Cp4.1LG04g02750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g02750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 2-like
Location	Cp4.1LG04: 7624036 .. 7625187 (-)
RNA-Seq Expression	Cp4.1LG04g02750
Synteny	Cp4.1LG04g02750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGTGTTTGTGCTGAGAATCAGAAATATCAGTTTCATTTTCAATTTCCTCCTTCTTCTTCTGATTTTGTTGTTTCTGAGAGGATTCCTTTTCTGAAGGATATTAACGTTCCGCCGAGGAAGCTTCTTGCGGCGCGACGAGATCAAAACGCTGAAATGTGTACTGATTCGCCGCGATTCTCGTTTGCTGTTGAATCGCTTTTGCAGAAGTTTTTGCCGTTCAATGGCGAGGATGAGGCGGAGGAGGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCTCGTCGGCGGGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGAGTTCCGGCGTGGTGGATGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAGTGTTGGCTTCATCCGGCGAGGTATCGGACTGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTCTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGGTGAGTAACTTTCAAGGCGGTGGCTCTTGTTCTTCGCCGAATAAGAAGAGTTCTAATCTCAGATCGGCCGCTGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACCTCCTCGCCGACGTCGACGCTTTTCGGAATGTCTCATCTCTCTCCGCCGCACTCACCACCGCTCTCGCCGGGAAATCCTCGGTCGATGAATGGATTTTCGCCTATTTCAAGGTATAGTAATCCTGATCAGTCTAAATTAAAGGGAGTTTTGAGCTATAAAGATGCACTGACCGAGCTCATGAGCTCTATTGAATCCATGAACATCGACGACGCTAATGCCACTTTAGCGGCCGCCATCCCCGCCCCTAGACCAACGCCTTGGATCGATGTTTCATCTCTTAATCCTGAAGATCAACTGCAGTTTATTCTCTCCCCTTCCACTCCAAACTTCTCCGCCGCATCGGCGAACTTATCCTGCGAGCATAAATCTAACGCCGACAATGGATGGGCCTCCACCTCCGGTCCCGATCTCGGATGGGTTAATGATCTGCTGATGTAA

mRNA sequence

ATGAGCAGTGTTTGTGCTGAGAATCAGAAATATCAGTTTCATTTTCAATTTCCTCCTTCTTCTTCTGATTTTGTTGTTTCTGAGAGGATTCCTTTTCTGAAGGATATTAACGTTCCGCCGAGGAAGCTTCTTGCGGCGCGACGAGATCAAAACGCTGAAATGTGTACTGATTCGCCGCGATTCTCGTTTGCTGTTGAATCGCTTTTGCAGAAGTTTTTGCCGTTCAATGGCGAGGATGAGGCGGAGGAGGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCTCGTCGGCGGGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGAGTTCCGGCGTGGTGGATGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAGTGTTGGCTTCATCCGGCGAGGTATCGGACTGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTCTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGGTGAGTAACTTTCAAGGCGGTGGCTCTTGTTCTTCGCCGAATAAGAAGAGTTCTAATCTCAGATCGGCCGCTGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACCTCCTCGCCGACGTCGACGCTTTTCGGAATGTCTCATCTCTCTCCGCCGCACTCACCACCGCTCTCGCCGGGAAATCCTCGGTCGATGAATGGATTTTCGCCTATTTCAAGGTATAGTAATCCTGATCAGTCTAAATTAAAGGGAGTTTTGAGCTATAAAGATGCACTGACCGAGCTCATGAGCTCTATTGAATCCATGAACATCGACGACGCTAATGCCACTTTAGCGGCCGCCATCCCCGCCCCTAGACCAACGCCTTGGATCGATGTTTCATCTCTTAATCCTGAAGATCAACTGCAGTTTATTCTCTCCCCTTCCACTCCAAACTTCTCCGCCGCATCGGCGAACTTATCCTGCGAGCATAAATCTAACGCCGACAATGGATGGGCCTCCACCTCCGGTCCCGATCTCGGATGGGTTAATGATCTGCTGATGTAA

Coding sequence (CDS)

ATGAGCAGTGTTTGTGCTGAGAATCAGAAATATCAGTTTCATTTTCAATTTCCTCCTTCTTCTTCTGATTTTGTTGTTTCTGAGAGGATTCCTTTTCTGAAGGATATTAACGTTCCGCCGAGGAAGCTTCTTGCGGCGCGACGAGATCAAAACGCTGAAATGTGTACTGATTCGCCGCGATTCTCGTTTGCTGTTGAATCGCTTTTGCAGAAGTTTTTGCCGTTCAATGGCGAGGATGAGGCGGAGGAGGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCTCGTCGGCGGGATCCTCGTCGGTTTCATTACTCCGGCACGATGTGTCCGGAGTTCCGGCGTGGTGGATGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAGTGTTGGCTTCATCCGGCGAGGTATCGGACTGAGGCTTGTAAAGATGGAAAGAACTGTAAGAGGAAGGTCTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCGCCGGTGAGTAACTTTCAAGGCGGTGGCTCTTGTTCTTCGCCGAATAAGAAGAGTTCTAATCTCAGATCGGCCGCTGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACCTCCTCGCCGACGTCGACGCTTTTCGGAATGTCTCATCTCTCTCCGCCGCACTCACCACCGCTCTCGCCGGGAAATCCTCGGTCGATGAATGGATTTTCGCCTATTTCAAGGTATAGTAATCCTGATCAGTCTAAATTAAAGGGAGTTTTGAGCTATAAAGATGCACTGACCGAGCTCATGAGCTCTATTGAATCCATGAACATCGACGACGCTAATGCCACTTTAGCGGCCGCCATCCCCGCCCCTAGACCAACGCCTTGGATCGATGTTTCATCTCTTAATCCTGAAGATCAACTGCAGTTTATTCTCTCCCCTTCCACTCCAAACTTCTCCGCCGCATCGGCGAACTTATCCTGCGAGCATAAATCTAACGCCGACAATGGATGGGCCTCCACCTCCGGTCCCGATCTCGGATGGGTTAATGATCTGCTGATGTAA

Protein sequence

MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCEHKSNADNGWASTSGPDLGWVNDLLM

Homology

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot
Match: Q9ZWA1 (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=TZF4 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.3e-82
Identity = 189/413 (45.76%), Postives = 235/413 (56.90%), Query Frame = 0


Query: 23  DFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTD-SPR-----FSFAVESLLQKFLPFN 82
           D V +E       + +PPRKLL + +   ++  +  SPR      S  + S  ++    N
Sbjct: 2   DVVCTEHQMRKPTVEIPPRKLLLSSKSFPSDSSSPRSPRKHNWNKSNKITSEHEEDNEDN 61

Query: 83  GEDEAE-----EDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRF 142
             +  E     +  DPY+SDHFRM+EFK+RRCTRSRSHDWTDCPFAHPGEKARRRDPRRF
Sbjct: 62  NRENKEYCYDSDSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRF 121

Query: 143 HYSGTMCPEFRRGG-CGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSP 202
            YSG +CPEFRRGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSP
Sbjct: 122 QYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSP 181

Query: 203 RELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSSPTSTLFG-MS 262
           R+LR+LPP  N  G  +  SP          A  N CCLFC      +SSPTSTL G +S
Sbjct: 182 RQLRVLPP-ENVSGVSASPSP----------AAKNPCCLFC------SSSPTSTLLGNLS 241

Query: 263 HL--SPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSSIESMNID 322
           HL  SP  SPP+SP N  +          S    +   G ++YKD L+EL++S++SM++ 
Sbjct: 242 HLSRSPSLSPPMSPANKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLSELVNSLDSMSLA 301

Query: 323 DANATLAAAIPAPRPTP-----------------WIDVSSLNPEDQLQFILSPSTPNFSA 382
           +A   L A+  +P  TP                  + +    P   LQF LSPSTP++  
Sbjct: 302 EA---LQASSSSPVTTPVSAAAAAFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLT 361

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot
Match: Q9FKW2 (Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=TZF5 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.4e-76
Identity = 179/389 (46.02%), Postives = 227/389 (58.35%), Query Frame = 0


Query: 36  INVPPRKLLAARRDQNAEMCTDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRM 95
           +++PPRKLL++ +  ++     SP   +      QK   ++ + E     DPY+ DHFRM
Sbjct: 16  VDIPPRKLLSSAKSPSS---VSSPLRDYKE----QKDYCYDSDSE-----DPYAGDHFRM 75

Query: 96  YEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEF-RRGGCGRGDGCEF 155
           YEFK+RRCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CPEF R G C RGD C F
Sbjct: 76  YEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGF 135

Query: 156 AHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPP-VSNFQGGGSCSSPNK 215
           AHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP   N   GG   SP+ 
Sbjct: 136 AHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSS 195

Query: 216 KSSNLRSAAGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPI 275
             +++ S   +N CCLFC      + SPTSTL  +S  SP  SPPLSP +    + FS +
Sbjct: 196 SPASVLSNK-NNRCCLFC------SHSPTSTLLNLSR-SPSSSPPLSPAD--KADAFSRL 255

Query: 276 SRYSNPDQSKL---KGVLSYKDALTELMSSIESMNIDD----ANATLAAAIPAPRPTPWI 335
           SR      ++L      LS  +AL    SS  +M I      A++ L++     R  PW+
Sbjct: 256 SRRRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWL 315

Query: 336 DVS----SLNPEDQLQFILSP-STPNF----------------------------SAASA 383
           DV      L     L+F LSP STP++                             AA+A
Sbjct: 316 DVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAA 375

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-58
Identity = 122/215 (56.74%), Postives = 141/215 (65.58%), Query Frame = 0


Query: 69  LQKFLPFN----GEDEAEEDG-----DPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHP 128
           L+ +LP N     EDE E        D Y+ D FRMYEFKVRRC R RSHDWT+CPFAHP
Sbjct: 45  LRHYLPSNEAAAAEDEEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHP 104

Query: 129 GEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNC 188
           GEKARRRDPRR+ YSGT CP+FR+GGC RGD CEFAHGVFECWLHPARYRT+ CKDG  C
Sbjct: 105 GEKARRRDPRRYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTAC 164

Query: 189 KRKVCFFAHSPRELRLLPPV----SNFQ------GGGSCSSPNKKS---SNLRSAAGSNH 248
           +R+VCFFAH+P +LR+LPP     SN        G G+ +SP  +S   S LR  A  ++
Sbjct: 165 RRRVCFFAHTPDQLRVLPPSQQQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESY 224

Query: 249 CCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSP 262
                      +SSPTSTL       P  SPPLSP
Sbjct: 225 L-----TKSIMSSSPTSTLVSPPRSPPSESPPLSP 254

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.4e-58
Identity = 126/228 (55.26%), Postives = 149/228 (65.35%), Query Frame = 0


Query: 65  VESLLQKFLPFN----GEDEAEEDG------DPYSSDHFRMYEFKVRRCTRSRSHDWTDC 124
           V + L+ +LP N    G DE EE        D Y+ D FRMYEFKVRRC R RSHDWT+C
Sbjct: 39  VIAALRDYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTEC 98

Query: 125 PFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACK 184
           PFAHPGEKARRRDPR++HYSGT CP+FR+GGC RGD CE+AHGVFECWLHPARYRT+ CK
Sbjct: 99  PFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCK 158

Query: 185 DGKNCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKS---SNLRSAAGSNHCCLFC 244
           DG  C+R+VCFFAH+P +LR+L P          SSP  +S   S LR  A  ++     
Sbjct: 159 DGTACRRRVCFFAHTPDQLRVL-PAQQSSPRSVASSPLAESYDGSPLRRQAFESYL---- 218

Query: 245 HCGGAATSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNP 280
                 +SSPTSTL     +SPP SPP S   P S +G + I R S P
Sbjct: 219 -TKTIMSSSPTSTL-----MSPPKSPP-SESPPLSPDGAAAIRRGSWP 254

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-57
Identity = 97/140 (69.29%), Postives = 112/140 (80.00%), Query Frame = 0


Query: 69  LQKFLPFNGEDEAEEDGDP-----------YSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 128
           LQ++LP N   E + D DP           Y+ DHFRMYEFKVRRC R RSHDWT+CP+A
Sbjct: 47  LQRYLPSN---EPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYA 106

Query: 129 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 188
           HPGEKARRRDPR+FHYSGT CPEFR+G C RGD CEF+HGVFECWLHPARYRT+ CKDG 
Sbjct: 107 HPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGG 166

Query: 189 NCKRKVCFFAHSPRELRLLP 198
           NC+R+VCFFAHSP ++R+LP
Sbjct: 167 NCRRRVCFFAHSPDQIRVLP 183

[Close]

BLAST of Cp4.1LG04g02750 vs. NCBI nr
Match: XP_023531320.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 804 bits (2076), Expect = 3.19e-294
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 60
           MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR
Sbjct: 1   MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 60

Query: 61  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 120
           FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG
Sbjct: 61  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 120

Query: 121 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180
           EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK
Sbjct: 121 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180

Query: 181 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSS 240
           RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSS
Sbjct: 181 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSS 240

Query: 241 PTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSS 300
           PTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSS
Sbjct: 241 PTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSS 300

Query: 301 IESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCEHK 360
           IESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCEHK
Sbjct: 301 IESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCEHK 360

Query: 361 SNADNGWASTSGPDLGWVNDLLM 383
           SNADNGWASTSGPDLGWVNDLLM
Sbjct: 361 SNADNGWASTSGPDLGWVNDLLM 383

[Close]

BLAST of Cp4.1LG04g02750 vs. NCBI nr
Match: XP_022989282.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 792 bits (2046), Expect = 1.34e-289
Identity = 379/386 (98.19%), Postives = 382/386 (98.96%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPP---SSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTD 60
           MSSVCAENQKYQFHFQFPP   SSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMC+D
Sbjct: 1   MSSVCAENQKYQFHFQFPPPPSSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSD 60

Query: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120
           SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA
Sbjct: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120

Query: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180
           HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK
Sbjct: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180

Query: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240
           NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA
Sbjct: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240

Query: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300
           TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL
Sbjct: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300

Query: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSC 360
           MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPED+LQFILSPSTPN SAASANLSC
Sbjct: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDELQFILSPSTPNISAASANLSC 360

Query: 361 EHKSNADNGWASTSGPDLGWVNDLLM 383
           EHK+NADNGWASTSGPDLGWVNDLLM
Sbjct: 361 EHKTNADNGWASTSGPDLGWVNDLLM 386

[Close]

BLAST of Cp4.1LG04g02750 vs. NCBI nr
Match: XP_022930620.1 (zinc finger CCCH domain-containing protein 2-like [Cucurbita moschata] >KAG7022951.1 Zinc finger CCCH domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 788 bits (2035), Expect = 5.91e-288
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSS--DFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDS 60
           MSSVCAENQKYQFHFQFPPSSS  DFVVSERIPFLKDINVPPRKLLAARRDQNAEMC+DS
Sbjct: 1   MSSVCAENQKYQFHFQFPPSSSTSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSDS 60

Query: 61  PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH 120
           PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH
Sbjct: 61  PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH 120

Query: 121 PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN 180
           PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN
Sbjct: 121 PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN 180

Query: 181 CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT 240
           CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT
Sbjct: 181 CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT 240

Query: 241 SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM 300
           SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM
Sbjct: 241 SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM 300

Query: 301 SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCE 360
           SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPN SAA ANL+CE
Sbjct: 301 SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNISAA-ANLTCE 360

Query: 361 HKSNADNGWASTSGPDLGWVNDLLM 383
           HKSNADNGWASTSGPDLGWVNDLLM
Sbjct: 361 HKSNADNGWASTSGPDLGWVNDLLM 384

[Close]

BLAST of Cp4.1LG04g02750 vs. NCBI nr
Match: KAG6589252.1 (Zinc finger CCCH domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 783 bits (2022), Expect = 5.67e-286
Identity = 379/386 (98.19%), Postives = 380/386 (98.45%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSS---DFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTD 60
           MSSVCAENQKYQFHFQFPPSSS   DFVVSERIPFLKDINVPPRKLLAARRDQNAEMC+D
Sbjct: 1   MSSVCAENQKYQFHFQFPPSSSSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSD 60

Query: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120
           SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA
Sbjct: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120

Query: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180
           HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK
Sbjct: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180

Query: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240
           NCKRKVCFFAHSPRELRLLPPVSNFQGGG CSSPNKKSSNLRSAAGSNHCCLFCHCGGAA
Sbjct: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGG-CSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240

Query: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300
           TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL
Sbjct: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300

Query: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSC 360
           MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPN SAA ANLSC
Sbjct: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNISAA-ANLSC 360

Query: 361 EHKSNADNGWASTSGPDLGWVNDLLM 383
           EHKSNADNGWASTSGPDLGWVNDLLM
Sbjct: 361 EHKSNADNGWASTSGPDLGWVNDLLM 384

[Close]

BLAST of Cp4.1LG04g02750 vs. NCBI nr
Match: XP_038887520.1 (zinc finger CCCH domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 663 bits (1710), Expect = 2.24e-238
Identity = 335/391 (85.68%), Postives = 345/391 (88.24%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFP-PSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSP 60
           MSSVC E  K+QF FQF  PSSS    S    FLKDINVPPRKLLAA R +N EMC+DSP
Sbjct: 1   MSSVCTEQHKFQFPFQFQFPSSSSSCSSS---FLKDINVPPRKLLAAVRRENGEMCSDSP 60

Query: 61  RFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHP 120
           RFSFAVESLLQKFLPFNGEDE EEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHP
Sbjct: 61  RFSFAVESLLQKFLPFNGEDEVEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHP 120

Query: 121 GEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNC 180
           GEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNC
Sbjct: 121 GEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNC 180

Query: 181 KRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSA-AGSNHCCLFCHCGGAA- 240
           KRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNK++S LRSA AGSNHCCL CHCGGAA 
Sbjct: 181 KRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKRNSTLRSASAGSNHCCLLCHCGGAAA 240

Query: 241 -TSSPTSTLFGMSHLSPPHSPPLSPGNPRS-MNGFSPISRYSNPDQSKLKGVLSYKDALT 300
            TSSPTSTLFGMSHLSPP SPP+SPG PRS MNGFSPISRY+NPDQSK  GVLSYKDALT
Sbjct: 241 ATSSPTSTLFGMSHLSPPLSPPVSPGKPRSSMNGFSPISRYNNPDQSKFNGVLSYKDALT 300

Query: 301 ELMSSIESMNIDDANATLAAAIPA--PRPT-PWIDVSSLNPEDQLQFILSPSTPNFSAAS 360
           ELMSSIESMNIDDANATLAAA  A  PR T PWIDVSSLN EDQLQF+LSPSTPN S AS
Sbjct: 301 ELMSSIESMNIDDANATLAAAAAAASPRQTIPWIDVSSLNNEDQLQFVLSPSTPNVSTAS 360

Query: 361 ANLSCEHKSNADNGWASTSGPDLGWVNDLLM 383
            N   E+K N +NGW S S PDLGWVNDLLM
Sbjct: 361 MNFPVENKGN-NNGWTSASDPDLGWVNDLLM 387

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL
Match: A0A6J1JFD9 (zinc finger CCCH domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486401 PE=4 SV=1)

HSP 1 Score: 792 bits (2046), Expect = 6.50e-290
Identity = 379/386 (98.19%), Postives = 382/386 (98.96%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPP---SSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTD 60
           MSSVCAENQKYQFHFQFPP   SSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMC+D
Sbjct: 1   MSSVCAENQKYQFHFQFPPPPSSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSD 60

Query: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120
           SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA
Sbjct: 61  SPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 120

Query: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180
           HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK
Sbjct: 121 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 180

Query: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240
           NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA
Sbjct: 181 NCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAA 240

Query: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300
           TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL
Sbjct: 241 TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTEL 300

Query: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSC 360
           MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPED+LQFILSPSTPN SAASANLSC
Sbjct: 301 MSSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDELQFILSPSTPNISAASANLSC 360

Query: 361 EHKSNADNGWASTSGPDLGWVNDLLM 383
           EHK+NADNGWASTSGPDLGWVNDLLM
Sbjct: 361 EHKTNADNGWASTSGPDLGWVNDLLM 386

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL
Match: A0A6J1EXC0 (zinc finger CCCH domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437026 PE=4 SV=1)

HSP 1 Score: 788 bits (2035), Expect = 2.86e-288
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSS--DFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDS 60
           MSSVCAENQKYQFHFQFPPSSS  DFVVSERIPFLKDINVPPRKLLAARRDQNAEMC+DS
Sbjct: 1   MSSVCAENQKYQFHFQFPPSSSTSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCSDS 60

Query: 61  PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH 120
           PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH
Sbjct: 61  PRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH 120

Query: 121 PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN 180
           PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN
Sbjct: 121 PGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKN 180

Query: 181 CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT 240
           CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT
Sbjct: 181 CKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAAT 240

Query: 241 SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM 300
           SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM
Sbjct: 241 SSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELM 300

Query: 301 SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCE 360
           SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPN SAA ANL+CE
Sbjct: 301 SSIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNISAA-ANLTCE 360

Query: 361 HKSNADNGWASTSGPDLGWVNDLLM 383
           HKSNADNGWASTSGPDLGWVNDLLM
Sbjct: 361 HKSNADNGWASTSGPDLGWVNDLLM 384

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL
Match: A0A6J1GKP3 (zinc finger CCCH domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111454880 PE=4 SV=1)

HSP 1 Score: 617 bits (1591), Expect = 5.12e-221
Identity = 307/384 (79.95%), Postives = 322/384 (83.85%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 60
           MSSVCAE QK+QF FQ PPS S  +                       D N EMC+DSPR
Sbjct: 1   MSSVCAEEQKFQFQFQLPPSCSSII----------------------EDINGEMCSDSPR 60

Query: 61  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 120
           FSFAVESLLQKFLPFNGED AEEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPG
Sbjct: 61  FSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 120

Query: 121 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180
           EKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGKNCK
Sbjct: 121 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180

Query: 181 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAA-GSNHCCLFCHCGGAATS 240
           RKVCFFAHSPRELRLLPPVSNFQGG SCSSPNK+SS LRSAA GSNH CLFCHCGGAATS
Sbjct: 181 RKVCFFAHSPRELRLLPPVSNFQGG-SCSSPNKRSSTLRSAAAGSNHGCLFCHCGGAATS 240

Query: 241 SPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMS 300
           SPTSTL GMSHLSPP SPPLSP  P+S+NGFSP SRY NPD SKL GV+SYKD++TELM+
Sbjct: 241 SPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSPFSRY-NPDPSKLNGVISYKDSMTELMN 300

Query: 301 SIESMNIDDANATLAAAIPAPRPTPWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCEH 360
           SIESMNID+ NATLAA+    R  PWIDVSSLN EDQLQF+LSPSTPN SAAS N S  +
Sbjct: 301 SIESMNIDELNATLAASASRQR-IPWIDVSSLNTEDQLQFVLSPSTPNGSAASVNFSVNN 359

