Cp4.1LG04g05240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g05240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cyclic nucleotide-gated ion channel 18-like
Location	Cp4.1LG04: 6008673 .. 6028011 (-)
RNA-Seq Expression	Cp4.1LG04g05240
Synteny	Cp4.1LG04g05240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTAATCAATTTGTTGAAATCGAAGGTACTTTCTTTGTTCAACTTAATGATTTGTCTGACTTGAAGATCAATGCATAATTATTTTTTTCATTAATAATATCATGCAGGACGGTCCAGTTCATGTAAAGTTTGTTGTAAACAATTAGGGATGCATGATATATAACCACACAACCCACTAAGGTAAGCCATTGCTTTTACAAAACTTTTATCATTCTATTTACCGGTCAAACTTTAACAAAAATAGTTAATGTTCACTTTTAATGGTTTCAAATTATCCATATCTAATTGGTTTGACATTATTGTTCATATTTCCTTTGCTATTGGAGAAGATTTTGATTAATAACCATGTTACGAAAATTTCAGATGGAAAGGGAGGACATAGATCTAATAAAGTTGTGTTCAAGGAATCCAACTCTGGTNAAATATTTTCACCGACCAACTTTTAGTAATGATGAGAGTATTCTGGACTGTTTTAGGAGTTTTTTTTTATACATAGTTTAAAATATTTTCACAGACCAACTTTTAGTAATGATGAGAGTATTCTGGACTGTTTTAGGAGTTTTTTTTTTACATAGTTTAAAATATTTTCACAGACCAACTTTTAGTAATGATGAGAGTATTCTGGACTGTTTTAGGAATTTTTAACCTCTAAAATTATGGACAGGATAAAATATTAGTTTTAGTATTTTTTTTTAATGATTATAGATTGATTTGTGTTTTCTAATATACTCTGTCTTTTATCTAAATTCTATCGAATAATTATGAATGGTGGATAAATAAATTTTTTAATTTTTTTTTTAAATTAACAATCAGACAACTCAACTCGAAAATAGAGAGTTGGATTGAGTAAAAAATCCCTCCACCCAACTCCGACCATGTACACCCTACTTGAACATTTGTATTTTGCCAAGTTCACGTGACATTTTTTTCTCTTCTTCCCTCGAACCTTCAAGTATTGAGTAGGAGACGTGTACAGTCTACCAGTAGGATCCAACTAGAATTATAAGAGTTCTATTAATTTTCTGAACTCGAGTAGAGTAGATTATATTTGGGTCTGTTGTACAAATTCTCTTTAGAAAAAGAGAGAAAAAAAGAAAAAAAAAAAAATTATCAAAATAAAATCGGAAAAATCCCTAAAACTACGGAAGATAGTCGTTTGTATCGTCGACGGTTTTCCACGGTCAGAGTCAAATGGTCTTCAGAGCCGTTACCCCCCGCTTATTCGGACGCCAGCTGTCTCGGCTCCCGCGGGGATCATATATATCCCTCCCGCACTCACACTCTCTTCTTCAGGACACATTCTCACACTAGAATCAGAGCGCTCCATCAACGGCCTCTTCCCTTCTGAACGATGTTCCTTGCCGAATTCAACCGCTAGATAATTACCAAGCAATCGGAGGAAGAGAGAGCAGAATCGAAAGGAGTTTCTCGCCTGATCCCGGTGATGAAAAATAGAGGTAATGTAAGATTGACTACTCTGTTCTGGGTTGAAATTGTAAAGGCACAGCCGGCTATTCCGATTTAGGGGTTTATTGGAGAAATTCAGAGATTATTCTGATTTAGAGGTTCACTCGAGCAACTTCAGAGGTTAATCGAACGATCGGATCGTTCTTTTTCTTTTTTTGCCTGTTATCGACACCTTTTGTATTTTTCGTGGTTTCGATTATGGAGGATTAGGGCATTTTTAGTAGGTTTATTGTTCGTTCCCATGGTAACGTGATTCTTGACTTGGATTATTCTTCGTTTCATTCNTTGAAAGGGTTCATGAGTAAGAAATTAAATTACGTTTTTCTATTTTATGAGTGTTTTAGGTAGTTAGTGAAACCGAGTGAAAAGCCAGACTTCTGCAATTATAATAAACCCCATGAATCTATCTCAACGTTCCAATTTCCATAGAGACAATGTAAAACTCAATGATCTAAGAATCCCATTTCAAATCAATCAATCAACTAAGAGCACATCATTGGTCATTACATACTCCACATTCGACAATAAGAGAAACCGTGCCACAACATATAGGCGAATTGCCCACAAAAGTTGTAGAAAACGAACAGACCCAAGTAACAAAACGAACAAGAAAAAAAAAAAAAAAAACTAAATTCAGAAGAATCGTTCATGAATAAGAGGCAATGATGAGTGGTGAGGTGAAGAAAGAGAGAAATAGGAGAAAGGGGTGGGAAGATTAGGGCTGGTGCAGACTCATCTGGGTATGTGGAAGGGAAGGCTCAGAGTATAGAGAGCACTCTGAGTTTGTCCTTTCCCTCACCATTTCAGTTTCATTGCGCCCCTCATTTTGCTTGTTTGGCTTATGACTAGGTTTTCTCCAATGTTTCATTGCCACATCATCAATATAACAATTTATTCTCATTATCCTTCCAGGGTAAAGGATTAAGCTTGCAAAACCAGGGTAAAGGATTAAGCTTGCAAAACCAAGAAAAGAACTTAAGACCCAAAGAACTTGTCTTATACAAGAAGGAGCAAAATGAACATCAAAGATACGACCTTGAAGGAACAACCTTAATTATGTCAAGGTTTGTTGAACATAAAGATGATAAGCTGTACACGATATAAGGAAACACAAGGATAGCCAAGAAAGACTTGTCAATCTCAACAAAGGATGTTGAGCTGACACTCAAAAGGAACAAATGCTGGAACTAGAAAACGCCTCAAGGCATAAGTTAAGAACTAAATGCTAAGGGCTGATAATAAAGATTATGGAAGGCCAAAGGTATTACAAGACTTTCAAGAAAAGAAACGTAAGAACTAAAAAAACCCGCCTTGTACAAGAAGGAACAAAAGGAACATGTAAGATACGACCTTGAAAGATGATAAGCTTTACGATATAAGGAAACACAAGGATGACCAAGGAAGACTTGTCAATCTCAACAAAGGATATTGAGAAGACACTCAAAAGGAACAAATGTTGGAACGGGAAGACGAGCATAAGTTAAGAACTAAGGGTATGATTATAAGGCTTATGGAAAGCCAAGAGTAGTTACAAGGATTAAGGAAAGCCTAGTAATACCGACAAAAGAAGAACTTAAAACCCAAACAACCTAAGACTTGTCAATTTCAATAAAGGATGTTGACAAGACAGTTAAAATGAACAAATGCCGGAACGAGAAAATGTCTTAGGGAATAAGATAAGAACTAAAGGCTACAAGGCTAATTGCAAGGATTATGAAAGGCCAACGGTAGTTACAACGATTAAGGAAAGCCTTTAATATCAAGAAAAGAAGAACTTGAGACCCAAAGAACCCATGTTATACAGGAAGGAAAAAATACATCTAATATAAGACATGACAATCTCAACAAAGGATGTTGAGAAGACAATCGAAAGGAACAAATCTTGGAACAAGTACATGCCCTAAGACTTGTTAAGAACTAACGGCGACAAGGGCTTTATAAGGATTATGGACGACCAAGGAATGTTACAAGGATTAAGGAAGACCTTGTAATATCGAGAACAGAAGAGATTAAGACCCAAAGAACCTGCCTTGTACACTGCTTAAGACATAAGTTAAGAACTAATGGCCACCAAGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGCTTTGGAAAAACTTTGTGATATCGAGAAAAGAAGAGCTTAAGACCCAAAGAACCTACCTTGTACACGCCTTAAGACATAAGTTAAGAAGTAACGGCGACAAGGGCTGAGTATAAGAATTATGGACGACCAAGAGATGTTACAAGAATTTAGGACGACCTTGTAATCTTGAGAAAAGAAAAGATTAAGACCCAAGAAACTTCCTTGTACACGCCTTAAGCATAAGTTCAGAACTAACGGCCACCAGGGCTGGTTATAAGGATTATGGACGACCATGAGGAAGACCTTGTTATACCGAGAAAAGAAGAGCTTAAGACCTTAAGAACCAGCCTTGTACATGCCTTAAGACATACTTTAAGAACTAACGGCGTCAAGGGCTGATGATTATAAGGATTATGGATGACCATGGAATGTAACAAGGATTAAGGAAGACCTTGTAATACCGAGAAAAAAAGAGCTTAAGACCCAAAGAACCTACCTTGTACACGCCTGAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGTTTATGGACGACCAAGGGATGTTACAAGGATTAAGGAAGACCTTGTAATACCGAGAAAAGAAGAGCTTAAGACCCAAAGAACCTGCCTTGTACACGCCTTAATTCATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTAAGGAAGTCCTTGTAATACCGAGAAAAGAAGAATTTAAGACCCCAAAGAACCTGCGCTGTACACGACTTAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTAAGGAAGTCCTTGTAATACCAAGAAAAGAAGAGCTTAAAACCCAAAGAACCTTCCTTGTACACGACTTAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTAAGGAAGTCCTTGTAATACCGAGAAAAGAAGAATTTAAGACCCCAAAGAACCTGCGCTGTACACGACTTAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGAATTTAGGAAGACCTTGTAATACCGAGAAAAGAAGTGCTTAAGACCCAAAGAACCTGCCTTGTACACTACTTAAGACATAAGTTAAGACCTAACGGCCACCAGGACTGATTATAAGGATTATGGACGACCAAGGGATGTTAGAAGGATTAAGGAAGTCCTTGTAATACCGAGAAAAGAAGAATTTAAGACCCAAAGAACCTGCGCTGTACACGCCTTAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAAGATTAAGGAAGTCCTTGTAATACCGAGAAAAGAAGAACTGAAGACCCAAATAACCTGCCTTGTACACGCATTAAGACATAAGTTAAGAACTAACGGCCACAAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTTAGGAAGACCTTGTAATACCGAGAAAAGAAGTGTTTAAGATCCAAAGAACCTGCCTTGTACACGCCTTAAGACAGAAGTTAAGACCTAACGGCCACCAGGGTTGATTATAAGGATTATGGACGACCAAGGAATGTTACAAGGATTAAGGACGTCCTTGTAATACCGAGAAAAGAAGAGCTTAAAACCTAAAGAACCTGCCTTGTACACGCCTTAAGACATAAGTTAAGAACTAATGGCGACAAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTAAGGAAGACCTTGTAATACCGAGAAAAGAAGAGTTTAAGACCCAAAGAACCTGCCTTGTATACACGCCTTAAGACATAAGTTAAGACCTAACGGCCACCAGGGCTGATTATAAGGATTATGGACGACCAAGGGATGTTACAAGGATTTAGGAAGACTTTGTAATACCATGAAAAGAAGTGCTTAAGACCCAAAGAACCTGCCTTGTATACGCTTTAAGACATAGGTTAAGAATTAACGGCGACAAGGGCAAATCTTCCAACATTCGATATGATCTTGAAGTCTGCAGCACATTGGATTAACGGCGACAACGGCGACAAGATCCGACCATTGGATTTACCCCAAATTTGGATATGATCTTGAAGACTCAGATATCTTTAGATCTAATGGCTGGTGTTCAAAGTTGAAGTCTGCAGCACCCTCATCGGAGTAGATTTTTTCACTGGACCTTCCAAAATTTTCAAGTTTAAAATCAACACCATTCTAGATGTTTCAAGGTTGGTGCAAGCTTCATCTACAAATAAGGTGACATGGGCAATGTATAGGTACAAGTAGAGAGTACAAGGATTAATGAAGGCCAAGGGTGGTTACAAGGATTAAGGAAGACCTTGTTACACCCAGAAAAGAAGAACTTAAGACCCTAAGAACCCGCCTTGTACAAGAAGGATTAAAAGAACTACGGTTATTATTTATAGGCATGTTGAACATATGGAAGAAGATAAACTCTAAGATACAAGGAAATGCAAGAATGACAAAGGAGGACTTTTCAATCTCAACCAAGAATGTTTAGAAGACAGCCAAAATGGGCAAATGCTAGAACAAGTACATGGCCTTAAGGCCTAAGTTAAGAACTAAAGGTCACAAGGGTAGATAATAAGGACATGTCAAAGAATGAAAACCCTATAAAAGGACTCTCAAGAAACTTGGAATGACATAACTTAAGGACAAGAACCCCAAGACAAGGTAAGAAAAATGAATTTTTGGGGACAAAGAACCCCAAGACAAGGTAAGAAAAAATGAATTTTTGGGGACAAAAGTTCTAACGAAGGGGAGAATTTGCAAGACCCCAAGTAAGGTTGAGACACTCAAGTTAAAGTTGTAAGAGACCCAAGGAAGGTTAAGGAGTTGAGATTTTCAATGCCCTAACAATGAATTATAAGCATCTCAGGCCATTGGAAAAGGTTTGAAAAGAAATACTAAGCATAAACGGCAAAAAAAAAATGTCATTTTTTCAATTTTAAGTAAACTTCTCAAATTTTTAATTTTTTATGGTGAAGAAATTTCAAGATGCTGAAGACGGAAAAATGACCAAAAATGGGTAAATAGTTTTTGGAAAGAATTTAGATTTTTTTCAAAATGTGGCAAATTACCGAAATACCCCTAGCTTCCAATTATTTCAAAAATGCACCTGACCAGAAATCTTTCCAGATTGGTTTACAGCAGGGGTCATCTGGACAAAATCTTTCATATCTCAAGATTCAACTATTGGATTTGTCCCAAATTTGGAAAGGATCTAGAAGACTCATATATGTTCAAATCTAATGGATGGTGTTGAAAAATGATGTCGGAAACATCCTCATCGAAATAGATTTTTCCAATGGACCTTCCAGATGTTTCAAGTTTAAAATCAGCACTATTCTGTATGTTTCTAGTTCGTTGAAAGCTTCATCCACAAATAATAATGTGGGCAACGTTTAGGGACAAGAGTGGAGGCTCGAGAGTAGAAGGATTAAGGAAGGCCAAGGGTAGTTACAAAGATTAAGTACGACACCAAGAAGAAACTTAAGACCCTTAGAACCCCTTGTGCAAAAAGAAATAAAAGGAACCTCTAAGATACAACCTTGAAGGAACAATGTTGATTATGTCGAGACTGGTTGACCACTGGTTGACCATAAGATAAGCTATAAGATATAAGAAAACTCAAGGTATTATATGACATTTAACTTTTGAAAGCTACCTTGTGTGGAAGTCATGGCTTGGTCACCTTGATGAATGCAACCCAACTTAATACTAGGATAGAAATGTAGCCAACATGTTACTAACTTCAGCCACTGCTTTTGTTTTGTCTTTATTATGTTTTACGTTTTGGTTTGTTTTCATTGGTAAATTGACTCAGTATACATGTTTATTCTTTATATATTTGTGCATACTCACTCCTGTATCCTCTCGTCATCGAACCATTCACAACTTAATGCATTATAGGATCCTCTTTGACTTCCACTATTATTTTGTGACGCACTCTTTAATAGAATGAGTTCTAACATTAAAGCGCCATAAATTCTACTCTAATCACAGCGAATTAGCTCTTGGTCAGCAGTAAGAATTCAATTGTCCACAAGCTTCTTAAATCATTGACCGAATCATCGACTCAATAGCAAGAGAAATAAATTTTACTGCTGACCAAGAGCTAATTCGCTGTGATTAGAGTAGAATTTATGGCGCTTTAATGTTAGAACTCATTCTATTAAAGAGTGCGTCACAAAATAATAGTGGAAGTCAAAGAGGATCCTATAATGCATTAAGTTGTGAATGGTTCGATGACGAGAGGATACAGGAGTGAGTATGCACAAATATATAAAGAATAAACATGTATACTGAGTCAATTTACCAATGAAAACAAACCAAAACGTAAAACATAATAAAGACAAAACAAAAGCAGTGCCTGTAGTAAGTAACATGTTGGCTACATTTCTATCCTAGTATTAAGCTGGTTTGCATTCATCGAACAAAGATCGTTTTCAATCTACAAAGCTTGAATGTCACGTCCTAGTTCTATGCTCCCAAGTTCTTTCGCACTTGTAGCCTAAAAAACGCCATTGTTTTTGGTTCCATTCAAANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACAGGATGCTGTGAAATCTGTTTACAGATTGATGAAGATTGAGTGTGTCAAAGAAAGTCAACGTGACGACTTGGTGATTGAGTTTTTTTGAGTTATGTGAGAAGTGTCGAAGAAGAGAGAGAAATGAGGCCTTTTGGGAAAACCATGAGAGTTTTATGCTGAAAGTGGACAATATCATACAATTGTGGAAATCGTGGTTTCTAACATGGTATCAGAGTCATGCTCTTAACTTAGCCATGTCAATAGAATCCTCAAATATCGAACAAAAAATTGTGAACCTTGAAGATGTAGTCAAAAGTGACTCAAGTGTTGAACAAATGGTGTACTTTATTCGAGGGCTTCAGAGAAAGAAGTCAAACCTCGATTAAAGGTAGGATGTTCGAGGAATCCATAGGCCTCAGGGGAGGCTTTATGGTGTACTTTGTTTGAGGGGAGGATTGTTGAGGATTATTGAAAGGAGTAGTCCCACGTTGGCTAATTAAGAGGAAGATCATAGGTTTTATAAGCAAGGAACACTATCTCCATTGGCATGAGGCCTTTTGGGAAAACCAAAAGCAAAACCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTCGTGGTTCCCAACACACCTGTCATGAAGGCTTCAACCCCAATCTGCATCAGAATATGCTATAATCTGAGAATCACATGATGATTAGATTTGCGTAAACCATGAAGTTTCGTTTAGATATCTTTTGACTGCTGTAATGGATGTGTATGTTCTCATATCTATGACCGACATAAGTTCTTGATTATTAAACTCATTTGACAAAGCTTTATGTTTGTGTTGGTTTAGATATAAAAATACCGCTTTTAGACATTGTCTGCAGAGTAATCTGGAACCATTAGCCATAGAGATTAAACTATTCACAATAGGAGACATAACTGATGTGTTTGAGTTGAGATCCAAGGAGTGGTAGCTTCAACTGATAGAGACTTTTGTATGTTGTACATTTCCTATTTGGTAGCTTCAACTGATAGAGACTTTTATATGTTGTATGTTGACCAGATTTGTATGTTGTATGTTGACTTTTTCTTAAACATTTCCTATTGTTTTTGTAGACGGAGATGGATTGTTAGAGCTGATGTTCTTTTTCGAATAGCATAATCAAAGTATAGTGTTGAACAAGTTAGCGTAGCTATTGAGTTCTATGATGCACTCAATGGAGTTCGTCATTGATCTTGGAGTGGTAGCTTCAACTGATAGAGACTTTTGTATGTTGTATGTAGACCAGATTTGTATGTTGTATGTTGACCTTTTCTAAAACAATTCCTATTGTTCTTGTAGATGGAGATGGATTGTTAGAGCTGATGTTCTTTTTTGAATAGCATAATCAAAGTATAGTGTAAAACATGTTAGCGTAACTATTGAGTTCTATGATGCACTCAATGGAGTTCGTCATTGATCTTGCAACTATGAGACACAATTGATGTGTTTGAGTTGAGATTGAAACATTTCCTATTGTTTTTGTAGACGGAGATGGATTGTTAGAGATGATGTTCTTTTTCGAATAGCATAATCCTATGGAAAAAAAATGCTAGATGTGCTCAATTAGGTGAAATTTTTGAATTAGATCGTACTACTTGATGCTAGGACCTTGTTCGAAGACGTTTTTGCTGGGATTGACCCATGGTTAGCTCCCTGAAAGTTCTAGGCTTACGTTTGTTTCATGAATCCCAGGTACTCGTACATTTTGGTTATTCCCTTATGGCCTACGTGTAAGGTTACAACCCGACTGTATTATGGATAAGTATGGTCTTTTAGAAATAATTTTTTAAAAAAATCGAAAATCCAATCAAATCCAACACAAAATTAGAGAGTTCGGTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCTTTAATGATTTGAACTCGACCATATATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACGTTTATAAAAATTGGGGATATTTTTTTTAAATATAATATACCATTTTTTATTTTTTAAGTTATTACCTTGAACTGTGATATCTTTTATACCCAAACGGTAAATTTTTTGGGTTGGGTTGGTTTGATTTGTTCATGTCATTTATTTAAATTTTTGCTTTTAATAAACCAACACGAAAGACGAGAGAGGCATGCAAAGGAGTAACACAACTCGAAAATAGAGGGTTGGGTTGGGATGGGTTGTGAAAATTTTCGGGTCGGATAAAAGAGAATCCTTCAACCCAACCCAACTCGGACCGGACCATGTACACCCCTAACAAAAGAACTCCACAACAAATGGCGGCCCATCTGGGTTCTTCAACTCCACACTAAAACCAGGTGATTTTGTGGTGAAGAACTATTGATGTGGGCTTTGATGCCAAGTTCCAGTTTGAATATGCTTTCTTCTACTTATAACTGTCCAAACGCTTACAGAAGGCGAAGCCTTTGCTCTTCGAGCCGAGGTCGACCTCATGTTCGTTGCTGAGCAATTCAAACGCCTGCATAGCAACAGCTTCGACATACCTCTAGCTTGATTCTAGTAGCTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAAGTTAAACACGCATTGAACCGTGGTACACGTACACACCTTGAAAACTAGCTTGCCATCTTTATACCAAAGATGATGTATAGATGAAAACTGTGTAGTGACTAGGCTCTGATACCTTGTAACAGAGCCTAGTCACCAGATATTGTCCTCTTTGGGCTTTTCTGGTCCTCTTTGGGCTTTTCTGGTCTGGTGATTAGGCTCTGTTACAAATGGTATCAGAGTCTAATCACCAGATATTGTCCTCCTTGGACTTTCCCTTCCGGACTTTCCCTCAAGGTTTTAAAACACGTCTAGTAGGGAGAGGTTTCCACACCCTTATAAGCAATGTTTCGTTCCCCTCTCCAACTAATGTGGGATCTCACGATCCACTCTCCTTGGGGACTTAGCGTCCTTACTGGCACACCGTTCGGTGACTGGCTCTAATACTATTTGTAACAGCCCAACNGGAGACATAACTGATGTGTTTGAGTTGAGATCCAAGGAGTGGTAGCTTCAACTGATAGAGACTTTTGTATGTTGTACATTTCCTATTTGGTAGCTTCAACTGATAGAGACTTTTATATGTTGTATGTTGACCAGATTTGTATGTTGTATGTTGACTTTTTCTTAAACATTTCCTATTGTTTTTGTAGACGGAGATGGATTGTTAGAGCTGATGTTCTTTTTCGAATAGCATAATCAAAGTATAGTGTTGAACAAGTTAGCGTAGCTATTGAGTTCTATGATGCACTCAATGGAGTTCGTCATTGATCTTGGAGTGGTAGCTTCAACTGATAGAGACTTTTGTATGTTGTATGTAGACCAGATTTGTATGTTGTATGTTGACCTTTTCTAAAACAATTCCTATTGTTCTTGTAGATGGAGATGGATTGTTAGAGCTGATGTTCTTTTTTGAATAGCATAATCAAAGTATAGTGTAAAACATGTTAGCGTAACTATTGAGTTCTATGATGCACTCAATGGAGTTCGTCATTGATCTTGCAACTATGAGACACAATTGATGTGTTTGAGTTGAGATTGAAACATTTCCTATTGTTTTTGTAGACGGAGATGGATTGTTAGAGATGATGTTCTTTTTCGAATAGCATAATCCTATGGAAAAAAAATGCTAGATGTGCTCAATTAGGTGAAATTTTTGAATTAGATCGTACTACTTGATGCTAGGACCTTGTTCGAAGACGTTTTTGCTGGGATTGACCCATGGTTAGCTCCCTGAAAGTTCTAGGCTTACGTTTGTTTCATGAATCCCAGGTACTCGTACATTTTGGTTATTCCCTTATGGCCTACGTGTAAGGTTACAACCCGACTGTATTATGGATAAGTATGGTCTTTTAGAAATAATTTTTTAAAAAAATCGAAAATCCAATCAAATCCAACACAAAATTAGAGAGTTCGGTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCTTTAATGATTTGAACTCGACCATATATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACGTTTATAAAAATTGGGGATATTTTTTTTAAATATAATATACCATTTTTTATTTTTTAAGTTATTACCTTGAACTGTGATATCTTTTATACCCAAACGGTAAATTTTTTGGGTTGGGTTGGTTTGATTTGTTCATGTCATTTATTTAAATTTTTGCTTTTAATAAACCAACACGAAAGACGAGAGAGGCATGCAAAGGAGTAACACAACTCGAAAATAGAGGGTTGGGTTGGGATGGGTTGTGAAAATTTTCGGGTCGGATAAAAGAGAATCCTTCAACCCAACCCAACTCGGACCGGACCATGTACACCCCTAACAAAAGAACTCCACAACAAATGGCGGCCCATCTGGGTTCTTCAACTCCACACTAAAACCAGGTGATTTTGTGGTGAAGAACTATTGATGTGGGCTTTGATGCCAAGTTCCAGTTTGAATATGCTTTCTTCTACTTATAACTGTCCAAACGCTTACAGAAGGCGAAGCCTTTGCTCTTCGAGCCGAGGTCGACCTCATGTTCGTTGCTGAGCAATTCAAACGCCTGCATAGCAACAGCTTCGACATACCTCTAGCTTGATTCTAGTAGCTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAAGTTAAACACGCATTGAACCGTGGTACACGTACACACCTTGAAAACTAGCTTGCCATCTTTATACCAAAGATGATGTATAGATGAAAACTGTGTAGTGACTAGGCTCTGATACCTTGTAACAGAGCCTAGTCACCAGATATTGTCCTCTTTGGGCTTTTCTGGTCCTCTTTGGGCTTTTCTGGTCTGGTGATTAGGCTCTGTTACAAATGGTATCAGAGTCTAATCACCAGATATTGTCCTCCTTGGACTTTCCCTTCCGGACTTTCCCTCAAGGTTTTAAAACACGTCTAGTAGGGAGAGGTTTCCACACCCTTATAAGCAATGTTTCGTTCCCCTCTCCAACTAATGTGGGATCTCACGATCCACTCTCCTTGGGGACTTAGCGTCCTTACTGGCACACCGTTCGGTGACTGGCTCTAATACTATTTGTAACAGCCCAACAAGCCTACCGCTAGCAGATATTGTCCTCTTTGAGCTTTCCCTTCCGGGCTTCCCCTCAAGGTTTTAAAACGCATCCACTAGGAAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCCACCGACATGGGATCTCACAATAATATACTATGATTACTACAAACGTTTGAATCAAATCAAGCACAAAACAATAAAATGATATCAATATATCCATAGGGAAACAAAATCAACTTGTTCCCTAAACCTCCAATTTTTGTATTTATAATATTCACACCCTCAATATCATAGTTTCAAGTGGATCTCAAAGAATATTGCAGTCACTATAAGCTATAGGCAGAAATAGCAAAAACTACACACTTCAACCGTATTTGCAGTACCTCAAAAGTTTTCAAAGAATTTACAAACCAAACCAAAAGAAAGGGAAAGAATAATAGCTATCATGGATATACGCTAGCCGCGCTAANTTTCTAAAACAATTCCTATTGTTCTTGTAGATGGAGATGGATTGTTAGAGCTGATGTTCTTTTTTGAATAGCATAATCAAAGTATAGTGTAAAACATGTTAGCGTAACTATTGAGTTCTATGATGCACTCAATGGAGTTCGTCATTGATCTTGCAACTATGAGACACAATTGATGTGTTTGAGTTGAGATTGAAACATTTCCTATTGTTTTTGTAGACGGAGATGGATTGTTAGAGATGATGTTCTTTTTCGAATAGCATAATCCTATGGAAAAAAAATGCTAGATGTGCTCAATTAGGTGAAATTTTTGAATTAGATCGTACTACTTGATGCTAGGACCTTGTTCGAAGACGTTTTTGCTGGGATTGACCCATGGTTAGCTCCCTGAAAGTTCTAGGCTTACGTTTGTTTCATGAATCCCAGGTACTCGTACATTTTGGTTATTCCCTTATGGCCTACGTGTAAGGTTACAACCCGACTGTATTATGGATAAGTATGGTCTTTTAGAAATAATTTTTTAAAAAAATCGAAAATCCAATCAAATCCAACACAAAATTAGAGAGTTCGGTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCGGGTTGTGAACTCTAATCAGGTTGTTTTGGTTACCAACCTGACACAATCCAACTCGCCCCAATTCTTTAATGATTTGAACTCGACCATATATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACATTCTTTATTTTCCCTAAAATGAATTTAGAAAAAGCTAATAAATGATAAAATTTTAACATTTTCCATCCATTTTAAACGTTTATAAAAATTGGGGATATTTTTTTTAAATATAATATACCATTTTTTATTTTTTAAGTTATTACCTTGAACTGTGATATCTTTTATACCCAAACGGTAAATTTTTTGGGTTGGGTTGGTTTGATTTGTTCATGTCATTTATTTAAATTTTTGCTTTTAATAAACCAACACGAAAGACGAGAGAGGCATGCAAAGGAGTAACACAACTCGAAAATAGAGGGTTGGGTTGGGATGGGTTGTGAAAATTTTCGGGTCGGATAAAAGAGAATCCTTCAACCCAACCCAACTCGGACCGGACCATGTACACCCCTAACAAAAGAACTCCACAACAAATGGCGGCCCATCTGGGTTCTTCAACTCCACACTAAAACCAGGTGATTTTGTGGTGAAGAACTATTGATGTGGGCTTTGATGCCAAGTTCCAGTTTGAATATGCTTTCTTCTACTTATAACTGTCCAAACGCTTACAGAAGGCGAAGCCTTTGCTCTTCGAGCCGAGGTCGACCTCATGTTCGTTGCTGAGCAATTCAAACGCCTGCATAGCAACAGCTTCGACATACCTCTAGCTTGATTCTAGTAGCTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAAGTTAAACACGCATTGAACCGTGGTACACGTACACACCTTGAAAACTAGCTTGCCATCTTTATACCAAAGATGATGTATAGATGAAAACTGTGTAGTGACTAGGCTCTGATACCTTGTAACAGAGCCTAGTCACCAGATATTGTCCTCTTTGGGCTTTTCTGGTCCTCTTTGGGCTTTTCTGGTCTGGTGATTAGGCTCTGTTACAAATGGTATCAGAGTCTAATCACCAGATATTGTCCTCCTTGGACTTTCCCTTCCGGACTTTCCCTCAAGGTTTTAAAACACGTCTAGTAGGGAGAGGTTTCCACACCCTTATAAGCAATGTTTCGTTCCCCTCTCCAACTAATGTGGGATCTCACGATCCACTCTCCTTGGGGACTTAGCGTCCTTACTGGCACACCGTTCGGTGACTGGCTCTAATACTATTTGTAACAGCCCAACAAGCCTACCGCTAGCAGATATTGTCCTCTTTGAGCTTTCCCTTCCGGGCTTCCCCTCAAGGTTTTAAAACGCATCCACTAGGAAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCCACCGACATGGGATCTCACAATAATATACTATGATTACTACAAACGTTTGAATCAAATCAAGCACAAAACAATAAAATGATATCAATATATCCATAGGGAAACAAAATCAACTTGTTCCCTAAACCTCCAATTTTTGTATTTATAATATTCACACCCTCAATATCATAGTTTCAAGTGGATCTCAAAGAATATTGCAGTCACTATAAGCTATAGGCAGAAATAGCAAAAACTACACACTTCAACCGTATTTGCAGTACCTCAAAAGTTTTCAAAGAATTTACAAACCAAACCAAAAGAAAGGGAAAGAATAATAGCTATCATGGATATACGCTAGCCGCGCTAAAGCTCCTCACATGGCTAGAGGTTCAAGAACAATGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGTACATCATATTGAAGTTTCGATATTTTCATCATTACTAAGCTTCAAGAACTCGAGACAATACCTTCCCGAGAGACGTTCTTGACGCGAAGGACAGCTTGTGCACTTAAAGGGGAGAGCTTTGATTGACAAAAGTCTTCCCAAGAGCCTTTCTCTGGATCTTCAGGCGTTGTCGTTGGGAGGTCGGTGAACTTCTCGTACACAGATTGCAGCTCCACGAGGAGGATTCGAGCTGCCTCCCTAGACTCGGGAAGCTGGTCACTGAGCTGGGATGCTGCTGTTTGAATCAATTTGTCGATTCCATATGCTTTTATCCCTTCAACACCCTATCCATAAATATGTGTTATACAAGGGAGCAGAACAGATATGAAAGTTCCAGACATAGGGACAGTGGGAAATCAGACAATGAACAGAACAAGACAGAAAAACATTTAACAGTAAACATACAGCTGAGAAACATAGGAACAAACGTTTGACATATCAAAGGCATATACAATTTGTTTGCAATTACAAAACTATGTTCAATTTTAGACATTCTTTTTCCAGATATCCAAGATCAGGGCTTGAGAGATCTTGGGAGGAGATGTTGTTTCGCACAACAACGCAGACACTCAATTTAGATGAACACAAAGAACAGAAATATTGGCTAAAGTTTTATATTGACGGGCGAGAATATAGAAAAATACCGAAAGTATATTTTCAAAGCACGGTATATATATGGTTCAATTTACTATATATAGCTTTACCATATATAACCATCTACTATATATAACTATCTACAACAGATGCGTTCTCCGGGGGTAAGAGCCAAAACTTCATGAACATAGAAACATGACGAACAAACAAGGTTCATGCTACGAATGAAGAAGCAAAATCCTCACCAGTCGTGGAACACTTCGACAAAAGCACATTGAAGCCTTGGCTCGAATTCTCGGGTTTCTATTCTTAAGAAATGGTTCCAACTTTGGTAACAATAATGCAGGGGAAAACGAAGAAGTCATTGCTACCAGAGCTTTCTCGGCAGCTTCGCACACAAAACGTTTGTCTTGAGAAGACTTCAGAAGAAGCTGCAACAACTGCACTCCATTGAAGAAGTCATTCATAGCTCAGAAAAGAGATTTCCATTGAAGAAAAATGTAAGATAAAGAAGTTAAAACTCAAACAGTGCAAGTTACAGTTACCATGGGATCTAATGATTCAATCACTTCGTCGTTATAAGCAATGAAAATATCTGCAGATGTCATAAGGGCAGTTTTGCAGACAGCACTTCTAGGATTTTTCATTGATTTCACCAAAAGTGAGATCACGTCTCCCCTGCCACAAGAAAGTATAAGAAATACTACAATGAATCGAGTAAAAAAAGAAAAACCAAATGAATCGAGTCACTATTGACGACTTACAGCATATCGAGCATGTCTTCCCTGTGATATATTGCTAGTCTTCTTGTATTATTCAATGCTTCACAAACCGAAACCCAATCTTTTGAGCCTAATCCAGCTAAGAGTGTCTGTAGTTTCAAAACGAGTAAAGATGTAGTCCAGGTTAGGTATATAACGAATCCGAGCATGAATCATCAATGATGATCGACCCAACAACTAAATTTCAGCTAAACAAATCTAGTAATGTTAATACCTTAAGGCTTGACGAAACATCTTCTAAATCGGTCAAATTCTCAGATTCGATATATTCTACTTCCGAACTACCAACCTCGGCAACAGGGTTGCTACTTTCACCATTTACTAGAGGCCTGATAGAAGCAGAGCTTTTACTTTTCAGTTCTTCAATGTTCCCATTGGCAGTCTTTATACCTGTTCCTTGTTTACTAAGATCCTCTTTACAAGAGCTTTGGTTGTTCCCTTCCAGTCCAGGCATTGAGTTAAGGACCTTAAGAGCTTCCTCTGACATGGCTGTTGCGATATACGACGCAGAGGGGAAGTCTTTTAGAGTACGAAAAACATCAGAAGCTACATATCGAAAAGTAATTAGATTCAATGATATGTTCACTACCTTAGGAAATAAGTAA

