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Cp4.1LG04g06240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTTATAATTAATTTATAAACGAAATTTCTATTCGCTTCTTCTTCTTGCTTCTTCTTTCTTCTTCAATTTCCTTCAATTTCCTTCAATTTCCTCCATCCTCCATTTCCATTTTGAAGGAAATTATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGTGAGATCCCTTCTTCTTCTGATTTCCCTTCTTCCATTTTCATTCCATCTCATTCTTTCTTCTCTTTGTAGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCCCCGCCGCCCCATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGTTCGTTTTCCCCCCCTTTTCTTTAATTTCTTTATGGTTATTACTCTGCGGATGATCGTTTTCTTGATTCATTGATTGATTGATTCTGTTTTGTGTAAATTGCTTGGATTTGAAGAGATGAATGTTTGTGGAATTATTTGGATTTTTAGTTTAGGAATTCGATCAGTTTTGAACCTTTTCTTGTTAAGAAATTATTGGTAGATCAGTTTAAGCATCAATTGATTTAATTTAACATTTCTAATTTGTTCGAAGGGGCAATTTTGAACCAATGCTTTATTGTTCTTGTTATCATGAACTAAGCTGCATTTTTCTTTGTTTAGGAAGAAAAGGAGGAAGGTAGATTGATGAATTGGATGGTTTTTTAGTTAAGTTATGGATGGAAGAACGTAACAATCTCGTTCTCGTTCTTGTTCTTGCTTTCGGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGTTGGAGGAACTAGGAAGTTCTTTTGATTTGAGTTCGGGATAGAGTCATTTGGCATACTTGTTTTATTGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCAAGTGTTTGAGAGGGAATTGGACTGTTTTGTAGTTAAGTTATGGATGGAAGAACTTAACAATCTCGTTCTCGTTCTTGTTCTTGCTTTCAGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAGGAAGTTCTTTTGATTCGAGTTAGGGATAGAGTCATTTGGCATACTTGTTTTATTGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCAAGTGTTTGAGAGGGAATTGGACTGTTTTGTAGTTAAGTTATGGATGGAAGAACTTAACAATCTCGTTCTCGTTCTTGTTCTTGCTTTCAGGATTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAGGAAGTTCTTTTGATTCGAGTTAGGGATAGAGTCATTTGGCATACTTGTTTTATTGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTCAAGTGTTTGAGTGGGAATTGGATGGTTTTATAGTTAAGTTATGGATGGAAGAACTTAACCATCTTGTTCTCGTTCTCGCTTCCGGGATTTTCTTGGAATGTAAAAGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGGATAGAGTCATTTGGAACACTTGTTTTATAGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAACAGTAGAATTTTTTGAGTGTTTGAGAGCAAATTGGACGGTTTTGTAGTTAAGTTATGGATGGAAGAACTTGACAATCTTGTTCTCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAACAAGATTGTTGTTCTATGGTGGAGGAACTAAGAAGTTCTTTTGAATCCACCCTTTCAAGTATTTGGCTTTTATGGTCCGGTATTTGGCTCGAGAGAAACAATAGAATTTTTCGAGTGTTTGAGAGGTCGAGGTGTGGGATATGGTTAGATTTAACTGTCCTTCATCTAACCATAGTATGCGTTTATTAGTTAATGATTCTTGGTCTTGTTCTTCAAAGATCCCTATTTTTTGTCTCAAATTTTTTCGGTTTATTAGAACCGTTTTTTTATTTATTACATAAGTAGCGAACAAGTTCAATAAATTTATAATCTATTAATGTTCTCGTGCACGAGATAGCCGAAGAAACCCGCTCTCCTTCGAGTGTGTTTTGTCGGTTTCCTACTCGTTTTCATTTTGTGTAGAACTTGATTTTCTTAGCAGAGCTTATTATATGCCATTTTCCTCTTCCGTTTTGCAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCG TATTTATAATTAATTTATAAACGAAATTTCTATTCGCTTCTTCTTCTTGCTTCTTCTTTCTTCTTCAATTTCCTTCAATTTCCTTCAATTTCCTCCATCCTCCATTTCCATTTTGAAGGAAATTATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCCCCGCCGCCCCATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGCTACACTGTGTTGTTGTTGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCG ATGAGTTACCCTTACAGCCACCACCATACTCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCCCCGCCGCCCCATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGCTACACTGTGTTGTTGTTGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCG MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGCYTVLLLSAWPVSDRRCEIGVVRFAWPCSVRVYDYEAVP Homology
BLAST of Cp4.1LG04g06240 vs. NCBI nr
Match: XP_022928579.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_023529271.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG6588871.1 hypothetical protein SDJN03_17436, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185 bits (469), Expect = 3.35e-58 Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184 bits (466), Expect = 3.13e-57 Identity = 89/97 (91.75%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. NCBI nr
Match: XP_022989747.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]) HSP 1 Score: 181 bits (458), Expect = 1.59e-56 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147 bits (371), Expect = 3.16e-43 Identity = 71/91 (78.02%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146 bits (368), Expect = 9.92e-43 Identity = 71/94 (75.53%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. ExPASy TrEMBL
Match: A0A6J1EL88 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111435344 PE=3 SV=1) HSP 1 Score: 185 bits (469), Expect = 1.62e-58 Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. ExPASy TrEMBL
Match: A0A6J1JGP0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486738 PE=4 SV=1) HSP 1 Score: 181 bits (458), Expect = 7.71e-57 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1) HSP 1 Score: 147 bits (371), Expect = 1.53e-43 Identity = 71/91 (78.02%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1) HSP 1 Score: 147 bits (371), Expect = 1.53e-43 Identity = 71/91 (78.02%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. ExPASy TrEMBL
Match: A0A1S3BP97 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103491722 PE=4 SV=1) HSP 1 Score: 142 bits (357), Expect = 1.83e-41 Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10 Identity = 51/122 (41.80%), Postives = 58/122 (47.54%), Query Frame = 0
BLAST of Cp4.1LG04g06240 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein ) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09 Identity = 49/118 (41.53%), Postives = 54/118 (45.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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