Query: 361 KSNADNGWASTSGPDLGWVNDLLM 383
           K NADNGWAS S PDLGWVNDLLM
Sbjct: 361 KGNADNGWASASDPDLGWVNDLLM 359

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL
Match: A0A6J1HVJ3 (zinc finger CCCH domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468228 PE=4 SV=1)

HSP 1 Score: 606 bits (1562), Expect = 1.55e-216
Identity = 308/389 (79.18%), Postives = 326/389 (83.80%), Query Frame = 0


Query: 1   MSSVCAENQKYQFHFQFPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 60
           MSSVCAE QK+QF FQ P S S          L+DIN               EMC+DSPR
Sbjct: 1   MSSVCAEEQKFQFQFQLPSSCSSI--------LEDIN--------------GEMCSDSPR 60

Query: 61  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 120
           FSFAVESLLQKFLPFNGED AEEDGDPYSSDHFRMYEFKV RCTRSRSHDWTDCPFAHPG
Sbjct: 61  FSFAVESLLQKFLPFNGEDVAEEDGDPYSSDHFRMYEFKVWRCTRSRSHDWTDCPFAHPG 120

Query: 121 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180
           EKARRRDPRRFHYSGTMCP+FRRGGC RGDGCEFAHGVFECWLHPARYRTEACKDGKNCK
Sbjct: 121 EKARRRDPRRFHYSGTMCPDFRRGGCDRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 180

Query: 181 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKKSSNLRSAA-GSNHCCLFCHCGGAATS 240
           RKVCFFAHSPRELRLLPP+SNFQGG SCSSPNK++S LRSAA GSNH CLFCHCGGAATS
Sbjct: 181 RKVCFFAHSPRELRLLPPMSNFQGG-SCSSPNKRNSTLRSAAAGSNHGCLFCHCGGAATS 240

Query: 241 SPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMS 300
           SPTSTL GMSHLSPP SPPLSP  P+S+NGFSPISRY NPD SKL GV+SYKD++TELM+
Sbjct: 241 SPTSTLIGMSHLSPPLSPPLSPVKPQSLNGFSPISRY-NPDPSKLNGVISYKDSMTELMN 300

Query: 301 SIESMNIDDANATLAAAIPAPRPT-PWIDVSSLNPEDQLQFILSPSTPNFSAASANLSCE 360
           SIESMNID+ NATLAA+  A R T PWIDVSSLN E+QLQF+LSPSTPN SAAS N S  
Sbjct: 301 SIESMNIDELNATLAAS--ASRQTIPWIDVSSLNTEEQLQFVLSPSTPNVSAASVNFSVN 360

Query: 361 HKSNADNGWASTSG----PDLGWVNDLLM 383
           +K NADNGWAS S     PDLGWVNDLLM
Sbjct: 361 NKGNADNGWASASASASDPDLGWVNDLLM 363

[Close]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL
Match: A0A0A0K2E3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049250 PE=4 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 2.75e-209
Identity = 314/401 (78.30%), Postives = 328/401 (81.80%), Query Frame = 0


Query: 2   SSVCAENQKYQFHFQ-FPPSSSDFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTDSPR 61
           SSVCA++Q  +  F  F  SSS    S    FL  IN+PP K        + EM +DSPR
Sbjct: 3   SSVCADHQHNKSPFSSFQSSSSSSSCSSS--FLHHINLPPTK-------NHLEMSSDSPR 62

Query: 62  FSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 121
           FS+AVESLLQKFLPFNGEDE EEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG
Sbjct: 63  FSYAVESLLQKFLPFNGEDELEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 122

Query: 122 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 181
           EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK
Sbjct: 123 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 182

Query: 182 RKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKK--SSNLRS---AAGSNHCCLFCHCGG 241
           RKVCFFAHSPRELRLLPPVSNFQ G SCSSPN K  SS+LRS   A+ SNHCCLFCHCGG
Sbjct: 183 RKVCFFAHSPRELRLLPPVSNFQTG-SCSSPNNKRSSSSLRSPSTASASNHCCLFCHCGG 242

Query: 242 AA-TSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDAL 301
           AA TSSPTSTLFGMSHLSPPHSPP SPG P  +NGFSPISRY NPDQSKL GVLSYKDAL
Sbjct: 243 AAVTSSPTSTLFGMSHLSPPHSPPHSPGKP--INGFSPISRY-NPDQSKLNGVLSYKDAL 302