mRNA sequence

ATGATGGACGGTCCAGTTCATGATGCTGTGAAATCTGTTTACAGATTGATGAAGATTGAGTGTGTCAAAGAAAGTCAACCTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAACTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAACTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAAGCGTTGTCGTTGGGAGGTCGGTGAACTTCTCGTACACAGATTGCAGCTCCACGAGGAGGATTCGAGCTGCCTCCCTAGACTCGGGAAGCTGGTCACTGAGCTGGGATGCTGCTAACAGATATGAAAGTTCCAGACATAGGGACAGTGGGAAATCAGACAATGAACAGAACAAGACAGAAAAACATTTAACAGTAAACATACAGCTGAGAAACATAGGAACAAACGGGAAAACGAAGAAGTCATTGCTACCAGAGCTTTCTCGGCAGCTTCGCACACAAAACAAGAAGCTGCAACAACTGCACTCCATTGAAGAAGTCATTCATAGCTCAGAAAAGAGATTTCCATTGAAGAAAAATGTATATAACGAATCCGAGCATGAATCATCAATGATGATCGACCCAACAACTAAATTTCAGCTAAACAAATCTAGTAATGTTAATACCTTAAGGCTTGACGAAACATCTTCTAAATCGGTCAAATTCTCAGATTCGATATATTCTACTTCCGAACTACCAACCTCGGCAACAGGGTTGCTACTTTCACCATTTACTAGAGGCCTGATAGAAGCAGAGCTTTTACTTTTCAGTTCTTCAATGTTCCCATTGGCAGTCTTTATACCTGTTCCTTGTTTACTAAGATCCTCTTTACAAGAGCTTTGGTTGTTCCCTTCCAGTCCAGGCATTGAGTTAAGGACCTTAAGAGCTTCCTCTGACATGGCTGTTGCGATATACGACGCAGAGGGGAAGTCTTTTAGAGTACGAAAAACATCAGAAGCTACATATCGAAAAGTAATTAGATTCAATGATATGTTCACTACCTTAGGAAATAAGTAA

Coding sequence (CDS)

ATGATGGACGGTCCAGTTCATGATGCTGTGAAATCTGTTTACAGATTGATGAAGATTGAGTGTGTCAAAGAAAGTCAACCTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAACTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAACTTGGAGGAGCCTTAAGAAAAGATTGGTAAAGACATCAGCGTTGAGAGAGAGCTTATGCTACATAGATTCGATAGAACAAGATAGTGAATACGACAACGACGACACCGATGACGATACGTCTTCTGCAGACTATATGAACAAAAGCGTTGTCGTTGGGAGGTCGGTGAACTTCTCGTACACAGATTGCAGCTCCACGAGGAGGATTCGAGCTGCCTCCCTAGACTCGGGAAGCTGGTCACTGAGCTGGGATGCTGCTAACAGATATGAAAGTTCCAGACATAGGGACAGTGGGAAATCAGACAATGAACAGAACAAGACAGAAAAACATTTAACAGTAAACATACAGCTGAGAAACATAGGAACAAACGGGAAAACGAAGAAGTCATTGCTACCAGAGCTTTCTCGGCAGCTTCGCACACAAAACAAGAAGCTGCAACAACTGCACTCCATTGAAGAAGTCATTCATAGCTCAGAAAAGAGATTTCCATTGAAGAAAAATGTATATAACGAATCCGAGCATGAATCATCAATGATGATCGACCCAACAACTAAATTTCAGCTAAACAAATCTAGTAATGTTAATACCTTAAGGCTTGACGAAACATCTTCTAAATCGGTCAAATTCTCAGATTCGATATATTCTACTTCCGAACTACCAACCTCGGCAACAGGGTTGCTACTTTCACCATTTACTAGAGGCCTGATAGAAGCAGAGCTTTTACTTTTCAGTTCTTCAATGTTCCCATTGGCAGTCTTTATACCTGTTCCTTGTTTACTAAGATCCTCTTTACAAGAGCTTTGGTTGTTCCCTTCCAGTCCAGGCATTGAGTTAAGGACCTTAAGAGCTTCCTCTGACATGGCTGTTGCGATATACGACGCAGAGGGGAAGTCTTTTAGAGTACGAAAAACATCAGAAGCTACATATCGAAAAGTAATTAGATTCAATGATATGTTCACTACCTTAGGAAATAAGTAA

Protein sequence

MMDGPVHDAVKSVYRLMKIECVKESQPWRSLKKRLVKTSALRESLCYIDSIEQDSEYDNDDTDDDTSSADYMNKTWRSLKKRLVKTSALRESLCYIDSIEQDSEYDNDDTDDDTSSADYMNKTWRSLKKRLVKTSALRESLCYIDSIEQDSEYDNDDTDDDTSSADYMNKSVVVGRSVNFSYTDCSSTRRIRAASLDSGSWSLSWDAANRYESSRHRDSGKSDNEQNKTEKHLTVNIQLRNIGTNGKTKKSLLPELSRQLRTQNKKLQQLHSIEEVIHSSEKRFPLKKNVYNESEHESSMMIDPTTKFQLNKSSNVNTLRLDETSSKSVKFSDSIYSTSELPTSATGLLLSPFTRGLIEAELLLFSSSMFPLAVFIPVPCLLRSSLQELWLFPSSPGIELRTLRASSDMAVAIYDAEGKSFRVRKTSEATYRKVIRFNDMFTTLGNK

Homology

[Close]

BLAST of Cp4.1LG04g05240 vs. NCBI nr
Match: KAG8501546.1 (hypothetical protein CXB51_004044 [Gossypium anomalum])

HSP 1 Score: 53.5 bits (127), Expect = 3.97e-05
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 174 VGRSVNFSYTDCSSTRRIRAASLDSGSWSLSWDAA 208
           V R  +FSYT CSS RR+RAAS DSGSWSLSWDAA
Sbjct: 35  VERPWDFSYTVCSSKRRVRAASRDSGSWSLSWDAA 69

[Close]

BLAST of Cp4.1LG04g05240 vs. NCBI nr
Match: XP_022150094.1 (cyclic nucleotide-gated ion channel 18-like [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 8.37e-05
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 76  WRSLKKR-LVKTSALRESLCYIDSIEQDSEYD-----NDDTDDDTSSADYMNKT 123
           WR L+KR L KT A+RESLCY+DSIE+D +YD      +  DDD SSADY NKT
Sbjct: 462 WRRLQKRKLAKTLAMRESLCYLDSIEEDHDYDIELAEENYDDDDMSSADYPNKT 515

[Close]

BLAST of Cp4.1LG04g05240 vs. ExPASy TrEMBL
Match: A0A6J1D902 (cyclic nucleotide-gated ion channel 18-like OS=Momordica charantia OX=3673 GN=LOC111018354 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.05e-05
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 76  WRSLKKR-LVKTSALRESLCYIDSIEQDSEYD-----NDDTDDDTSSADYMNKT 123
           WR L+KR L KT A+RESLCY+DSIE+D +YD      +  DDD SSADY NKT
Sbjct: 462 WRRLQKRKLAKTLAMRESLCYLDSIEEDHDYDIELAEENYDDDDMSSADYPNKT 515

[Close]

BLAST of Cp4.1LG04g05240 vs. ExPASy TrEMBL
Match: A0A6J1IYP3 (cyclic nucleotide-gated ion channel 18 OS=Cucurbita maxima OX=3661 GN=LOC111481868 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.80e-04
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 76  WRSLKKR-LVKTSALRESLCYIDSIEQDSEYD----------NDDTDDDTSSADYMNKT 123
           WR LKKR L K S  R SL Y DSI+QD EYD          +DD+D+D S+ADYMNKT
Sbjct: 678 WRRLKKRKLAKKSVFRNSLSYGDSIQQDIEYDVELAEENYDDDDDSDEDMSTADYMNKT 736

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g05240 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g05240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8501546.1	3.97e-05	77.14	hypothetical protein CXB51_004044 [Gossypium anomalum]	[more]
XP_022150094.1	8.37e-05	61.11	cyclic nucleotide-gated ion channel 18-like [Momordica charantia]	[more]

BLAST of Cp4.1LG04g05240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D902	4.05e-05	61.11	cyclic nucleotide-gated ion channel 18-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1IYP3	5.80e-04	55.93	cyclic nucleotide-gated ion channel 18 OS=Cucurbita maxima OX=3661 GN=LOC1114818...	[more]

BLAST of Cp4.1LG04g05240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g05240.1	Cp4.1LG04g05240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane