +A S++++        RSSRRRGRPKRDYSKWVLCRVYE     EEEE+GAE
Sbjct: 124 IMHEYRLPDAVSSSSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAE 183

Query: 183 LSCLDEVFLTLDDLDEISLPDRLH 191
           LSCLDEVFL+L+DLDEISLP R+ 
Sbjct: 184 LSCLDEVFLSLEDLDEISLPTRIQ 207

[Close]

BLAST of Cp4.1LG04g06830 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 )

HSP 1 Score: 268.1 bits (684), Expect = 5.5e-72
Identity = 125/187 (66.84%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVHFLHRKA+LLPCHPDVIPDL L+ YDPW+LPGKALGEG QWYFY
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYFY 62

Query: 71  SRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAA 130
           SRKT  RVT+NGYW  +G DEP+  S+T + VG+KKY  F++GD++TNW+M EY L +++
Sbjct: 63  SRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDSQTNWIMQEYSLPDSS 122

Query: 131 SAAAAGRSSRRRGRP-----KRDYSKWVLCRVY-----EEEEEEGAELSCLDEVFLTLDD 188
           S+++  RSS+R  R      K DYSKWV+CRVY     EEE+++G ELSCLDEVFL+LDD
Sbjct: 123 SSSS--RSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCLDEVFLSLDD 182

[Close]

BLAST of Cp4.1LG04g06830 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 )

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-30
Identity = 71/163 (43.56%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRFYPTDEEL+V +L RKAA       +I ++ L+ +DPW LP KAL    +WYF+
Sbjct: 14  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 73

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----KTN 130
           S +           RV  +GYW   G D+  + S   + VG+KK  +F++G A    KTN
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDK--IISTEGQRVGIKKALVFYIGKAPKGTKTN 133

Query: 131 WVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEE 162
           W+MHEYRL            SRR G  K D   WVLCR+Y+++
Sbjct: 134 WIMHEYRLI---------EPSRRNGSTKLD--DWVLCRIYKKQ 163

[Close]

BLAST of Cp4.1LG04g06830 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-30
Identity = 69/163 (42.33%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L RKAA  P    +I ++ L+ +DPWELP KA     +WYF+
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG----DAKTN 130
           S +           R   +GYW   G D+PV+AS   + VG+KK  +F+ G      K++
Sbjct: 77  SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSD 136

Query: 131 WVMHEYRLY-NAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEE 161
           W+MHEYRL  N  +    G     +    R    WVLCR+Y++
Sbjct: 137 WIMHEYRLIENKPNNRPPGCDFGNKKNSLR-LDDWVLCRIYKK 178

[Close]

BLAST of Cp4.1LG04g06830 vs. TAIR 10
Match: AT1G01720.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 70/163 (42.94%), Postives = 93/163 (57.06%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRF+PTDEELV+H+L RK A       +I ++ L+ YDPWELPG AL    +WYF+
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFF 66

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----KTN 130
           S +           R   +GYW   G D+P+      + VG+KK  +F+ G A    KTN
Sbjct: 67  SPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKGEKTN 126

Query: 131 WVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEE 162
           W+MHEYRL      A   RS R++    R    WVLCR+Y ++
Sbjct: 127 WIMHEYRL------ADVDRSVRKKKNSLR-LDDWVLCRIYNKK 159

[Close]

BLAST of Cp4.1LG04g06830 vs. TAIR 10
Match: AT3G15500.1 (NAC domain containing protein 3 )

HSP 1 Score: 127.9 bits (320), Expect = 8.9e-30
Identity = 72/163 (44.17%), Postives = 93/163 (57.06%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELPGKALGEGNQWYFY 70
           LPPGFRFYPTDEEL+V +L RKAA       +I ++ L+ +DPW LP KAL    +WYF+
Sbjct: 14  LPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFF 73

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----KTN 130
           S +           RV  +GYW   G D+  V S     VG+KK  +F++G A    KTN
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDK--VISTEGRRVGIKKALVFYIGKAPKGTKTN 133

Query: 131 WVMHEYRLYNAASAAAAGRSSRRRGRPKRDYSKWVLCRVYEEE 162
           W+MHEYRL            SRR G  K D   WVLCR+Y+++
Sbjct: 134 WIMHEYRLI---------EPSRRNGSTKLD--DWVLCRIYKKQ 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g06830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK6	7.7e-71	66.84	NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2...	[more]
A2YMR0	2.0e-34	42.33	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q8H4S4	3.4e-34	42.33	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
A0SPJ6	7.1e-32	41.08	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]
A0SPJ8	9.3e-32	42.22	NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NA...	[more]

BLAST of Cp4.1LG04g06830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531750.1	3.90e-142	100.00	NAC domain-containing protein 104-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927773.1	8.57e-134	96.86	NAC domain-containing protein 104-like isoform X1 [Cucurbita moschata] >KAG70225...	[more]
KAG6588788.1	2.46e-133	96.34	NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022988957.1	1.24e-132	94.33	NAC domain-containing protein 104-like [Cucurbita maxima]	[more]
XP_011658766.1	2.96e-110	77.72	NAC domain-containing protein 104 [Cucumis sativus] >KGN43677.1 hypothetical pro...	[more]

BLAST of Cp4.1LG04g06830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELY5	4.15e-134	96.86	NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JEG2	6.00e-133	94.33	NAC domain-containing protein 104-like OS=Cucurbita maxima OX=3661 GN=LOC1114861...	[more]
A0A0A0K5V4	1.43e-110	77.72	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV...	[more]
A0A1S3C0L6	1.61e-109	76.73	NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 S...	[more]
A0A6J1HIE6	8.09e-109	75.98	NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Cp4.1LG04g06830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64530.1	5.5e-72	66.84	xylem NAC domain 1	[more]
AT1G52890.1	4.0e-30	43.56	NAC domain containing protein 19	[more]
AT3G15510.1	4.0e-30	42.33	NAC domain containing protein 2	[more]
AT1G01720.1	6.8e-30	42.94	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15500.1	8.9e-30	44.17	NAC domain containing protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 20..165 e-value: 3.4E-35 score: 123.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 5..159
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 12..126 e-value: 3.3E-30 score: 105.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 11..160 score: 41.796127
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 8..185
None	No IPR available	PANTHER	PTHR31719:SF134	NAC DOMAIN-CONTAINING PROTEIN 104	coord: 8..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g06830.1	Cp4.1LG04g06830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048367	shoot system development
biological_process	GO:0010089	xylem development
molecular_function	GO:0003677	DNA binding