Query: 302 TELMSSIESMNIDDANATLAAAIPA---PRPT-PWIDVSSLNPEDQLQFILSPSTPNFSA 361
           TELMSSIESMN+DDANATLAAA  A   PR T PWIDVSSLN EDQLQF+LSPSTPN S 
Sbjct: 303 TELMSSIESMNMDDANATLAAAAAAASGPRQTIPWIDVSSLNNEDQLQFVLSPSTPNVST 362

Query: 362 ASANLSCEHKSNADNGWAST--------SGPDLGWVNDLLM 383
           AS   S E+ +N  NGWAS         S PDLGWVNDLLM
Sbjct: 363 ASVKFSVENNNN--NGWASAYASASTSASDPDLGWVNDLLM 388

[Close]

BLAST of Cp4.1LG04g02750 vs. TAIR 10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-83
Identity = 189/413 (45.76%), Postives = 235/413 (56.90%), Query Frame = 0


Query: 23  DFVVSERIPFLKDINVPPRKLLAARRDQNAEMCTD-SPR-----FSFAVESLLQKFLPFN 82
           D V +E       + +PPRKLL + +   ++  +  SPR      S  + S  ++    N
Sbjct: 2   DVVCTEHQMRKPTVEIPPRKLLLSSKSFPSDSSSPRSPRKHNWNKSNKITSEHEEDNEDN 61

Query: 83  GEDEAE-----EDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRF 142
             +  E     +  DPY+SDHFRM+EFK+RRCTRSRSHDWTDCPFAHPGEKARRRDPRRF
Sbjct: 62  NRENKEYCYDSDSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRF 121

Query: 143 HYSGTMCPEFRRGG-CGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSP 202
            YSG +CPEFRRGG C RGD CEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSP
Sbjct: 122 QYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSP 181

Query: 203 RELRLLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCGGAATSSPTSTLFG-MS 262
           R+LR+LPP  N  G  +  SP          A  N CCLFC      +SSPTSTL G +S
Sbjct: 182 RQLRVLPP-ENVSGVSASPSP----------AAKNPCCLFC------SSSPTSTLLGNLS 241

Query: 263 HL--SPPHSPPLSPGNPRSMNGFSPISRYSNPDQSKLKGVLSYKDALTELMSSIESMNID 322
           HL  SP  SPP+SP N  +          S    +   G ++YKD L+EL++S++SM++ 
Sbjct: 242 HLSRSPSLSPPMSPANKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLSELVNSLDSMSLA 301

Query: 323 DANATLAAAIPAPRPTP-----------------WIDVSSLNPEDQLQFILSPSTPNFSA 382
           +A   L A+  +P  TP                  + +    P   LQF LSPSTP++  
Sbjct: 302 EA---LQASSSSPVTTPVSAAAAAFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLT 361

[Close]

BLAST of Cp4.1LG04g02750 vs. TAIR 10
Match: AT5G44260.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 285.4 bits (729), Expect = 6.7e-77
Identity = 179/389 (46.02%), Postives = 227/389 (58.35%), Query Frame = 0


Query: 36  INVPPRKLLAARRDQNAEMCTDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRM 95
           +++PPRKLL++ +  ++     SP   +      QK   ++ + E     DPY+ DHFRM
Sbjct: 16  VDIPPRKLLSSAKSPSS---VSSPLRDYKE----QKDYCYDSDSE-----DPYAGDHFRM 75

Query: 96  YEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEF-RRGGCGRGDGCEF 155
           YEFK+RRCTRSRSHDWTDCPF+HPGEKARRRDPRRFHY+G +CPEF R G C RGD C F
Sbjct: 76  YEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGF 135

Query: 156 AHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPP-VSNFQGGGSCSSPNK 215
           AHGVFECWLHP+RYRTEACKDGK+CKRKVCFFAHSPR+LR+LPP   N   GG   SP+ 
Sbjct: 136 AHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSS 195

Query: 216 KSSNLRSAAGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGNPRSMNGFSPI 275
             +++ S   +N CCLFC      + SPTSTL  +S  SP  SPPLSP +    + FS +
Sbjct: 196 SPASVLSNK-NNRCCLFC------SHSPTSTLLNLSR-SPSSSPPLSPAD--KADAFSRL 255

Query: 276 SRYSNPDQSKL---KGVLSYKDALTELMSSIESMNIDD----ANATLAAAIPAPRPTPWI 335
           SR      ++L      LS  +AL    SS  +M I      A++ L++     R  PW+
Sbjct: 256 SRRRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWL 315

Query: 336 DVS----SLNPEDQLQFILSP-STPNF----------------------------SAASA 383
           DV      L     L+F LSP STP++                             AA+A
Sbjct: 316 DVGDRDLQLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAA 375

[Close]

BLAST of Cp4.1LG04g02750 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-58
Identity = 97/140 (69.29%), Postives = 112/140 (80.00%), Query Frame = 0


Query: 69  LQKFLPFNGEDEAEEDGDP-----------YSSDHFRMYEFKVRRCTRSRSHDWTDCPFA 128
           LQ++LP N   E + D DP           Y+ DHFRMYEFKVRRC R RSHDWT+CP+A
Sbjct: 47  LQRYLPSN---EPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYA 106

Query: 129 HPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGK 188
           HPGEKARRRDPR+FHYSGT CPEFR+G C RGD CEF+HGVFECWLHPARYRT+ CKDG 
Sbjct: 107 HPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGG 166

Query: 189 NCKRKVCFFAHSPRELRLLP 198
           NC+R+VCFFAHSP ++R+LP
Sbjct: 167 NCRRRVCFFAHSPDQIRVLP 183

[Close]

BLAST of Cp4.1LG04g02750 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-57
Identity = 94/136 (69.12%), Postives = 108/136 (79.41%), Query Frame = 0


Query: 69  LQKFLPFNGEDE--------AEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPG 128
           LQ++LP N  D          +   D YS DHFRMY+FKVRRC R RSHDWT+CP+AHPG
Sbjct: 48  LQRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPG 107

Query: 129 EKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCK 188
           EKARRRDPR++HYSGT CP+FR+GGC +GD CEFAHGVFECWLHPARYRT+ CKDG NC 
Sbjct: 108 EKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167

Query: 189 RKVCFFAHSPRELRLL 197
           RK+CFFAHSP +LR L
Sbjct: 168 RKICFFAHSPDQLRFL 183

[Close]

BLAST of Cp4.1LG04g02750 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 218.4 bits (555), Expect = 1.0e-56
Identity = 120/250 (48.00%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 30  IPFLKDINVPPRKLLAARRDQNAEMCTDSPRF------SFAVESLLQKFLPFN------- 89
           IP    IN P   + +     N     D P        SFA    L ++LP N       
Sbjct: 16  IPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFA---SLFRYLPSNELTNDSD 75

Query: 90  --GEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYS 149
               DE+    D +SSD FR+YEFK+RRC R RSHDWT+CPFAHPGEKARRRDPR+FHYS
Sbjct: 76  SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYS 135

Query: 150 GTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELR 209
           GT CPEFR+G C RGD CEF+HGVFECWLHP+RYRT+ CKDG +C+R++CFFAH+  +LR
Sbjct: 136 GTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 195

Query: 210 LLPPVSNFQGGGSCSSPNKKSSNLRSAAGSNHCCLFCHCG---GAATSSPTSTLFGMSHL 262
           +LP                             C L    G   G AT SPTS L   S  
Sbjct: 196 VLP-----------------------------CSLDPDLGFFSGLAT-SPTSILVSPSFS 232

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g02750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWA1	2.3e-82	45.76	Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FKW2	9.4e-76	46.02	Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L4N4	1.0e-58	56.74	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FU27	1.4e-58	55.26	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
O82199	2.0e-57	69.29	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG04g02750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531320.1	3.19e-294	100.00	zinc finger CCCH domain-containing protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989282.1	1.34e-289	98.19	zinc finger CCCH domain-containing protein 2-like [Cucurbita maxima]	[more]
XP_022930620.1	5.91e-288	98.44	zinc finger CCCH domain-containing protein 2-like [Cucurbita moschata] >KAG70229...	[more]
KAG6589252.1	5.67e-286	98.19	Zinc finger CCCH domain-containing protein 2, partial [Cucurbita argyrosperma su...	[more]
XP_038887520.1	2.24e-238	85.68	zinc finger CCCH domain-containing protein 2-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g02750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFD9	6.50e-290	98.19	zinc finger CCCH domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EXC0	2.86e-288	98.44	zinc finger CCCH domain-containing protein 2-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1GKP3	5.12e-221	79.95	zinc finger CCCH domain-containing protein 2-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HVJ3	1.55e-216	79.18	zinc finger CCCH domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0K2E3	2.75e-209	78.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049250 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g02750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03790.1	1.6e-83	45.76	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G44260.1	6.7e-77	46.02	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G19810.1	1.4e-58	69.29	CCCH-type zinc finger family protein	[more]
AT4G29190.1	1.5e-57	69.12	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	1.0e-56	48.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 132..158 e-value: 0.054 score: 22.6 coord: 167..190 e-value: 1.6 score: 14.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 133..159 score: 11.58202
None	No IPR available	GENE3D	3.30.1370.210		coord: 132..195 e-value: 3.7E-9 score: 38.5
None	No IPR available	PANTHER	PTHR14493:SF90	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2	coord: 35..382
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 35..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g02750.1	Cp4.1LG04g02750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding